Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO367G0935 Selaginella moellendorffii HOM05D006419 ORTHO05D008096 1.3e-44 182.6 88 100.0
AagrBONN_evm.TU.Sc2ySwM_228.3881 Anthoceros agrestis HOM05D006419 ORTHO05D008096 8.4e-31 136.7 93 72.0
Mapoly0004s0131 Marchantia polymorpha HOM05D006419 ORTHO05D008096 7.9e-29 130.2 92 71.7
SEGI_03184 Sequoiadendron giganteum HOM05D006419 ORTHO05D008096 5.1e-28 127.5 92 66.3
Pp3c15_11080 Physcomitrium patens HOM05D006419 ORTHO05D008096 2.5e-27 125.2 92 66.3
ATR0757G048 Amborella trichopoda HOM05D006419 ORTHO05D008096 1.3e-26 122.9 92 59.8
Sabra14G0054000 Salix brachista HOM05D006419 ORTHO05D008096 1.6e-26 122.5 92 63.0
Hma1.2p1_0132F.1_g060780 Hydrangea macrophylla HOM05D006419 ORTHO05D008096 2.1e-26 122.1 92 63.0
PSO782G1455 Papaver somniferum HOM05D006419 ORTHO05D008096 2.1e-26 122.1 91 64.8
Migut.C01180 Erythranthe guttata HOM05D006419 ORTHO05D008096 2.8e-26 121.7 92 64.1
Nitab4.5_0001127g0020 Nicotiana tabacum HOM05D006419 ORTHO05D008096 2.8e-26 121.7 92 62.0
Nitab4.5_0013229g0010 Nicotiana tabacum HOM05D006419 ORTHO05D008096 3.7e-26 121.3 92 62.0
PSO478G5220 Papaver somniferum HOM05D006419 ORTHO05D008096 4.8e-26 120.9 91 63.7
Potri.014G078200 Populus trichocarpa HOM05D006419 ORTHO05D008096 4.8e-26 120.9 92 63.0
SGA_v2.0_scaffold486G52389 Striga asiatica HOM05D006419 ORTHO05D008096 4.8e-26 120.9 92 62.0
Oeu032965.1 Olea europaea HOM05D006419 ORTHO05D008096 6.2e-26 120.6 92 63.0
Oeu050256.1 Olea europaea HOM05D006419 ORTHO05D008096 6.2e-26 120.6 92 62.0
SGA_v2.0_scaffold24G10498 Striga asiatica HOM05D006419 ORTHO05D008096 6.2e-26 120.6 92 62.0
MSTRG.1480 Avicennia marina HOM05D006419 ORTHO05D008096 8.2e-26 120.2 93 61.3
AT3G61113 Arabidopsis thaliana HOM05D006419 ORTHO05D008096 1.1e-25 119.8 92 62.0
Dinv43747 Davidia involucrata HOM05D006419 ORTHO05D008096 1.1e-25 119.8 91 61.5
Solyc01g091890.3 Solanum lycopersicum HOM05D006419 ORTHO05D008096 1.1e-25 119.8 92 60.9
Sopen01g037660 Solanum pennellii HOM05D006419 ORTHO05D008096 1.1e-25 119.8 92 60.9
PGSC0003DMG400000132 Solanum tuberosum HOM05D006419 ORTHO05D008096 1.1e-25 119.8 92 60.9
Peaxi162Scf00021g00237 Petunia axillaris HOM05D006419 ORTHO05D008096 1.4e-25 119.4 92 60.9
Hund16966 Selenicereus undatus HOM05D006419 ORTHO05D008096 1.4e-25 119.4 92 59.8
THA.LOC104802008 Tarenaya hassleriana HOM05D006419 ORTHO05D008096 1.4e-25 119.4 92 62.0
Duzib138G0401 Durio zibethinus HOM05D006419 ORTHO05D008096 1.8e-25 119.0 92 62.0
HanXRQChr04g0126261 Helianthus annuus HOM05D006419 ORTHO05D008096 1.8e-25 119.0 92 60.9
