Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO367G0143 Selaginella moellendorffii HOM05D005899 ORTHO05D007445 4.3e-175 617.8 305 100.0
SEGI_33796 Sequoiadendron giganteum HOM05D005899 ORTHO05D007445 6.2e-105 384.8 297 60.6
Lj7P487T33 Lonicera japonica HOM05D005899 ORTHO05D007445 8.3e-102 374.4 301 60.1
Actinidia05763 Actinidia chinensis HOM05D005899 ORTHO05D007445 1.4e-101 373.6 300 58.3
Dinv11553 Davidia involucrata HOM05D005899 ORTHO05D007445 5.4e-101 371.7 302 58.9
DCAR_006615 Daucus carota HOM05D005899 ORTHO05D007445 1.7e-99 366.7 299 59.5
TAR362G0589 Trochodendron aralioides HOM05D005899 ORTHO05D007445 2.3e-99 366.3 300 58.7
CSS0047717 Camellia sinensis var. sinensis HOM05D005899 ORTHO05D007445 3.9e-99 365.5 298 58.1
vmacro14199 Vaccinium macrocarpon HOM05D005899 ORTHO05D007445 2.5e-98 362.8 311 56.6
Oeu064565.1 Olea europaea HOM05D005899 ORTHO05D007445 1.1e-96 357.5 302 57.3
ATR0681G168 Amborella trichopoda HOM05D005899 ORTHO05D007445 1.8e-96 356.7 299 59.2
HPP92_023141 Vanilla planifolia HOM05D005899 ORTHO05D007445 1.8e-96 356.7 298 58.4
Rhsim07G0131800 Rhododendron simsii HOM05D005899 ORTHO05D007445 4.0e-96 355.5 305 56.7
A05p42720 Brassica napus HOM05D005899 ORTHO05D007445 5.2e-96 355.1 296 58.1
FvH4_6g03430 Fragaria vesca HOM05D005899 ORTHO05D007445 5.2e-96 355.1 299 56.5
CDE05G2514 Ceratophyllum demersum HOM05D005899 ORTHO05D007445 1.2e-95 354.0 299 57.9
Aa31LG5G15270 Aethionema arabicum HOM05D005899 ORTHO05D007445 1.5e-95 353.6 294 57.5
CARHR079150 Cardamine hirsuta HOM05D005899 ORTHO05D007445 1.5e-95 353.6 296 56.8
C05p62440 Brassica napus HOM05D005899 ORTHO05D007445 2.0e-95 353.2 296 56.8
BraA05t22981Z Brassica rapa HOM05D005899 ORTHO05D007445 2.0e-95 353.2 296 57.4
arahy.Tifrunner.gnm1.ann1.41KAT0 Arachis hypogaea HOM05D005899 ORTHO05D007445 3.4e-95 352.4 299 56.2
CiPaw.07G006200 Carya illinoinensis HOM05D005899 ORTHO05D007445 4.4e-95 352.1 296 56.4
PGSC0003DMG400022509 Solanum tuberosum HOM05D005899 ORTHO05D007445 4.4e-95 352.1 299 56.9
Cfa006459 Carpinus fangiana HOM05D005899 ORTHO05D007445 5.8e-95 351.7 296 56.4
QL03p024530 Quercus lobata HOM05D005899 ORTHO05D007445 7.5e-95 351.3 299 55.5
MBI01_g13083_MAGBIO Magnolia biondii HOM05D005899 ORTHO05D007445 9.8e-95 350.9 299 56.9
MD12G1237200 Malus domestica HOM05D005899 ORTHO05D007445 1.7e-94 350.1 298 57.4
PGR083G2155 Punica granatum HOM05D005899 ORTHO05D007445 2.2e-94 349.7 295 56.6
Eucgr.L01763 Eucalyptus grandis HOM05D005899 ORTHO05D007445 4.9e-94 348.6 298 56.4
Nitab4.5_0002361g0040 Nicotiana tabacum HOM05D005899 ORTHO05D007445 8.3e-94 347.8 300 54.3
RcHm_v2.0_Chr3g0451931 Rosa chinensis HOM05D005899 ORTHO05D007445 8.3e-94 347.8 297 55.6
Sopen01g041400 Solanum pennellii HOM05D005899 ORTHO05D007445 8.3e-94 347.8 299 56.2
