Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO367G0452 Selaginella moellendorffii HOM05D007405 ORTHO05D009256 2.3e-54 217.6 547 100.0
Mapoly0061s0076 Marchantia polymorpha HOM05D007405 ORTHO05D009256 3.3e-16 90.9 52 75.0
SEGI_22031 Sequoiadendron giganteum HOM05D007405 ORTHO05D009256 5.6e-16 90.1 53 71.7
AagrBONN_evm.TU.Sc2ySwM_117.2241 Anthoceros agrestis HOM05D007405 ORTHO05D009256 6.2e-15 86.7 54 68.5
Pp3c3_5760 Physcomitrium patens HOM05D007405 ORTHO05D009256 1.1e-14 85.9 54 68.5
Pp3c3_5764 Physcomitrium patens HOM05D007405 ORTHO05D009256 1.1e-14 85.9 54 68.5
Nn1g09226 Nelumbo nucifera HOM05D007405 ORTHO05D009256 2.4e-14 84.7 55 67.3
PSO832G3067 Papaver somniferum HOM05D007405 ORTHO05D009256 2.4e-14 84.7 57 64.9
QL02p079911 Quercus lobata HOM05D007405 ORTHO05D009256 2.4e-14 84.7 59 61.0
Cfa007501 Carpinus fangiana HOM05D007405 ORTHO05D009256 4.0e-14 84.0 59 59.3
CDE06G2170 Ceratophyllum demersum HOM05D007405 ORTHO05D009256 4.0e-14 84.0 58 65.5
Haze_14594 Corylus avellana HOM05D007405 ORTHO05D009256 4.0e-14 84.0 59 59.3
Lj6g0001930 Lotus japonicus HOM05D007405 ORTHO05D009256 5.3e-14 83.6 59 62.7
PSO591G0419 Papaver somniferum HOM05D007405 ORTHO05D009256 5.3e-14 83.6 53 67.9
VMungo1383G1541 Vigna mungo HOM05D007405 ORTHO05D009256 9.0e-14 82.8 59 64.4
GSVIVG01032591001 Vitis vinifera HOM05D007405 ORTHO05D009256 9.0e-14 82.8 57 63.2
Migut.H00884 Erythranthe guttata HOM05D007405 ORTHO05D009256 1.2e-13 82.4 57 64.9
MD09G1044200 Malus domestica HOM05D007405 ORTHO05D009256 1.2e-13 82.4 59 59.3
Prupe.3G273600 Prunus persica HOM05D007405 ORTHO05D009256 1.2e-13 82.4 59 59.3
MSTRG.19401 Avicennia marina HOM05D007405 ORTHO05D009256 1.5e-13 82.0 59 62.7
Cc07_g02870 Coffea canephora HOM05D007405 ORTHO05D009256 1.5e-13 82.0 59 62.7
COL.COLO4_25223 Corchorus olitorius HOM05D000330 ORTHO05D000209 1.5e-13 82.0 59 59.3
HanXRQChr14g0449381 Helianthus annuus HOM05D007405 ORTHO05D009256 1.5e-13 82.0 59 62.7
Manes.17G025500 Manihot esculenta HOM05D007405 ORTHO05D009256 1.5e-13 82.0 59 61.0
CSS0008879 Camellia sinensis var. sinensis HOM05D007405 ORTHO05D009256 2.0e-13 81.6 59 61.0
CSS0011088 Camellia sinensis var. sinensis HOM05D007405 ORTHO05D009256 2.0e-13 81.6 59 61.0
CiPaw.04G020600 Carya illinoinensis HOM05D007405 ORTHO05D009256 2.0e-13 81.6 59 59.3
Glyma.18G000700 Glycine max HOM05D007405 ORTHO05D009256 2.6e-13 81.3 59 61.0
PGR031G2628 Punica granatum HOM05D007405 ORTHO05D009256 2.6e-13 81.3 57 61.4
TAR039G0001 Trochodendron aralioides HOM05D002295 ORTHO05D002789 2.6e-13 81.3 55 67.3
CANSAT64G0564 Cannabis sativa HOM05D007405 ORTHO05D009256 3.4e-13 80.9 59 59.3
Cpa.g.sc14.54 Carica papaya HOM05D007405 ORTHO05D009256 3.4e-13 80.9 57 63.2
Ca_16386_v3 Cicer arietinum L. HOM05D007405 ORTHO05D009256 3.4e-13 80.9 59 62.7
