Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0018900 Salix brachista HOM05D005955 ORTHO05D007633 3.3e-144 515.0 252 100.0
Potri.001G025601 Populus trichocarpa HOM05D005955 ORTHO05D007633 1.3e-137 493.0 252 95.6
Manes.11G004000 Manihot esculenta HOM05D005955 ORTHO05D007633 3.2e-115 418.7 252 81.7
TWI63G0596 Tripterygium wilfordii HOM05D005955 ORTHO05D007633 6.6e-113 411.0 250 79.2
QL04p014297 Quercus lobata HOM05D005955 ORTHO05D007633 8.7e-113 410.6 250 78.4
Haze_03068 Corylus avellana HOM05D005955 ORTHO05D007633 1.2e-111 406.8 249 79.9
GSVIVG01000659001 Vitis vinifera HOM05D005955 ORTHO05D007633 1.1e-110 403.7 255 78.0
Duzib128G0282 Durio zibethinus HOM05D005955 ORTHO05D007633 4.0e-110 401.7 256 77.7
CiPaw.13G012200 Carya illinoinensis HOM05D005955 ORTHO05D007633 1.5e-109 399.8 247 77.7
Thecc.10G166400 Theobroma cacao HOM05D005955 ORTHO05D007633 3.4e-109 398.7 260 75.8
Gohir.D04G014500 Gossypium hirsutum HOM05D005955 ORTHO05D007633 7.6e-109 397.5 250 78.4
Eucgr.G03245 Eucalyptus grandis HOM05D005955 ORTHO05D007633 1.3e-108 396.7 250 78.4
THA.LOC104824190 Tarenaya hassleriana HOM05D005955 ORTHO05D007633 1.9e-107 392.9 262 75.2
Dinv09262 Davidia involucrata HOM05D005955 ORTHO05D007633 1.2e-106 390.2 249 77.5
Atru.chr12.1378 Acer truncatum HOM05D005955 ORTHO05D007633 2.1e-106 389.4 260 75.4
Ciclev10005678m.g Citrus clementina HOM05D005955 ORTHO05D007633 3.5e-106 388.7 251 75.3
MD02G1290300 Malus domestica HOM05D005955 ORTHO05D007633 3.5e-106 388.7 244 76.2
Hma1.2p1_1251F.1_g270440 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 1.0e-105 387.1 247 77.3
CSS0025918 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 1.7e-105 386.3 253 75.5
Ca_27127_v3 Cicer arietinum L. HOM05D005955 ORTHO05D007633 1.7e-105 386.3 262 73.3
FvH4_7g02750 Fragaria vesca HOM05D005955 ORTHO05D007633 2.3e-105 386.0 247 76.5
FAN06G1602 Fragaria x ananassa HOM05D005955 ORTHO05D007633 2.3e-105 386.0 247 76.5
Gohir.A05G401400 Gossypium hirsutum HOM05D005955 ORTHO05D007633 3.9e-105 385.2 246 76.8
FAN10G0293 Fragaria x ananassa HOM05D005955 ORTHO05D007633 5.1e-105 384.8 247 76.1
Glyma.11G154400 Glycine max HOM05D005955 ORTHO05D007633 6.6e-105 384.4 251 75.3
Cpa.g.sc223.13 Carica papaya HOM05D005955 ORTHO05D007633 8.7e-105 384.0 237 79.7
RcHm_v2.0_Chr1g0322011 Rosa chinensis HOM05D005955 ORTHO05D007633 8.7e-105 384.0 240 78.8
arahy.Tifrunner.gnm1.ann1.RGX0XE Arachis hypogaea HOM05D005955 ORTHO05D007633 1.1e-104 383.6 256 73.0
Gorai.012G017000 Gossypium raimondii HOM05D005955 ORTHO05D007633 1.9e-104 382.9 277 70.8
Prupe.2G032200 Prunus persica HOM05D005955 ORTHO05D007633 1.9e-104 382.9 234 79.5
vmacro12691 Vaccinium macrocarpon HOM05D005955 ORTHO05D007633 3.3e-104 382.1 252 75.4
