Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO358G0374 Selaginella moellendorffii HOM05D005995 ORTHO05D007362 5.2e-54 214.2 110 100.0
SEGI_16655 Sequoiadendron giganteum HOM05D005995 ORTHO05D007362 3.4e-29 131.7 99 62.6
Sc06g0010410 Simmondsia chinensis HOM05D005995 ORTHO05D007362 1.7e-28 129.4 100 65.0
Mapoly0008s0254 Marchantia polymorpha HOM05D005995 ORTHO05D007362 3.7e-28 128.3 100 61.0
MD03G1063100 Malus domestica HOM05D005995 ORTHO05D007362 9.2e-27 123.6 100 63.0
Oeu031050.1 Olea europaea HOM05D005995 ORTHO05D007362 9.2e-27 123.6 99 62.6
COL.COLO4_11080 Corchorus olitorius HOM05D005995 ORTHO05D007362 1.2e-26 123.2 99 61.6
Hund06617 Selenicereus undatus HOM05D005995 ORTHO05D007362 1.2e-26 123.2 99 61.6
vmacro02942 Vaccinium macrocarpon HOM05D005995 ORTHO05D007362 1.2e-26 123.2 100 64.0
PSO017G3188 Papaver somniferum HOM05D005995 ORTHO05D007362 1.6e-26 122.9 99 62.6
GSVIVG01024692001 Vitis vinifera HOM05D005995 ORTHO05D007362 1.6e-26 122.9 99 65.7
ATR0681G053 Amborella trichopoda HOM05D005995 ORTHO05D007362 2.1e-26 122.5 99 61.6
arahy.Tifrunner.gnm1.ann1.6174C5 Arachis hypogaea HOM05D005995 ORTHO05D007362 2.7e-26 122.1 99 62.6
arahy.Tifrunner.gnm1.ann1.SCP5PP Arachis hypogaea HOM05D005995 ORTHO05D007362 2.7e-26 122.1 99 62.6
QL01p039263 Quercus lobata HOM05D005995 ORTHO05D007362 2.7e-26 122.1 99 63.6
Nitab4.5_0013485g0010 Nicotiana tabacum HOM05D005995 ORTHO05D007362 4.6e-26 121.3 99 61.6
PSO170G4292 Papaver somniferum HOM05D005995 ORTHO05D007362 4.6e-26 121.3 99 61.6
Phvul.006G070800 Phaseolus vulgaris HOM05D005995 ORTHO05D007362 4.6e-26 121.3 99 62.6
unitig_62.g23487 Utricularia gibba HOM05D005995 ORTHO05D007362 4.6e-26 121.3 99 59.6
Atru.chr3.4142 Acer truncatum HOM05D005995 ORTHO05D007362 6.0e-26 120.9 102 61.8
Actinidia23218 Actinidia chinensis HOM05D005995 ORTHO05D007362 6.0e-26 120.9 99 62.6
Nitab4.5_0002043g0030 Nicotiana tabacum HOM05D005995 ORTHO05D007362 6.0e-26 120.9 99 61.6
Rhsim13G0066700 Rhododendron simsii HOM05D005995 ORTHO05D007362 6.0e-26 120.9 99 62.6
Sopen06g033540 Solanum pennellii HOM05D005995 ORTHO05D007362 6.0e-26 120.9 99 61.6
PGSC0003DMG400030447 Solanum tuberosum HOM05D005995 ORTHO05D007362 6.0e-26 120.9 99 61.6
Aqoxy4G02443 Aquilegia oxysepala HOM05D005995 ORTHO05D007362 7.8e-26 120.6 100 60.0
CANSAT54G2854 Cannabis sativa HOM05D005995 ORTHO05D007362 7.8e-26 120.6 98 63.3
Cpa.g.sc2.418 Carica papaya HOM05D005995 ORTHO05D007362 7.8e-26 120.6 100 62.0
Gohir.A13G233500 Gossypium hirsutum HOM05D005995 ORTHO05D007362 7.8e-26 120.6 99 62.6
Lalb_Chr20g0114841 Lupinus albus HOM05D005995 ORTHO05D007362 7.8e-26 120.6 99 61.6
MSTRG.10034 Avicennia marina HOM05D005995 ORTHO05D007362 1.0e-25 120.2 99 61.6
Potri.001G279700 Populus trichocarpa HOM05D005995 ORTHO05D007362 1.0e-25 120.2 100 61.0
Potri.009G074400 Populus trichocarpa HOM05D005995 ORTHO05D007362 1.0e-25 120.2 100 61.0
VMungo0540G0986 Vigna mungo HOM05D005995 ORTHO05D007362 1.0e-25 120.2 99 61.6
Duzib170G0863 Durio zibethinus HOM05D005995 ORTHO05D007362 1.3e-25 119.8 100 61.0
Lalb_Chr18g0051191 Lupinus albus HOM05D005995 ORTHO05D007362 1.7e-25 119.4 99 60.6