Ca_29700_v3 Cicer arietinum L. HOM05D007405 ORTHO05D009256 3.4e-13 80.9 59 62.7
ClCG10G014780 Citrullus lanatus HOM05D007405 ORTHO05D009256 3.4e-13 80.9 59 61.0
DCAR_011169 Daucus carota HOM05D007405 ORTHO05D009256 3.4e-13 80.9 59 62.7
Dinv33696 Davidia involucrata HOM05D007405 ORTHO05D009256 3.4e-13 80.9 58 62.1
Medtr3g083680 Medicago truncatula HOM05D007405 ORTHO05D009256 3.4e-13 80.9 59 61.0
Psat5g105040 Pisum sativum HOM05D007405 ORTHO05D009256 3.4e-13 80.9 59 61.0
Glyma.11G256300 Glycine max HOM05D007405 ORTHO05D009256 4.5e-13 80.5 59 61.0
Oeu027767.1 Olea europaea HOM05D007405 ORTHO05D009256 4.5e-13 80.5 59 62.7
Atru.chr8.2441 Acer truncatum HOM05D007405 ORTHO05D009256 5.8e-13 80.1 59 59.3
ATR1127G129 Amborella trichopoda HOM05D007405 ORTHO05D009256 5.8e-13 80.1 57 59.6
AT5G39980 Arabidopsis thaliana HOM05D007405 ORTHO05D009256 5.8e-13 80.1 59 59.3
Lalb_Chr23g0278451 Lupinus albus HOM05D007405 ORTHO05D009256 5.8e-13 80.1 59 59.3
Sc11g0006880 Simmondsia chinensis HOM05D007405 ORTHO05D009256 5.8e-13 80.1 56 64.3
A07p20170 Brassica napus HOM05D007405 ORTHO05D009256 7.6e-13 79.7 59 59.3
BraA07t29716Z Brassica rapa HOM05D007405 ORTHO05D009256 7.6e-13 79.7 59 59.3
MELO3C009896.2 Cucumis melo HOM05D007405 ORTHO05D009256 7.6e-13 79.7 59 59.3
CsaV3_3G041760 Cucumis sativus L. HOM05D007405 ORTHO05D009256 7.6e-13 79.7 59 59.3
Sed0003758 Sechium edule HOM05D007405 ORTHO05D009256 7.6e-13 79.7 59 59.3
CARHR262150 Cardamine hirsuta HOM05D007405 ORTHO05D009256 9.9e-13 79.3 59 59.3
Thhalv10028245m.g Eutrema salsugineum HOM05D007405 ORTHO05D009256 9.9e-13 79.3 59 59.3
Sp7g02090 Schrenkiella parvula HOM05D007405 ORTHO05D009256 9.9e-13 79.3 59 59.3
Solyc02g087560.1 Solanum lycopersicum HOM05D007405 ORTHO05D009256 9.9e-13 79.3 59 61.0
Sopen02g032330 Solanum pennellii HOM05D007405 ORTHO05D009256 9.9e-13 79.3 59 61.0
PGSC0003DMG400001306 Solanum tuberosum HOM05D007405 ORTHO05D009256 9.9e-13 79.3 59 61.0
BcaC08g44440 Brassica carinata HOM05D007405 ORTHO05D009256 1.3e-12 79.0 59 57.6
C06p18840 Brassica napus HOM05D007405 ORTHO05D009256 1.3e-12 79.0 59 57.6
BolC6t37089H Brassica oleracea HOM05D007405 ORTHO05D009256 1.3e-12 79.0 59 57.6
AL7G50110 Arabidopsis lyrata HOM05D007405 ORTHO05D009256 1.7e-12 78.6 59 59.3
AUR62018305 Chenopodium quinoa HOM05D007405 ORTHO05D009256 1.7e-12 78.6 59 55.9
AUR62030576 Chenopodium quinoa HOM05D007405 ORTHO05D009256 1.7e-12 78.6 59 55.9
Nitab4.5_0002265g0130 Nicotiana tabacum HOM05D007405 ORTHO05D009256 1.7e-12 78.6 59 61.0
Potri.017G075700 Populus trichocarpa HOM05D007405 ORTHO05D009256 1.7e-12 78.6 59 59.3
Sabra17G0067600 Salix brachista HOM05D007405 ORTHO05D009256 1.7e-12 78.6 59 59.3
Carub.0007s3571 Capsella rubella HOM05D007405 ORTHO05D009256 2.2e-12 78.2 58 58.6
Ciclev10011224m.g Citrus clementina HOM05D007405 ORTHO05D009256 2.2e-12 78.2 59 55.9