Aqoxy2G00337 Aquilegia oxysepala HOM05D005955 ORTHO05D007633 5.6e-104 381.3 255 73.7
Rhsim01G0123700 Rhododendron simsii HOM05D005955 ORTHO05D007633 5.6e-104 381.3 251 74.5
MBI13_g36285_MAGBIO Magnolia biondii HOM05D005955 ORTHO05D007633 7.3e-104 380.9 247 74.5
TAR369G0753 Trochodendron aralioides HOM05D005955 ORTHO05D007633 9.6e-104 380.6 253 74.3
FAN03G1179 Fragaria x ananassa HOM05D005955 ORTHO05D007633 1.3e-103 380.2 246 75.2
Gohir.D04G013700 Gossypium hirsutum HOM05D005955 ORTHO05D007633 1.6e-103 379.8 281 69.0
Cc02_g29700 Coffea canephora HOM05D005955 ORTHO05D007633 2.8e-103 379.0 251 75.3
Phvul.005G029600 Phaseolus vulgaris HOM05D005955 ORTHO05D007633 6.2e-103 377.9 249 73.1
CsaV3_5G036650 Cucumis sativus L. HOM05D005955 ORTHO05D007633 1.1e-102 377.1 250 74.8
Psat5g219280 Pisum sativum HOM05D005955 ORTHO05D007633 1.8e-102 376.3 251 73.7
Medtr3g017610 Medicago truncatula HOM05D005955 ORTHO05D007633 2.4e-102 375.9 247 73.7
BcaB02g08444 Brassica carinata HOM05D005955 ORTHO05D007633 3.1e-102 375.6 253 73.1
Lalb_Chr04g0264041 Lupinus albus HOM05D005955 ORTHO05D007633 4.0e-102 375.2 255 72.9
Thhalv10010628m.g Eutrema salsugineum HOM05D005955 ORTHO05D007633 6.9e-102 374.4 255 72.2
ClCG05G026720 Citrullus lanatus HOM05D005955 ORTHO05D007633 1.2e-101 373.6 250 74.4
Aa31sc434G20 Aethionema arabicum HOM05D005955 ORTHO05D007633 1.5e-101 373.2 243 73.3
A04p05350 Brassica napus HOM05D005955 ORTHO05D007633 2.0e-101 372.9 258 71.3
Sp5g07940 Schrenkiella parvula HOM05D005955 ORTHO05D007633 2.0e-101 372.9 258 70.9
Cfa010889 Carpinus fangiana HOM05D005955 ORTHO05D007633 2.6e-101 372.5 222 82.0
C08p29670 Brassica napus HOM05D005955 ORTHO05D007633 3.4e-101 372.1 257 72.4
BolC8t50576H Brassica oleracea HOM05D005955 ORTHO05D007633 3.4e-101 372.1 257 72.4
Sopen11g001560 Solanum pennellii HOM05D005955 ORTHO05D007633 3.4e-101 372.1 249 73.5
VMungo1080G1708 Vigna mungo HOM05D005955 ORTHO05D007633 7.6e-101 370.9 229 77.7
PGR031G3892 Punica granatum HOM05D005955 ORTHO05D007633 9.9e-101 370.5 245 73.9
Actinidia02255 Actinidia chinensis HOM05D005955 ORTHO05D007633 1.3e-100 370.2 254 74.0
BraA04t16235Z Brassica rapa HOM05D005955 ORTHO05D007633 1.3e-100 370.2 257 72.0
CANSAT56G4499 Cannabis sativa HOM05D005955 ORTHO05D007633 4.9e-100 368.2 249 74.3
Peaxi162Scf01732g00026 Petunia axillaris HOM05D005955 ORTHO05D007633 6.4e-100 367.9 249 73.5
AL5G35530 Arabidopsis lyrata HOM05D005955 ORTHO05D007633 8.4e-100 367.5 254 70.9
BcaB01g00190 Brassica carinata HOM05D005955 ORTHO05D007633 8.4e-100 367.5 257 70.8
PGSC0003DMG401003979 Solanum tuberosum HOM05D005955 ORTHO05D007633 1.1e-99 367.1 249 72.7
HanXRQChr11g0341831 Helianthus annuus HOM05D005955 ORTHO05D007633 1.4e-99 366.7 237 76.4
Nitab4.5_0001681g0050 Nicotiana tabacum HOM05D005955 ORTHO05D007633 1.9e-99 366.3 249 73.1