MBI04_g28569_MAGBIO Magnolia biondii HOM05D006419 ORTHO05D008096 1.8e-25 119.0 92 59.8
Rhsim07G0022300 Rhododendron simsii HOM05D006419 ORTHO05D008096 1.8e-25 119.0 93 61.3
TAR636G0701 Trochodendron aralioides HOM05D006419 ORTHO05D008096 1.8e-25 119.0 92 63.0
vmacro20977 Vaccinium macrocarpon HOM05D006419 ORTHO05D008096 1.8e-25 119.0 92 60.9
MSTRG.25406 Avicennia marina HOM05D006419 ORTHO05D008096 2.4e-25 118.6 92 62.0
Cc02_g37090 Coffea canephora HOM05D006419 ORTHO05D008096 2.4e-25 118.6 92 62.0
Thhalv10001692m.g Eutrema salsugineum HOM05D006419 ORTHO05D008096 2.4e-25 118.6 92 60.9
Gohir.D11G088500 Gossypium hirsutum HOM05D006419 ORTHO05D008096 2.4e-25 118.6 92 60.9
Gorai.007G094600 Gossypium raimondii HOM05D006419 ORTHO05D008096 2.4e-25 118.6 92 60.9
Lsat_1_v5_gn_8_87621 Lactuca sativa HOM05D006419 ORTHO05D008096 2.4e-25 118.6 92 59.8
SalBow8G2260 Salvia bowleyana HOM05D006419 ORTHO05D008096 2.4e-25 118.6 92 62.0
Aqoxy7G00481 Aquilegia oxysepala HOM05D006419 ORTHO05D008096 3.1e-25 118.2 92 62.0
AT2G45695 Arabidopsis thaliana HOM05D006419 ORTHO05D008096 3.1e-25 118.2 94 61.7
BcaC01g05111 Brassica carinata HOM05D006419 ORTHO05D008096 3.1e-25 118.2 92 62.0
A03p25320 Brassica napus HOM05D006419 ORTHO05D008096 3.1e-25 118.2 92 62.0
C03p30210 Brassica napus HOM05D006419 ORTHO05D008096 3.1e-25 118.2 92 62.0
BolC3t15370H Brassica oleracea HOM05D006419 ORTHO05D008096 3.1e-25 118.2 92 62.0
BraA03t11736Z Brassica rapa HOM05D006419 ORTHO05D008096 3.1e-25 118.2 92 62.0
Cfa001844 Carpinus fangiana HOM05D006419 ORTHO05D008096 3.1e-25 118.2 92 60.9
Gohir.A11G084400 Gossypium hirsutum HOM05D006419 ORTHO05D008096 3.1e-25 118.2 92 60.9
Sp4g27740 Schrenkiella parvula HOM05D006419 ORTHO05D008096 3.1e-25 118.2 92 60.9
BcaB01g03257 Brassica carinata HOM05D006419 ORTHO05D008096 4.0e-25 117.9 92 60.9
Dinv32413 Davidia involucrata HOM05D006419 ORTHO05D008096 4.0e-25 117.9 92 62.0
TWI14G0146 Tripterygium wilfordii HOM05D006419 ORTHO05D008096 4.0e-25 117.9 92 63.0
GSVIVG01027592001 Vitis vinifera HOM05D006419 ORTHO05D008096 4.0e-25 117.9 92 60.9
FvH4_1g27190 Fragaria vesca HOM05D006419 ORTHO05D008096 5.3e-25 117.5 92 60.9
Nn6g34296 Nelumbo nucifera HOM05D006419 ORTHO05D008096 5.3e-25 117.5 91 61.5
QL08p050901 Quercus lobata HOM05D006419 ORTHO05D008096 5.3e-25 117.5 91 60.4
RcHm_v2.0_Chr3g0487581 Rosa chinensis HOM05D006419 ORTHO05D008096 5.3e-25 117.5 92 60.9
Thecc.01G370100 Theobroma cacao HOM05D006419 ORTHO05D008096 5.3e-25 117.5 92 60.9
