Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO365G0010 Selaginella moellendorffii HOM05D006967 ORTHO05D008692 1.7e-105 386.0 190 100.0
AagrBONN_evm.TU.Sc2ySwM_368.2736 Anthoceros agrestis HOM05D006967 ORTHO05D008692 2.2e-28 129.8 164 39.0
SEGI_11534 Sequoiadendron giganteum HOM05D006967 ORTHO05D008692 1.1e-27 127.5 160 46.2
Sabra03G0114400 Salix brachista HOM05D006967 ORTHO05D008692 1.1e-22 110.9 171 40.4
Duzib177G0925 Durio zibethinus HOM05D006967 ORTHO05D008692 5.3e-22 108.6 163 38.0
CBR_g19989 Chara braunii HOM05D006967 ORTHO05D008692 1.2e-21 107.5 190 33.7
Thecc.05G313500 Theobroma cacao HOM05D006967 ORTHO05D008692 1.5e-21 107.1 154 38.3
Potri.003G157800 Populus trichocarpa HOM05D006967 ORTHO05D008692 4.5e-21 105.5 158 39.2
SHI28117 Sapria himalayana HOM05D006967 ORTHO05D008692 3.8e-20 102.4 156 36.5
Gohir.A13G109700 Gossypium hirsutum HOM05D006967 ORTHO05D008692 5.0e-20 102.1 151 37.7
Gorai.013G126100 Gossypium raimondii HOM05D006967 ORTHO05D008692 8.5e-20 101.3 151 37.7
CBR_g19993 Chara braunii HOM05D006967 ORTHO05D008692 1.9e-19 100.1 159 35.2
PSO541G0117 Papaver somniferum HOM05D006967 ORTHO05D008692 1.9e-19 100.1 155 36.1
TAR624G0936 Trochodendron aralioides HOM05D006967 ORTHO05D008692 1.9e-19 100.1 158 34.2
Manes.18G124500 Manihot esculenta HOM05D006967 ORTHO05D008692 9.4e-19 97.8 158 36.1
PSO675G8399 Papaver somniferum HOM05D006967 ORTHO05D008692 9.4e-19 97.8 165 35.2
Ah.11g050600 Amaranthus hybridus HOM05D006967 ORTHO05D008692 1.6e-18 97.1 159 34.6
CiPaw.09G141400 Carya illinoinensis HOM05D006967 ORTHO05D008692 1.6e-18 97.1 158 33.5
Glyma.16G096000 Glycine max HOM05D006967 ORTHO05D008692 1.6e-18 97.1 163 37.4
COL.COLO4_10527 Corchorus olitorius HOM05D001999 ORTHO05D001994 2.1e-18 96.7 167 34.7
Gohir.D13G112300 Gossypium hirsutum HOM05D006967 ORTHO05D008692 2.1e-18 96.7 134 39.6
Phvul.003G274600 Phaseolus vulgaris HOM05D006967 ORTHO05D008692 3.6e-18 95.9 158 34.2
Eucgr.E04333 Eucalyptus grandis HOM05D006967 ORTHO05D008692 4.6e-18 95.5 152 36.8
CANSAT35G1213 Cannabis sativa HOM05D006967 ORTHO05D008692 6.1e-18 95.1 150 39.3
CAN.G40.7 Capsicum annuum HOM05D006967 ORTHO05D008692 7.9e-18 94.7 161 36.6
Sopen01g015960 Solanum pennellii HOM05D006967 ORTHO05D008692 1.4e-17 94.0 158 31.6
TWI63G0275 Tripterygium wilfordii HOM05D006967 ORTHO05D008692 1.4e-17 94.0 159 33.3
C01p14260 Brassica napus HOM05D006967 ORTHO05D008692 1.8e-17 93.6 161 37.9
A01p12010 Brassica napus HOM05D006967 ORTHO05D008692 2.3e-17 93.2 161 37.9
BraA01t01143Z Brassica rapa HOM05D006967 ORTHO05D008692 2.3e-17 93.2 161 37.9
