Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO367G0555 Selaginella moellendorffii HOM05D004694 ORTHO05D006576 0.0e+00 1137.9 557 100.0
Pp3c20_22510 Physcomitrium patens HOM05D004694 ORTHO05D006576 4.8e-257 891.0 545 78.0
SEGI_27575 Sequoiadendron giganteum HOM05D004694 ORTHO05D006576 6.5e-254 880.6 557 74.3
Mapoly0154s0035 Marchantia polymorpha HOM05D004694 ORTHO05D006576 4.8e-249 864.4 537 77.3
AagrBONN_evm.TU.Sc2ySwM_117.2387 Anthoceros agrestis HOM05D004694 ORTHO05D006576 3.5e-239 831.6 533 74.3
Atru.chr9.1027_Atru.chr9.1028 Acer truncatum HOM05D004694 ORTHO05D006576 1.3e-233 813.1 556 70.3
Solyc03g111140.3 Solanum lycopersicum HOM05D004694 ORTHO05D006576 1.3e-233 813.1 556 71.0
Nitab4.5_0001664g0050 Nicotiana tabacum HOM05D004694 ORTHO05D006576 6.3e-233 810.8 556 71.0
MELO3C002350.2 Cucumis melo HOM05D004694 ORTHO05D006576 1.1e-232 810.1 562 70.6
ClCG03G003600 Citrullus lanatus HOM05D004694 ORTHO05D006576 1.4e-232 809.7 561 70.6
Sopen03g030290 Solanum pennellii HOM05D004694 ORTHO05D006576 1.4e-232 809.7 556 70.7
AagrBONN_evm.TU.Sc2ySwM_228.3843 Anthoceros agrestis HOM05D004694 ORTHO05D006576 2.4e-232 808.9 536 72.0
CsaV3_1G009520 Cucumis sativus L. HOM05D004694 ORTHO05D006576 4.1e-232 808.1 562 70.5
Eucgr.K02748 Eucalyptus grandis HOM05D004694 ORTHO05D006576 9.2e-232 807.0 549 71.6
PGSC0003DMG400015192 Solanum tuberosum HOM05D004694 ORTHO05D006576 9.2e-232 807.0 556 70.5
THA.LOC104825008 Tarenaya hassleriana HOM05D004694 ORTHO05D006576 1.2e-231 806.6 545 71.4
TAR622G1078 Trochodendron aralioides HOM05D004694 ORTHO05D006576 1.2e-231 806.6 564 70.0
CBR_g26132 Chara braunii HOM05D004694 ORTHO05D006576 2.0e-231 805.8 536 70.1
Solyc03g111130.1 Solanum lycopersicum HOM05D004694 ORTHO05D006576 2.0e-231 805.8 549 71.2
Sopen03g030280 Solanum pennellii HOM05D004694 ORTHO05D006576 2.0e-231 805.8 549 71.4
Thecc.03G124900 Theobroma cacao HOM05D004694 ORTHO05D006576 2.7e-231 805.4 549 70.7
CAN.G352.42 Capsicum annuum HOM05D004694 ORTHO05D006576 3.5e-231 805.1 556 70.7
Nitab4.5_0003680g0030 Nicotiana tabacum HOM05D004694 ORTHO05D006576 4.6e-231 804.7 556 70.5
Ciclev10019499m.g Citrus clementina HOM05D004694 ORTHO05D006576 5.9e-231 804.3 549 71.2
Lj4g0028142 Lotus japonicus HOM05D004694 ORTHO05D006576 7.8e-231 803.9 549 71.2
Medtr8g028225 Medicago truncatula HOM05D004694 ORTHO05D006576 1.0e-230 803.5 549 70.7
MD06G1147700 Malus domestica HOM05D004694 ORTHO05D006576 2.3e-230 802.4 551 71.0
TPR.G21293 Trifolium pratense HOM05D004694 ORTHO05D006576 3.9e-230 801.6 549 70.3
arahy.Tifrunner.gnm1.ann1.C9ULKZ Arachis hypogaea HOM05D004694 ORTHO05D006576 5.0e-230 801.2 549 71.0
arahy.Tifrunner.gnm1.ann1.EW3HTN Arachis hypogaea HOM05D004694 ORTHO05D006576 5.0e-230 801.2 549 71.2