AL5G43350 Arabidopsis lyrata HOM05D006419 ORTHO05D008096 6.9e-25 117.1 92 59.8
EL10Ac1g00975 Beta vulgaris HOM05D006419 ORTHO05D008096 6.9e-25 117.1 93 60.2
COL.COLO4_12638 Corchorus olitorius HOM05D006419 ORTHO05D008096 6.9e-25 117.1 92 60.9
Haze_16703 Corylus avellana HOM05D006419 ORTHO05D008096 6.9e-25 117.1 92 60.9
ECA236G2030 Erigeron canadensis HOM05D002941 ORTHO05D007802 6.9e-25 117.1 90 60.0
Actinidia09582 Actinidia chinensis HOM05D006419 ORTHO05D008096 9.0e-25 116.7 92 59.8
CARHR140920 Cardamine hirsuta HOM05D006419 ORTHO05D008096 9.0e-25 116.7 92 59.8
Duzib133G0791 Durio zibethinus HOM05D006419 ORTHO05D008096 1.2e-24 116.3 92 62.0
Sed0009830 Sechium edule HOM05D006419 ORTHO05D008096 1.2e-24 116.3 92 58.7
CAN.G170.61 Capsicum annuum HOM05D006419 ORTHO05D008096 1.5e-24 115.9 104 53.8
Eucgr.E01325 Eucalyptus grandis HOM05D006419 ORTHO05D008096 1.5e-24 115.9 92 58.7
Sc23g0003380 Simmondsia chinensis HOM05D006419 ORTHO05D008096 1.5e-24 115.9 92 57.6
Actinidia31456 Actinidia chinensis HOM05D006419 ORTHO05D008096 2.0e-24 115.5 92 58.7
MELO3C022522.2 Cucumis melo HOM05D006419 ORTHO05D008096 2.0e-24 115.5 92 59.8
Prupe.1G200200 Prunus persica HOM05D006419 ORTHO05D008096 2.0e-24 115.5 92 59.8
Carub.0004s2835 Capsella rubella HOM05D006419 ORTHO05D008096 2.6e-24 115.2 94 58.5
CsaV3_6G005910 Cucumis sativus L. HOM05D006419 ORTHO05D008096 2.6e-24 115.2 92 59.8
Phvul.010G089300 Phaseolus vulgaris HOM05D006419 ORTHO05D008096 2.6e-24 115.2 92 58.7
vmacro13347 Vaccinium macrocarpon HOM05D006419 ORTHO05D008096 2.6e-24 115.2 104 55.8
ClCG06G000160 Citrullus lanatus HOM05D006419 ORTHO05D008096 3.4e-24 114.8 92 59.8
Manes.01G263100 Manihot esculenta HOM05D006419 ORTHO05D008096 3.4e-24 114.8 92 58.7
PGR042G1692 Punica granatum HOM05D006419 ORTHO05D008096 3.4e-24 114.8 92 58.7
TWI59G0287 Tripterygium wilfordii HOM05D006419 ORTHO05D008096 3.4e-24 114.8 92 59.8
Atru.chr5.383 Acer truncatum HOM05D006419 ORTHO05D008096 4.5e-24 114.4 92 60.9
Lj1g0008204 Lotus japonicus HOM05D006419 ORTHO05D008096 4.5e-24 114.4 92 59.8
Aa31LG1G27170 Aethionema arabicum HOM05D006419 ORTHO05D008096 5.8e-24 114.0 92 58.7
CANSAT56G1223 Cannabis sativa HOM05D006419 ORTHO05D008096 5.8e-24 114.0 92 58.7
arahy.Tifrunner.gnm1.ann1.V3JJAU Arachis hypogaea HOM05D006419 ORTHO05D008096 7.6e-24 113.6 92 58.7
CiPaw.01G257500 Carya illinoinensis HOM05D006419 ORTHO05D008096 7.6e-24 113.6 92 59.8
unitig_37.g12884 Utricularia gibba HOM05D006419 ORTHO05D008096 7.6e-24 113.6 91 63.7
Ciclev10023026m.g Citrus clementina HOM05D006419 ORTHO05D008096 1.0e-23 113.2 92 59.8