Sed0018425 Sechium edule HOM05D005899 ORTHO05D007445 1.1e-93 347.4 296 56.1
Solyc01g097800.3 Solanum lycopersicum HOM05D005899 ORTHO05D007445 1.1e-93 347.4 299 56.2
SGA_v2.0_scaffold517G52669 Striga asiatica HOM05D005899 ORTHO05D007445 1.1e-93 347.4 301 57.1
AT3G04880 Arabidopsis thaliana HOM05D005899 ORTHO05D007445 1.9e-93 346.7 297 56.2
Ciclev10001942m.g Citrus clementina HOM05D005899 ORTHO05D007445 1.9e-93 346.7 298 55.4
HanXRQChr02g0057281 Helianthus annuus HOM05D005899 ORTHO05D007445 4.1e-93 345.5 290 57.6
Ciclev10001941m.g Citrus clementina HOM05D005899 ORTHO05D007445 5.4e-93 345.1 298 55.4
FAN02G1821 Fragaria x ananassa HOM05D005899 ORTHO05D007445 7.1e-93 344.7 296 55.7
BcaB03g11648 Brassica carinata HOM05D005899 ORTHO05D007445 1.2e-92 344.0 298 56.4
Migut.N00303 Erythranthe guttata HOM05D005899 ORTHO05D007445 1.2e-92 344.0 306 55.6
BolC5t34897H Brassica oleracea HOM05D005899 ORTHO05D007445 1.6e-92 343.6 298 56.0
Prupe.6G339900 Prunus persica HOM05D005899 ORTHO05D007445 1.6e-92 343.6 298 54.4
Glyma.19G243000 Glycine max HOM05D005899 ORTHO05D007445 2.1e-92 343.2 296 55.1
THA.LOC104802822 Tarenaya hassleriana HOM05D005899 ORTHO05D007445 2.1e-92 343.2 301 54.5
VMungo0540G1799 Vigna mungo HOM05D005899 ORTHO05D007445 3.5e-92 342.4 298 56.0
Phvul.006G099800 Phaseolus vulgaris HOM05D005899 ORTHO05D007445 4.6e-92 342.0 296 56.4
Cc02_g31760 Coffea canephora HOM05D005899 ORTHO05D007445 6.0e-92 341.7 304 55.9
TWI56G0091 Tripterygium wilfordii HOM05D005899 ORTHO05D007445 7.8e-92 341.3 303 53.8
FAN14G1139 Fragaria x ananassa HOM05D005899 ORTHO05D007445 1.0e-91 340.9 301 54.2
PSO761G0524 Papaver somniferum HOM05D005899 ORTHO05D007445 2.3e-91 339.7 305 53.4
Duzib128G1862 Durio zibethinus HOM05D005899 ORTHO05D007445 3.0e-91 339.3 299 54.5
ECA233G4289 Erigeron canadensis HOM05D005899 ORTHO05D007445 3.0e-91 339.3 302 56.3
Duzib177G0382 Durio zibethinus HOM05D005899 ORTHO05D007445 3.9e-91 339.0 299 53.8
TPR.G6971 Trifolium pratense HOM05D005899 ORTHO05D007445 3.9e-91 339.0 299 54.5
Sc13g0006240 Simmondsia chinensis HOM05D005899 ORTHO05D007445 5.1e-91 338.6 303 55.8
Oeu044665.1 Olea europaea HOM05D005899 ORTHO05D007445 8.6e-91 337.8 303 54.8
Psat0s62g0080 Pisum sativum HOM05D005899 ORTHO05D007445 8.6e-91 337.8 299 54.8
Thecc.05G288500 Theobroma cacao HOM05D005899 ORTHO05D007445 1.1e-90 337.4 300 54.0
Gorai.007G285000 Gossypium raimondii HOM05D005899 ORTHO05D007445 1.5e-90 337.0 299 52.2
Lalb_Chr15g0076871 Lupinus albus HOM05D005899 ORTHO05D007445 1.5e-90 337.0 296 54.1
AUR62000983 Chenopodium quinoa HOM05D005899 ORTHO05D007445 1.9e-90 336.7 296 53.4
Lsat_1_v5_gn_6_53000 Lactuca sativa HOM05D005899 ORTHO05D007445 3.3e-90 335.9 299 54.2