unitig_21.g20324 Utricularia gibba HOM05D004694 ORTHO05D006576 5.0e-230 801.2 545 71.4
FAN08G1582 Fragaria x ananassa HOM05D004694 ORTHO05D006576 6.6e-230 800.8 559 69.6
Peaxi162Scf00089g00419 Petunia axillaris HOM05D004694 ORTHO05D006576 6.6e-230 800.8 549 70.5
arahy.Tifrunner.gnm1.ann1.18QE6Y Arachis hypogaea HOM05D004694 ORTHO05D006576 8.6e-230 800.4 549 71.0
FvH4_5g07710 Fragaria vesca HOM05D004694 ORTHO05D006576 1.1e-229 800.0 550 70.5
FAN04G1296 Fragaria x ananassa HOM05D004694 ORTHO05D006576 1.5e-229 799.7 559 69.6
arahy.Tifrunner.gnm1.ann1.HVKI9W Arachis hypogaea HOM05D004694 ORTHO05D006576 2.5e-229 798.9 549 71.0
Prupe.5G154600 Prunus persica HOM05D004694 ORTHO05D006576 2.5e-229 798.9 551 70.6
arahy.Tifrunner.gnm1.ann1.J1V7G3 Arachis hypogaea HOM05D004694 ORTHO05D006576 4.3e-229 798.1 549 70.5
HanXRQChr05g0154041 Helianthus annuus HOM05D004694 ORTHO05D006576 5.6e-229 797.7 549 70.3
Rhsim12G0172800 Rhododendron simsii HOM05D004694 ORTHO05D006576 7.3e-229 797.3 564 68.4
RcHm_v2.0_Chr7g0190721 Rosa chinensis HOM05D004694 ORTHO05D006576 7.3e-229 797.3 551 70.6
PSO478G2802 Papaver somniferum HOM05D004694 ORTHO05D006576 9.5e-229 797.0 548 69.2
CSS0001791 Camellia sinensis var. sinensis HOM05D004694 ORTHO05D006576 1.6e-228 796.2 562 68.9
FAN18G1141 Fragaria x ananassa HOM05D004694 ORTHO05D006576 2.1e-228 795.8 550 70.2
AT5G03860 Arabidopsis thaliana HOM05D004694 ORTHO05D006576 2.8e-228 795.4 549 69.8
Sed0009275 Sechium edule HOM05D004694 ORTHO05D006576 4.7e-228 794.7 542 70.7
Cfa018868 Carpinus fangiana HOM05D004694 ORTHO05D006576 6.1e-228 794.3 549 70.5
CiPaw.11G010700 Carya illinoinensis HOM05D004694 ORTHO05D006576 6.1e-228 794.3 542 70.8
PGR044G1202 Punica granatum HOM05D004694 ORTHO05D006576 6.1e-228 794.3 542 70.8
DCAR_016413 Daucus carota HOM05D004694 ORTHO05D006576 1.8e-227 792.7 549 69.4
Potri.015G092000 Populus trichocarpa HOM05D004694 ORTHO05D006576 5.2e-227 791.2 552 69.9
PSO017G1181 Papaver somniferum HOM05D004694 ORTHO05D006576 6.8e-227 790.8 548 68.6
Duzib205G1411 Durio zibethinus HOM05D004694 ORTHO05D006576 8.9e-227 790.4 542 70.3
Lsat_1_v5_gn_5_13501 Lactuca sativa HOM05D004694 ORTHO05D006576 8.9e-227 790.4 549 69.8
AL6G13430 Arabidopsis lyrata HOM05D004694 ORTHO05D006576 1.2e-226 790.0 549 69.0
Aa31LG1G21410 Aethionema arabicum HOM05D004694 ORTHO05D006576 1.5e-226 789.6 549 69.6
Migut.I00493 Erythranthe guttata HOM05D004694 ORTHO05D006576 2.6e-226 788.9 549 69.2
Aqoxy3G01456 Aquilegia oxysepala HOM05D004694 ORTHO05D006576 3.4e-226 788.5 549 69.2
BraA02t04789Z Brassica rapa HOM05D004694 ORTHO05D006576 4.4e-226 788.1 548 69.3
TWI39G0550 Tripterygium wilfordii HOM05D004694 ORTHO05D006576 4.4e-226 788.1 542 70.5