Lalb_Chr10g0097581 Lupinus albus HOM05D006419 ORTHO05D008096 1.0e-23 113.2 92 58.7
Lalb_Chr17g0340031 Lupinus albus HOM05D006419 ORTHO05D008096 1.0e-23 113.2 92 58.7
TAR375G0946 Trochodendron aralioides HOM05D006419 ORTHO05D008096 1.3e-23 112.8 91 59.3
CDE11G0029 Ceratophyllum demersum HOM05D006419 ORTHO05D008096 1.7e-23 112.5 92 58.7
HPP92_022119 Vanilla planifolia HOM05D006419 ORTHO05D008096 1.7e-23 112.5 91 59.3
Medtr8g032860 Medicago truncatula HOM05D006419 ORTHO05D008096 2.2e-23 112.1 94 57.4
TPR.G17971 Trifolium pratense HOM05D006419 ORTHO05D008096 2.2e-23 112.1 94 57.4
VMungo0331G1339 Vigna mungo HOM05D006419 ORTHO05D008096 2.9e-23 111.7 92 57.6
Cre10.g426000 Chlamydomonas reinhardtii HOM05D006419 ORTHO05D008096 3.8e-23 111.3 92 57.6
Glyma.07G080100 Glycine max HOM05D006419 ORTHO05D008096 3.8e-23 111.3 92 57.6
Psat4g151440 Pisum sativum HOM05D006419 ORTHO05D008096 3.8e-23 111.3 94 56.4
Ca_23766_v3 Cicer arietinum L. HOM05D006419 ORTHO05D008096 4.9e-23 110.9 92 57.6
MD04G1046600 Malus domestica HOM05D006419 ORTHO05D008096 1.9e-22 109.0 92 58.7
Glyma.03G018600 Glycine max HOM05D006419 ORTHO05D008096 5.5e-22 107.5 92 57.6
FAN19G0283 Fragaria x ananassa HOM05D006419 ORTHO05D008096 6.7e-20 100.5 67 67.2
Hund09553 Selenicereus undatus HOM05D006419 ORTHO05D008096 2.5e-19 98.6 83 54.2
FAN28G0164 Fragaria x ananassa HOM05D006419 ORTHO05D008096 3.3e-19 98.2 65 67.7
Carub.0005s2776 Capsella rubella HOM05D006419 ORTHO05D008096 9.7e-19 96.7 67 64.2
PSO782G2080 Papaver somniferum HOM05D006419 ORTHO05D008096 1.3e-18 96.3 65 69.2
BcaB06g29431 Brassica carinata HOM05D006419 ORTHO05D008096 1.6e-18 95.9 79 58.2
FAN23G1662 Fragaria x ananassa HOM05D006419 ORTHO05D008096 1.6e-18 95.9 65 66.2
PRCOL_00003278 Prasinoderma coloniale HOM05D006419 ORTHO05D008096 2.8e-18 95.1 93 53.8
arahy.Tifrunner.gnm1.ann1.PAP2UH Arachis hypogaea HOM05D006419 ORTHO05D008096 4.8e-18 94.4 83 53.0
Haze_27740 Corylus avellana HOM05D006419 ORTHO05D008096 1.0e-15 86.7 93 44.1
FAN28G1401 Fragaria x ananassa HOM05D006419 ORTHO05D008096 5.5e-14 80.9 74 54.1
Ah.15g094110 Amaranthus hybridus HOM05D006419 ORTHO05D008096 7.2e-14 80.5 92 47.8
AL4G44870 Arabidopsis lyrata HOM05D006419 ORTHO05D008096 8.8e-12 73.6 65 55.4
A04p33960 Brassica napus HOM05D006419 ORTHO05D008096 5.7e-11 70.9 61 55.7
SHI13486 Sapria himalayana HOM05D006419 ORTHO05D008096 6.5e-07 57.4 41 58.5
CSS0035991 Camellia sinensis var. sinensis HOM05D006419 ORTHO05D008096 1.4e-06 56.2 53 52.8


User provided reference genes

Program Settings