Aqoxy1G01340 Aquilegia oxysepala HOM05D006967 ORTHO05D008692 3.0e-17 92.8 167 32.3
Lalb_Chr09g0334571 Lupinus albus HOM05D006967 ORTHO05D008692 3.0e-17 92.8 158 32.3
Migut.M02039 Erythranthe guttata HOM05D006967 ORTHO05D008692 3.9e-17 92.4 156 34.0
RcHm_v2.0_Chr5g0022471 Rosa chinensis HOM05D006967 ORTHO05D008692 3.9e-17 92.4 152 36.8
Dinv05283 Davidia involucrata HOM05D006967 ORTHO05D008692 5.1e-17 92.0 157 36.3
Migut.K01517 Erythranthe guttata HOM05D006967 ORTHO05D008692 5.1e-17 92.0 157 36.3
BolC1t01391H Brassica oleracea HOM05D006967 ORTHO05D008692 6.7e-17 91.7 161 37.9
BcaC09g51322 Brassica carinata HOM05D006967 ORTHO05D008692 8.8e-17 91.3 161 37.3
ClCG01G000040 Citrullus lanatus HOM05D006967 ORTHO05D008692 8.8e-17 91.3 159 35.8
Thhalv10024898m.g Eutrema salsugineum HOM05D006967 ORTHO05D008692 8.8e-17 91.3 154 37.0
Oeu008739.3 Olea europaea HOM05D006967 ORTHO05D008692 8.8e-17 91.3 130 40.0
Sp7g18650 Schrenkiella parvula HOM05D006967 ORTHO05D008692 1.1e-16 90.9 154 36.4
BcaNung03720 Brassica carinata HOM05D006967 ORTHO05D008692 1.5e-16 90.5 161 36.6
AL7G33600 Arabidopsis lyrata HOM05D006967 ORTHO05D008692 2.0e-16 90.1 156 38.5
Haze_05177 Corylus avellana HOM05D006967 ORTHO05D008692 2.5e-16 89.7 176 29.5
DCAR_004368 Daucus carota HOM05D006967 ORTHO05D008692 3.3e-16 89.4 160 35.6
SMO176G0004 Selaginella moellendorffii HOM05D006967 ORTHO05D008692 5.7e-16 88.6 42 97.6
Medtr8g070630 Medicago truncatula HOM05D006967 ORTHO05D008692 7.4e-16 88.2 164 34.1
Sed0023777 Sechium edule HOM05D006967 ORTHO05D008692 9.7e-16 87.8 161 36.6
BcaNung03721 Brassica carinata HOM05D006967 ORTHO05D008692 1.3e-15 87.4 161 35.4
Carub.0007s2087 Capsella rubella HOM05D006967 ORTHO05D008692 1.3e-15 87.4 150 37.3
Aa31LG6G2720 Aethionema arabicum HOM05D006967 ORTHO05D008692 1.7e-15 87.0 154 33.8
Ciclev10015668m.g Citrus clementina HOM05D006967 ORTHO05D008692 1.7e-15 87.0 154 33.1
FAN11G3906 Fragaria x ananassa HOM05D006967 ORTHO05D008692 1.7e-15 87.0 151 38.4
THA.LOC104806234 Tarenaya hassleriana HOM05D006967 ORTHO05D008692 2.2e-15 86.7 156 36.5
Lj4g0002657 Lotus japonicus HOM05D006967 ORTHO05D008692 3.7e-15 85.9 158 32.3
Nitab4.5_0001253g0030 Nicotiana tabacum HOM05D006967 ORTHO05D008692 3.7e-15 85.9 138 34.1
Cpa.g.sc30.57 Carica papaya HOM05D006967 ORTHO05D008692 6.3e-15 85.1 161 34.8
FvH4_3g13520 Fragaria vesca HOM05D006967 ORTHO05D008692 6.3e-15 85.1 150 38.0
HPP92_009939 Vanilla planifolia HOM05D006967 ORTHO05D008692 6.3e-15 85.1 160 31.2
Nitab4.5_0000217g0010 Nicotiana tabacum HOM05D006967 ORTHO05D008692 8.2e-15 84.7 138 34.1