A09p47410 Brassica napus HOM05D005955 ORTHO05D007633 3.2e-99 365.5 255 70.2
Sed0001833 Sechium edule HOM05D005955 ORTHO05D007633 3.2e-99 365.5 229 76.9
Carub.0005s2110 Capsella rubella HOM05D005955 ORTHO05D007633 4.2e-99 365.2 251 71.7
Solyc11g005590.1 Solanum lycopersicum HOM05D005955 ORTHO05D007633 4.2e-99 365.2 247 71.7
AUR62026845 Chenopodium quinoa HOM05D005955 ORTHO05D007633 2.1e-98 362.8 255 71.8
AT3G54480 Arabidopsis thaliana HOM05D005955 ORTHO05D007633 2.7e-98 362.5 256 69.5
BcaC02g09066 Brassica carinata HOM05D005955 ORTHO05D007633 2.7e-98 362.5 258 69.0
C04p38040 Brassica napus HOM05D005955 ORTHO05D007633 2.7e-98 362.5 258 69.0
EL10Ac2g02824 Beta vulgaris HOM05D005955 ORTHO05D007633 3.5e-98 362.1 255 72.5
ECA248G0357 Erigeron canadensis HOM05D005955 ORTHO05D007633 4.6e-98 361.7 247 72.9
TPR.G17810 Trifolium pratense HOM05D005955 ORTHO05D007633 1.9e-96 356.3 266 67.7
COL.COLO4_21458 Corchorus olitorius HOM05D005955 ORTHO05D007633 1.6e-95 353.2 211 82.0
SGA_v2.0_scaffold232G43514 Striga asiatica HOM05D005955 ORTHO05D007633 4.8e-95 351.7 254 69.7
Migut.N01830 Erythranthe guttata HOM05D005955 ORTHO05D007633 4.0e-94 348.6 251 70.1
Migut.O00720 Erythranthe guttata HOM05D005955 ORTHO05D007633 2.6e-93 345.9 251 69.7
unitig_8.g4774 Utricularia gibba HOM05D005955 ORTHO05D007633 5.8e-93 344.7 234 72.6
Lsat_1_v5_gn_1_114801 Lactuca sativa HOM05D005955 ORTHO05D007633 9.9e-93 344.0 249 71.5
HPP92_025011 Vanilla planifolia HOM05D005955 ORTHO05D007633 1.7e-92 343.2 239 69.9
ATR0075G002 Amborella trichopoda HOM05D005955 ORTHO05D007633 4.9e-92 341.7 252 67.5
MSTRG.5061 Avicennia marina HOM05D005955 ORTHO05D007633 4.9e-92 341.7 246 69.1
Nitab4.5_0000320g0120 Nicotiana tabacum HOM05D005955 ORTHO05D007633 6.4e-92 341.3 317 58.0
PSO339G4535 Papaver somniferum HOM05D005955 ORTHO05D007633 1.1e-91 340.5 241 70.5
Zm00001eb329830 Zea mays HOM05D005955 ORTHO05D007633 1.4e-91 340.1 244 66.8
Hund15721 Selenicereus undatus HOM05D005955 ORTHO05D007633 1.9e-91 339.7 301 59.8
Ah.10g030640 Amaranthus hybridus HOM05D000390 ORTHO05D000577 9.3e-91 337.4 240 72.1
PSO384G0859 Papaver somniferum HOM05D005955 ORTHO05D007633 9.3e-91 337.4 235 70.6
CSS0041352 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 1.6e-90 336.7 212 78.3
Sc10g0004360 Simmondsia chinensis HOM05D005955 ORTHO05D007633 2.1e-90 336.3 211 75.4
Lj3g0013196 Lotus japonicus HOM05D005955 ORTHO05D007633 3.9e-89 332.0 233 69.5
DCAR_031830 Daucus carota HOM05D005955 ORTHO05D007633 1.3e-87 327.0 208 75.0
Lj7A580T60 Lonicera japonica HOM05D005955 ORTHO05D007633 1.6e-87 326.6 213 75.1
MELO3C012462.2 Cucumis melo HOM05D005955 ORTHO05D007633 2.8e-87 325.9 217 74.7
CAN.G476.5 Capsicum annuum HOM05D005955 ORTHO05D007633 1.1e-86 323.9 208 75.5