Hma1.2p1_0014F.1_g009775 Hydrangea macrophylla HOM05D004694 ORTHO05D006576 5.8e-226 787.7 557 68.6
C02p01580 Brassica napus HOM05D004694 ORTHO05D006576 7.5e-226 787.3 548 69.5
Dinv04852 Davidia involucrata HOM05D004694 ORTHO05D006576 9.8e-226 786.9 543 69.8
BolC2t06123H Brassica oleracea HOM05D004694 ORTHO05D006576 3.7e-225 785.0 548 69.0
Carub.0006s0280 Capsella rubella HOM05D004694 ORTHO05D006576 8.3e-225 783.9 549 69.2
ECA246G0215 Erigeron canadensis HOM05D004694 ORTHO05D006576 8.3e-225 783.9 549 69.0
Thhalv10015335m.g Eutrema salsugineum HOM05D004694 ORTHO05D006576 1.1e-224 783.5 549 68.7
SGA_v2.0_scaffold80G25701 Striga asiatica HOM05D004694 ORTHO05D006576 1.1e-224 783.5 543 69.8
Lalb_Chr07g0183271 Lupinus albus HOM05D004694 ORTHO05D006576 1.4e-224 783.1 553 68.7
Sp6g38870 Schrenkiella parvula HOM05D004694 ORTHO05D006576 1.9e-224 782.7 549 68.7
Gorai.001G060900 Gossypium raimondii HOM05D004694 ORTHO05D006576 2.4e-224 782.3 545 69.7
Glyma.17G128000 Glycine max HOM05D004694 ORTHO05D006576 3.2e-224 781.9 549 68.7
Gohir.D07G057400 Gossypium hirsutum HOM05D004694 ORTHO05D006576 1.6e-223 779.6 545 69.7
Gohir.A07G053000 Gossypium hirsutum HOM05D004694 ORTHO05D006576 2.0e-223 779.2 545 69.4
Oeu044618.1 Olea europaea HOM05D004694 ORTHO05D006576 2.7e-223 778.9 526 71.3
CARHR209400 Cardamine hirsuta HOM05D004694 ORTHO05D006576 3.5e-223 778.5 549 68.5
VMungo1215G0651 Vigna mungo HOM05D004694 ORTHO05D006576 3.5e-223 778.5 557 67.0
CANSAT11G0344 Cannabis sativa HOM05D004694 ORTHO05D006576 6.0e-223 777.7 550 68.5
vmacro16662 Vaccinium macrocarpon HOM05D004694 ORTHO05D006576 6.0e-223 777.7 588 65.3
HPP92_023361 Vanilla planifolia HOM05D004694 ORTHO05D006576 7.8e-223 777.3 549 69.0
Nn4g22401 Nelumbo nucifera HOM05D004694 ORTHO05D006576 2.3e-222 775.8 550 69.1
Sabra15G0113800 Salix brachista HOM05D004694 ORTHO05D006576 1.1e-221 773.5 538 69.7
Sc14g0007560 Simmondsia chinensis HOM05D004694 ORTHO05D006576 1.9e-221 772.7 555 67.4
ATR0824G173 Amborella trichopoda HOM05D004694 ORTHO05D006576 2.5e-221 772.3 545 68.4
CDE09G0730 Ceratophyllum demersum HOM05D004694 ORTHO05D006576 2.5e-221 772.3 549 68.7
EL10As4g23460 Beta vulgaris HOM05D004694 ORTHO05D006576 5.6e-221 771.2 549 68.1
SalBow5G3571 Salvia bowleyana HOM05D004694 ORTHO05D006576 7.3e-221 770.8 549 68.5
Lj5C97G9 Lonicera japonica HOM05D004694 ORTHO05D006576 9.5e-221 770.4 579 64.9
Glyma.05G045900 Glycine max HOM05D004694 ORTHO05D006576 4.7e-220 768.1 542 68.5
AUR62029660 Chenopodium quinoa HOM05D004694 ORTHO05D006576 1.4e-219 766.5 538 67.1
Glyma.17G128100 Glycine max HOM05D004694 ORTHO05D006576 1.4e-219 766.5 538 68.6
Sopen03g030270 Solanum pennellii HOM05D004694 ORTHO05D006576 1.4e-219 766.5 556 66.9
AUR62025866 Chenopodium quinoa HOM05D004694 ORTHO05D006576 1.8e-219 766.1 538 67.3