Peaxi162Scf00129g00512 Petunia axillaris HOM05D007405 ORTHO05D009256 2.2e-12 78.2 59 59.3
SGA_v2.0_scaffold115G32153 Striga asiatica HOM05D007405 ORTHO05D009256 2.2e-12 78.2 59 57.6
CAN.G206.101 Capsicum annuum HOM05D007405 ORTHO05D009256 2.9e-12 77.8 59 61.0
Aa31LG9G1630 Aethionema arabicum HOM05D000330 ORTHO05D009256 3.8e-12 77.4 57 59.6
BcaB02g07958 Brassica carinata HOM05D007405 ORTHO05D009256 4.9e-12 77.0 59 55.9
Actinidia36037 Actinidia chinensis HOM05D007405 ORTHO05D009256 6.4e-12 76.6 59 52.5
Duzib147G0736 Durio zibethinus HOM05D007405 ORTHO05D009256 6.4e-12 76.6 57 57.9
TWI56G0828 Tripterygium wilfordii HOM05D007405 ORTHO05D009256 6.4e-12 76.6 59 57.6
Ah.10g031180 Amaranthus hybridus HOM05D007405 ORTHO05D009256 8.4e-12 76.3 59 55.9
FvH4_6g49520 Fragaria vesca HOM05D007405 ORTHO05D009256 8.4e-12 76.3 59 57.6
FAN05G4748 Fragaria x ananassa HOM05D007405 ORTHO05D009256 8.4e-12 76.3 60 56.7
RcHm_v2.0_Chr2g0169431 Rosa chinensis HOM05D007405 ORTHO05D009256 8.4e-12 76.3 59 54.2
Thecc.04G073000 Theobroma cacao HOM05D007405 ORTHO05D009256 8.4e-12 76.3 55 60.0
TPR.G22753 Trifolium pratense HOM05D007405 ORTHO05D009256 8.4e-12 76.3 59 57.6
EL10Ac2g02615 Beta vulgaris HOM05D007405 ORTHO05D009256 1.1e-11 75.9 59 54.2
THA.LOC104823926 Tarenaya hassleriana HOM05D007405 ORTHO05D009256 1.1e-11 75.9 57 57.9
FAN02G3321 Fragaria x ananassa HOM05D007405 ORTHO05D009256 1.4e-11 75.5 59 57.6
FAN02G3519 Fragaria x ananassa HOM05D007405 ORTHO05D009256 1.4e-11 75.5 59 57.6
FAN09G1987 Fragaria x ananassa HOM05D007405 ORTHO05D009256 1.4e-11 75.5 59 57.6
Rhsim10G0030900 Rhododendron simsii HOM05D007405 ORTHO05D009256 1.4e-11 75.5 53 60.4
FAN14G0904 Fragaria x ananassa HOM05D007405 ORTHO05D009256 2.4e-11 74.7 59 55.9
FAN14G4765 Fragaria x ananassa HOM05D007405 ORTHO05D009256 2.4e-11 74.7 59 55.9
Gohir.A07G215301 Gossypium hirsutum HOM05D007405 ORTHO05D009256 2.4e-11 74.7 55 58.2
Gohir.D07G222200 Gossypium hirsutum HOM05D007405 ORTHO05D009256 2.4e-11 74.7 55 58.2
Gorai.001G256500 Gossypium raimondii HOM05D007405 ORTHO05D009256 2.4e-11 74.7 55 58.2
Lsat_1_v5_gn_2_90480 Lactuca sativa HOM05D007405 ORTHO05D009256 2.4e-11 74.7 55 60.0
Lj7A402T45 Lonicera japonica HOM05D007405 ORTHO05D009256 2.4e-11 74.7 53 62.3
MBI08_g09795_MAGBIO Magnolia biondii HOM05D007405 ORTHO05D009256 6.7e-09 66.6 39 71.8
Phvul.001G268500 Phaseolus vulgaris HOM05D007405 ORTHO05D009256 2.5e-08 64.7 62 50.0
Nitab4.5_0000564g0400 Nicotiana tabacum HOM05D007405 ORTHO05D009256 7.4e-08 63.2 61 45.9
HPP92_019727 Vanilla planifolia HOM05D007405 ORTHO05D009256 6.2e-07 60.1 57 50.9
Zm00001eb148940 Zea mays HOM05D007405 ORTHO05D009256 1.8e-06 58.5 57 47.4


User provided reference genes

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