Hma1.2p1_1251F.1_g270450 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 2.6e-85 319.3 199 78.4
Nn2g14899 Nelumbo nucifera HOM05D005955 ORTHO05D007633 1.3e-84 317.0 198 76.8
Oeu015683.2 Olea europaea HOM05D005955 ORTHO05D007633 1.7e-84 316.6 211 74.9
Os07g0659700 Oryza sativa ssp. japonica HOM05D005955 ORTHO05D007633 2.9e-76 289.3 201 70.1
arahy.Tifrunner.gnm1.ann1.NJCB22 Arachis hypogaea HOM05D005955 ORTHO05D007633 3.2e-75 285.8 335 50.1
SEGI_28535 Sequoiadendron giganteum HOM05D005955 ORTHO05D007633 6.1e-74 281.6 226 62.8
Atru.chr12.1174 Acer truncatum HOM05D005955 ORTHO05D007633 2.2e-71 273.1 174 77.6
Dinv09283 Davidia involucrata HOM05D005955 ORTHO05D007633 2.0e-69 266.5 165 79.4
AagrBONN_evm.TU.Sc2ySwM_344.4523 Anthoceros agrestis HOM05D005955 ORTHO05D007633 2.1e-66 256.5 229 54.6
SMO172G0212 Selaginella moellendorffii HOM05D005955 ORTHO05D007633 1.1e-64 250.8 235 53.6
Pp3c5_2560 Physcomitrium patens HOM05D005955 ORTHO05D007633 5.3e-62 241.9 228 54.8
CDE12G0962 Ceratophyllum demersum HOM05D005955 ORTHO05D007633 5.5e-59 231.9 150 74.0
Manes.08G167250 Manihot esculenta HOM05D005955 ORTHO05D007633 2.3e-57 226.5 136 81.6
CBR_g30624 Chara braunii HOM05D005955 ORTHO05D007633 4.5e-53 212.2 227 49.3
BolC8t50572H Brassica oleracea HOM05D005955 ORTHO05D007633 6.5e-52 208.4 146 70.5
BolC8t50570H Brassica oleracea HOM05D005955 ORTHO05D007633 3.2e-51 206.1 146 69.9
BraA09t40201Z Brassica rapa HOM05D005955 ORTHO05D007633 9.4e-51 204.5 146 68.5
AUR62037202 Chenopodium quinoa HOM05D005955 ORTHO05D007633 2.1e-50 203.4 137 72.3
Manes.11G001251 Manihot esculenta HOM05D005955 ORTHO05D007633 3.1e-46 189.5 117 79.5
Ciclev10002701m.g Citrus clementina HOM05D005955 ORTHO05D007633 2.2e-44 183.3 175 56.0
CARHR164380 Cardamine hirsuta HOM05D005955 ORTHO05D007633 1.5e-40 170.6 121 67.8
AUR62037203 Chenopodium quinoa HOM05D005955 ORTHO05D007633 7.5e-40 168.3 118 71.2
Psat7g193960 Pisum sativum HOM05D005955 ORTHO05D007633 1.5e-35 154.1 96 78.1
C08p29620 Brassica napus HOM05D005955 ORTHO05D007633 2.8e-34 149.8 79 86.1
CANSAT01G1797 Cannabis sativa HOM05D005955 ORTHO05D007633 4.9e-31 139.0 95 73.7
Nn8g40481 Nelumbo nucifera HOM05D005955 ORTHO05D007633 4.7e-26 122.5 102 60.8
Migut.N01795 Erythranthe guttata HOM05D005955 ORTHO05D007633 5.6e-19 99.0 116 50.9
TPR.G7208 Trifolium pratense HOM05D005955 ORTHO05D007633 1.4e-14 84.3 47 78.7
BcaC08g45413 Brassica carinata HOM05D005955 ORTHO05D007633 1.6e-13 80.9 114 43.9
PRCOL_00001745 Prasinoderma coloniale HOM05D005955 ORTHO05D007633 4.6e-13 79.3 171 28.7
BcaB05g22681 Brassica carinata HOM05D005955 ORTHO05D007633 1.3e-12 77.8 114 43.0


User provided reference genes

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