PGSC0003DMG400015194 Solanum tuberosum HOM05D004694 ORTHO05D006576 6.8e-219 764.2 556 66.9
BcaB05g21798 Brassica carinata HOM05D004694 ORTHO05D006576 8.9e-219 763.8 556 67.1
Phvul.003G209200 Phaseolus vulgaris HOM05D004694 ORTHO05D006576 8.9e-219 763.8 538 68.6
VMungo1215G1303 Vigna mungo HOM05D004694 ORTHO05D006576 8.9e-219 763.8 542 68.1
arahy.Tifrunner.gnm1.ann1.U91AM5 Arachis hypogaea HOM05D004694 ORTHO05D006576 2.6e-218 762.3 552 68.5
CAN.G352.43 Capsicum annuum HOM05D004694 ORTHO05D006576 4.1e-216 755.0 558 66.1
QL10p004544 Quercus lobata HOM05D004694 ORTHO05D006576 7.8e-215 750.7 499 72.7
Zm00001eb079170 Zea mays HOM05D004694 ORTHO05D006576 1.5e-213 746.5 543 67.4
MSTRG.9318 Avicennia marina HOM05D004694 ORTHO05D006576 9.5e-213 743.8 494 72.5
Os04g0486950 Oryza sativa ssp. japonica HOM05D004694 ORTHO05D006576 6.2e-212 741.1 547 66.5
Cpa.g.sc4.107 Carica papaya HOM05D004694 ORTHO05D006576 3.1e-211 738.8 549 67.0
Ah.11g044960 Amaranthus hybridus HOM05D004694 ORTHO05D006576 5.2e-211 738.0 542 64.6
SalBow1G3673 Salvia bowleyana HOM05D004694 ORTHO05D006576 2.7e-207 725.7 538 65.2
SalBow1G5430 Salvia bowleyana HOM05D004694 ORTHO05D006576 4.6e-207 724.9 538 65.1
Ca_23552_v3 Cicer arietinum L. HOM05D004694 ORTHO05D006576 8.6e-206 720.7 549 65.6
FAN13G0009 Fragaria x ananassa HOM05D004694 ORTHO05D006576 2.5e-205 719.2 554 64.6
Actinidia08860 Actinidia chinensis HOM05D004694 ORTHO05D006576 3.4e-202 708.8 564 62.9
Haze_07250 Corylus avellana HOM05D004694 ORTHO05D006576 3.9e-198 695.3 549 64.8
CDE08G1017 Ceratophyllum demersum HOM05D004694 ORTHO05D006576 1.3e-196 690.3 494 67.8
MBI11_g05409_MAGBIO Magnolia biondii HOM05D004694 ORTHO05D006576 2.8e-196 689.1 559 64.6
Cc04_g10080 Coffea canephora HOM05D004694 ORTHO05D006576 1.4e-195 686.8 549 62.8
Dinv11097 Davidia involucrata HOM05D004694 ORTHO05D006576 2.1e-188 662.9 455 70.8
GSVIVG01008494001 Vitis vinifera HOM05D004694 ORTHO05D006576 3.1e-187 659.1 541 61.2
COL.COLO4_28061 Corchorus olitorius HOM05D004694 ORTHO05D006576 1.9e-181 639.8 548 60.2
Manes.14G054100 Manihot esculenta HOM05D004694 ORTHO05D006576 3.7e-180 635.6 424 72.9
QL10p004639 Quercus lobata HOM05D004694 ORTHO05D006576 4.2e-176 622.1 413 73.6
SalBow1G1465 Salvia bowleyana HOM05D004694 ORTHO05D006576 1.5e-165 587.0 535 56.8
SalBow1G5822 Salvia bowleyana HOM05D004694 ORTHO05D006576 1.5e-165 587.0 535 56.8
Cre03.g144807 Chlamydomonas reinhardtii HOM05D004694 ORTHO05D006576 1.4e-152 543.9 545 51.9
TAR374G0737 Trochodendron aralioides HOM05D004694 ORTHO05D002940 4.2e-152 542.3 605 50.7
Psat4g158240 Pisum sativum HOM05D004694 ORTHO05D006576 5.0e-137 492.3 330 73.3
Phvul.003G209101 Phaseolus vulgaris HOM05D004694 ORTHO05D006576 2.5e-136 490.0 334 70.7