Manes.09G155900 Manihot esculenta HOM05D005899 ORTHO05D007445 3.3e-90 335.9 303 52.5
CANSAT54G2589 Cannabis sativa HOM05D005899 ORTHO05D007445 4.3e-90 335.5 305 52.8
Cpa.g.sc117.66 Carica papaya HOM05D005899 ORTHO05D007445 5.6e-90 335.1 301 54.8
Potri.005G050600 Populus trichocarpa HOM05D005899 ORTHO05D007445 5.6e-90 335.1 303 52.5
Gohir.A11G255200 Gossypium hirsutum HOM05D005899 ORTHO05D007445 7.3e-90 334.7 299 51.8
Medtr7g114750 Medicago truncatula HOM05D005899 ORTHO05D007445 7.3e-90 334.7 299 53.5
Sabra15G0068500 Salix brachista HOM05D005899 ORTHO05D007445 1.2e-89 334.0 302 52.0
EL10Ac4g09173 Beta vulgaris HOM05D005899 ORTHO05D007445 1.6e-89 333.6 300 52.3
Gohir.D11G264900 Gossypium hirsutum HOM05D005899 ORTHO05D007445 1.6e-89 333.6 299 51.8
Ca_09408_v3 Cicer arietinum L. HOM05D005899 ORTHO05D007445 2.8e-89 332.8 300 53.3
Sp3g03700 Schrenkiella parvula HOM05D005899 ORTHO05D007445 4.7e-89 332.0 296 54.4
Lj1g0012490 Lotus japonicus HOM05D005899 ORTHO05D007445 6.2e-89 331.6 301 53.2
Os01g0542000 Oryza sativa ssp. japonica HOM05D005899 ORTHO05D007445 1.1e-88 330.9 301 55.5
FAN05G2237 Fragaria x ananassa HOM05D005899 ORTHO05D007445 5.8e-87 325.1 298 54.0
Zm00001eb162780 Zea mays HOM05D005899 ORTHO05D007445 5.8e-87 325.1 299 55.2
Pp3c6_4500 Physcomitrium patens HOM05D005899 ORTHO05D007445 4.9e-86 322.0 410 44.6
SHI18352 Sapria himalayana HOM05D005899 ORTHO05D007445 3.0e-83 312.8 304 49.0
QL03p024564 Quercus lobata HOM05D005899 ORTHO05D007445 8.9e-80 301.2 300 51.0
CAN.G134.162 Capsicum annuum HOM05D005899 ORTHO05D007445 6.4e-78 295.0 299 50.2
Cfa006460 Carpinus fangiana HOM05D005899 ORTHO05D007445 8.4e-78 294.7 283 53.4
TPR.G8897 Trifolium pratense HOM05D005899 ORTHO05D007445 8.4e-78 294.7 260 55.4
AL3G15170 Arabidopsis lyrata HOM05D005899 ORTHO05D007445 3.3e-74 282.7 229 58.5
Nn4g26305 Nelumbo nucifera HOM05D005899 ORTHO05D007445 3.4e-71 272.7 247 55.9
Sabra15G0041400 Salix brachista HOM05D005899 ORTHO05D007445 1.1e-66 257.7 302 44.4
Haze_04330 Corylus avellana HOM05D005899 ORTHO05D007445 1.6e-65 253.8 277 46.6
Eucgr.L02186 Eucalyptus grandis HOM05D005899 ORTHO05D007445 2.0e-63 246.9 294 43.9
Atru.chr2.732 Acer truncatum HOM05D005899 ORTHO05D007445 1.4e-61 240.7 232 50.9
Atru.chr2.745 Acer truncatum HOM05D005899 ORTHO05D007445 1.4e-61 240.7 232 50.9
Nitab4.5_0013433g0050 Nicotiana tabacum HOM05D005899 ORTHO05D007445 2.4e-61 240.0 190 55.3
Eucgr.B01712 Eucalyptus grandis HOM05D005899 ORTHO05D007445 1.2e-60 237.7 286 44.1
Eucgr.L02099 Eucalyptus grandis HOM05D005899 ORTHO05D007445 3.5e-60 236.1 204 56.4
Peaxi162Scf00404g00009 Petunia axillaris HOM05D005899 ORTHO05D007445 5.1e-59 232.3 202 53.0
FAN09G0887 Fragaria x ananassa HOM05D005899 ORTHO05D007445 1.9e-58 230.3 298 42.6