Sc05g0001460 Simmondsia chinensis HOM05D006967 ORTHO05D008692 8.2e-15 84.7 156 31.4
MELO3C005917.2 Cucumis melo HOM05D006967 ORTHO05D008692 1.1e-14 84.3 173 32.4
CsaV3_5G000140 Cucumis sativus L. HOM05D006967 ORTHO05D008692 1.4e-14 84.0 173 32.4
MD10G1221200 Malus domestica HOM05D006967 ORTHO05D008692 2.4e-14 83.2 151 35.8
ECA238G0649 Erigeron canadensis HOM05D006967 ORTHO05D008692 3.1e-14 82.8 170 34.1
FAN25G2282 Fragaria x ananassa HOM05D006967 ORTHO05D008692 4.1e-14 82.4 150 36.7
FAN21G4071 Fragaria x ananassa HOM05D006967 ORTHO05D008692 5.3e-14 82.0 150 37.3
Cc09_g04480 Coffea canephora HOM05D006967 ORTHO05D008692 1.2e-13 80.9 144 40.3
MSTRG.24877 Avicennia marina HOM05D006967 ORTHO05D008692 1.5e-13 80.5 178 31.5
vmacro03578 Vaccinium macrocarpon HOM05D006967 ORTHO05D008692 1.5e-13 80.5 169 33.1
FAN16G1037 Fragaria x ananassa HOM05D006967 ORTHO05D008692 4.5e-13 79.0 150 36.7
HanXRQChr14g0439851 Helianthus annuus HOM05D006967 ORTHO05D008692 1.3e-12 77.4 160 31.2
CSS0034338 Camellia sinensis var. sinensis HOM05D006967 ORTHO05D008692 5.0e-12 75.5 81 45.7
EL10Ac5g10560 Beta vulgaris HOM05D006967 ORTHO05D008692 1.1e-11 74.3 164 30.5
VMungo0251G0412 Vigna mungo HOM05D006967 ORTHO05D008692 4.2e-11 72.4 124 35.5
ATR0737G179 Amborella trichopoda HOM05D006967 ORTHO05D008692 5.5e-11 72.0 84 41.7
MBI10_g30431_MAGBIO Magnolia biondii HOM05D006967 ORTHO05D008692 7.2e-11 71.6 96 38.5
Hund09497 Selenicereus undatus HOM05D006967 ORTHO05D008692 1.6e-10 70.5 200 28.5
Migut.G00899 Erythranthe guttata HOM05D006967 ORTHO05D008692 2.1e-10 70.1 83 43.4
QL11p010599 Quercus lobata HOM05D006967 ORTHO05D008692 2.1e-10 70.1 199 25.1
arahy.Tifrunner.gnm1.ann1.S5Z5QJ Arachis hypogaea HOM05D006967 ORTHO05D008692 3.6e-10 69.3 181 29.3
arahy.Tifrunner.gnm1.ann1.B3JMJ8 Arachis hypogaea HOM05D006967 ORTHO05D008692 6.1e-10 68.6 203 25.6
Solyc01g049910.4 Solanum lycopersicum HOM05D006967 ORTHO05D008692 6.1e-10 68.6 135 28.1
SGA_v2.0_scaffold62G21391 Striga asiatica HOM05D006967 ORTHO05D008692 4.4e-08 62.4 121 28.9
TPR.G19829 Trifolium pratense HOM05D006967 ORTHO05D008692 1.3e-07 60.8 157 26.1
Lj2A340G21 Lonicera japonica HOM05D006967 ORTHO05D008692 3.7e-07 59.3 138 31.9
arahy.Tifrunner.gnm1.ann1.IV6A0X Arachis hypogaea HOM05D006967 ORTHO05D008692 8.2e-07 58.2 145 28.3
Peaxi162Scf00715g00310 Petunia axillaris HOM05D006967 ORTHO05D008692 1.4e-06 57.4 140 33.6
CARHR227130 Cardamine hirsuta HOM05D006967 ORTHO05D008692 9.1e-06 54.7 53 49.1


User provided reference genes

Program Settings