HPP92_023371 Vanilla planifolia HOM05D004694 ORTHO05D006576 7.5e-125 451.8 309 71.8
Actinidia36796 Actinidia chinensis HOM05D004694 ORTHO05D006576 5.4e-123 445.7 545 47.3
arahy.Tifrunner.gnm1.ann1.SX4PQT Arachis hypogaea HOM05D004694 ORTHO05D006576 4.3e-120 436.0 292 74.0
Hund10205 Selenicereus undatus HOM05D004694 ORTHO05D006576 5.6e-96 355.9 331 55.3
Ca_23555_v3 Cicer arietinum L. HOM05D004694 ORTHO05D006576 4.7e-95 352.8 258 64.0
Potri.012G094532 Populus trichocarpa HOM05D004694 ORTHO05D006576 8.9e-86 322.0 199 74.9
AagrBONN_evm.TU.Sc2ySwM_344.4962 Anthoceros agrestis HOM05D004694 ORTHO05D006576 3.2e-75 287.0 335 47.5
SalBow1G0618 Salvia bowleyana HOM05D004694 ORTHO05D006576 2.0e-69 267.7 503 37.6
Duzib068G0556 Durio zibethinus HOM05D004694 ORTHO05D006576 8.7e-49 199.1 139 71.2
BcaB01g05780 Brassica carinata HOM05D004694 ORTHO05D006576 1.3e-47 195.3 194 48.5
PGSC0003DMG402015193 Solanum tuberosum HOM05D004694 ORTHO05D016782 1.3e-47 195.3 133 72.2
BcaC08g44622 Brassica carinata HOM05D004694 ORTHO05D016782 2.2e-39 167.9 124 65.3
BraA09t39454Z Brassica rapa HOM05D002984 ORTHO05D003561 1.8e-38 164.9 132 61.4
SalBow1G0228 Salvia bowleyana HOM05D004694 ORTHO05D006576 1.2e-37 162.2 119 64.7
VMungo1383G1618 Vigna mungo HOM05D004694 ORTHO05D046692 3.8e-36 157.1 109 64.2
A03p11210 Brassica napus HOM05D004694 ORTHO05D016782 6.5e-36 156.4 120 63.3
C06p36560 Brassica napus HOM05D004694 ORTHO05D016782 6.5e-36 156.4 120 63.3
C06p20980 Brassica napus HOM05D004694 ORTHO05D016782 6.1e-34 149.8 115 61.7
BolC6t37284H Brassica oleracea HOM05D004694 ORTHO05D016782 6.1e-34 149.8 115 61.7
arahy.Tifrunner.gnm1.ann1.0V01Q6 Arachis hypogaea HOM05D004694 ORTHO05D006576 7.4e-32 142.9 111 59.5
A09p39550 Brassica napus HOM05D004694 ORTHO05D016782 9.7e-32 142.5 114 60.5
BraA01t01659Z Brassica rapa HOM05D004694 ORTHO05D016782 9.7e-32 142.5 114 60.5
PGSC0003DMG401015193 Solanum tuberosum HOM05D004694 ORTHO05D006576 4.8e-31 140.2 76 77.6
Ca_29801_v3 Cicer arietinum L. HOM05D004694 ORTHO05D006576 1.8e-30 138.3 111 57.7
Glyma.05G045851 Glycine max HOM05D004694 ORTHO05D046692 2.6e-29 134.4 95 65.3
Ca_28596_v3 Cicer arietinum L. HOM05D004694 ORTHO05D148954 1.0e-25 122.5 118 51.7
Ca_03499_v3 Cicer arietinum L. HOM05D004694 ORTHO05D016782 3.5e-21 107.5 79 65.8
SalBow1G3079 Salvia bowleyana HOM05D004694 ORTHO05D006576 1.5e-19 102.1 72 61.1
AUR62040389 Chenopodium quinoa HOM05D003382 ORTHO05D003930 4.7e-18 97.1 72 63.9
MD14G1161700 Malus domestica HOM05D004694 ORTHO05D248771 1.5e-16 92.0 187 35.8
Glyma.19G088650 Glycine max HOM05D004694 ORTHO05D213888 3.1e-14 84.3 57 64.9
MD14G1161800 Malus domestica HOM05D004694 ORTHO05D016782 6.8e-09 66.6 52 61.5


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