Ah.04g162380 Amaranthus hybridus HOM05D005899 ORTHO05D007445 1.2e-52 211.1 168 57.7
Actinidia36917 Actinidia chinensis HOM05D005899 ORTHO05D007445 4.6e-52 209.1 205 51.7
Atru.chr2.742 Acer truncatum HOM05D005899 ORTHO05D007445 1.5e-50 204.1 230 47.0
Dinv12477 Davidia involucrata HOM05D005899 ORTHO05D007445 9.7e-50 201.4 134 66.4
AUR62004985 Chenopodium quinoa HOM05D005899 ORTHO05D007445 1.6e-49 200.7 259 41.7
Eucgr.B01710 Eucalyptus grandis HOM05D005899 ORTHO05D007445 1.8e-48 197.2 286 38.8
Carub.0003s0407 Capsella rubella HOM05D005899 ORTHO05D007445 2.2e-46 190.3 146 58.9
Sabra15G0056900 Salix brachista HOM05D005899 ORTHO05D007445 3.3e-42 176.4 126 57.9
BcaNung06538 Brassica carinata HOM05D005899 ORTHO05D007445 7.4e-42 175.3 155 54.2
Sabra15G0057000 Salix brachista HOM05D005899 ORTHO05D007445 7.4e-42 175.3 146 52.7
Sabra15G0068600 Salix brachista HOM05D005899 ORTHO05D007445 7.4e-42 175.3 146 52.7
SGA_v2.0_scaffold31G12627 Striga asiatica HOM05D005899 ORTHO05D007445 4.1e-40 169.5 124 59.7
FAN05G4786 Fragaria x ananassa HOM05D005899 ORTHO05D007445 1.2e-39 167.9 101 69.3
unitig_744.g24569 Utricularia gibba HOM05D005899 ORTHO05D007445 1.5e-39 167.5 185 47.6
Medtr8g098320 Medicago truncatula HOM05D005899 ORTHO05D007445 2.1e-36 157.1 172 49.4
AUR62004976 Chenopodium quinoa HOM05D005899 ORTHO05D007445 3.6e-36 156.4 154 50.0
Cfa006462 Carpinus fangiana HOM05D005899 ORTHO05D007445 1.2e-31 141.4 121 53.7
Medtr7g114730 Medicago truncatula HOM05D005899 ORTHO05D007445 2.6e-31 140.2 158 44.9
FAN05G4109 Fragaria x ananassa HOM05D005899 ORTHO05D007445 1.0e-22 111.7 146 41.8
Carub.0003s0408 Capsella rubella HOM05D005899 ORTHO05D007445 1.5e-21 107.8 95 55.8
TPR.G21843 Trifolium pratense HOM05D005899 ORTHO05D007445 2.7e-20 103.6 115 47.8
PRCOL_00001982 Prasinoderma coloniale HOM05D005899 ORTHO05D007445 4.8e-17 92.8 175 35.4
TAR140G0002 Trochodendron aralioides HOM05D005899 ORTHO05D007445 4.8e-17 92.8 108 46.3
TAR623G1042 Trochodendron aralioides HOM05D005899 ORTHO05D007445 4.8e-17 92.8 108 46.3
TAR375G0990 Trochodendron aralioides HOM05D005899 ORTHO05D007445 2.4e-16 90.5 101 48.5
TAR636G1090 Trochodendron aralioides HOM05D005899 ORTHO05D007445 4.5e-15 86.3 110 42.7
unitig_21.g20175 Utricularia gibba HOM05D005899 ORTHO05D007445 1.3e-14 84.7 73 56.2
RcHm_v2.0_Chr7g0217791 Rosa chinensis HOM05D005899 ORTHO05D007445 1.9e-13 80.9 143 35.7
TAR625G0400 Trochodendron aralioides HOM05D005899 ORTHO05D007445 1.0e-11 75.1 95 45.3
AUR62000980 Chenopodium quinoa HOM05D005899 ORTHO05D007445 1.4e-11 74.7 78 50.0
TAR375G0306 Trochodendron aralioides HOM05D005899 ORTHO05D007445 5.0e-06 56.2 42 61.9


User provided reference genes

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