PGR031G2980 Punica granatum HOM05D005995 ORTHO05D007362 1.7e-25 119.4 99 59.6
Sabra16G0173300 Salix brachista HOM05D005995 ORTHO05D007362 1.7e-25 119.4 99 61.6
Solyc06g082160.4 Solanum lycopersicum HOM05D005995 ORTHO05D007362 1.7e-25 119.4 99 60.6
TPR.G32896 Trifolium pratense HOM05D005995 ORTHO05D007362 1.7e-25 119.4 99 59.6
Cfa011735 Carpinus fangiana HOM05D005995 ORTHO05D007362 2.3e-25 119.0 99 61.6
SGA_v2.0_scaffold371G50155 Striga asiatica HOM05D005995 ORTHO05D007362 2.3e-25 119.0 99 59.6
Thecc.09G353200 Theobroma cacao HOM05D005995 ORTHO05D007362 2.3e-25 119.0 99 60.6
Actinidia02782 Actinidia chinensis HOM05D005995 ORTHO05D007362 3.0e-25 118.6 99 61.6
FAN25G2223 Fragaria x ananassa HOM05D005995 ORTHO05D007362 3.0e-25 118.6 99 61.6
CDE10G1344 Ceratophyllum demersum HOM05D005995 ORTHO05D007362 3.9e-25 118.2 99 61.6
AUR62023851 Chenopodium quinoa HOM05D005995 ORTHO05D007362 3.9e-25 118.2 100 62.0
Haze_24375 Corylus avellana HOM05D005995 ORTHO05D007362 3.9e-25 118.2 99 61.6
FAN21G0787 Fragaria x ananassa HOM05D005995 ORTHO05D007362 3.9e-25 118.2 99 61.6
Glyma.11G168600 Glycine max HOM05D005995 ORTHO05D007362 3.9e-25 118.2 99 60.6
Medtr3g465040 Medicago truncatula HOM05D005995 ORTHO05D007362 3.9e-25 118.2 99 58.6
FvH4_3g39150 Fragaria vesca HOM05D005995 ORTHO05D007362 5.1e-25 117.9 99 60.6
FAN11G1452 Fragaria x ananassa HOM05D005995 ORTHO05D007362 5.1e-25 117.9 99 60.6
Lj1P130T21 Lonicera japonica HOM05D005995 ORTHO05D007362 5.1e-25 117.9 99 61.6
Nn2g14523 Nelumbo nucifera HOM05D005995 ORTHO05D007362 5.1e-25 117.9 99 61.6
AagrBONN_evm.TU.Sc2ySwM_344.2127 Anthoceros agrestis HOM05D005995 ORTHO05D007362 6.6e-25 117.5 102 59.8
CSS0037016 Camellia sinensis var. sinensis HOM05D005995 ORTHO05D007362 6.6e-25 117.5 99 61.6
CSS0047754 Camellia sinensis var. sinensis HOM05D005995 ORTHO05D007362 6.6e-25 117.5 99 61.6
Ciclev10029374m.g Citrus clementina HOM05D005995 ORTHO05D007362 6.6e-25 117.5 99 60.6
Eucgr.B02232 Eucalyptus grandis HOM05D005995 ORTHO05D007362 6.6e-25 117.5 99 60.6
Lj6g0019722 Lotus japonicus HOM05D005995 ORTHO05D007362 6.6e-25 117.5 99 59.6
MD11G1066600 Malus domestica HOM05D005995 ORTHO05D007362 6.6e-25 117.5 99 60.6
Dinv09649 Davidia involucrata HOM05D002227 ORTHO05D002337 8.6e-25 117.1 99 60.6
Glyma.18G060000 Glycine max HOM05D005995 ORTHO05D007362 8.6e-25 117.1 99 59.6
Manes.17G003200 Manihot esculenta HOM05D005995 ORTHO05D007362 8.6e-25 117.1 99 60.6
HPP92_012020 Vanilla planifolia HOM05D005995 ORTHO05D007362 8.6e-25 117.1 99 62.6
Cc01_g14560 Coffea canephora HOM05D005995 ORTHO05D007362 1.1e-24 116.7 99 59.6
RcHm_v2.0_Chr5g0070551 Rosa chinensis HOM05D005995 ORTHO05D007362 1.1e-24 116.7 99 59.6
Prupe.6G053100 Prunus persica HOM05D005995 ORTHO05D007362 1.5e-24 116.3 99 59.6
Sabra09G0056500 Salix brachista HOM05D005995 ORTHO05D007362 1.5e-24 116.3 99 60.6
TAR623G0738 Trochodendron aralioides HOM05D005995 ORTHO05D007362 1.9e-24 115.9 99 59.6
TAR131G0002 Trochodendron aralioides HOM05D005995 ORTHO05D007362 2.5e-24 115.5 99 59.6
Ca_14969_v3 Cicer arietinum L. HOM05D005995 ORTHO05D007362 3.3e-24 115.2 100 57.0
DCAR_015647 Daucus carota HOM05D005995 ORTHO05D007362 3.3e-24 115.2 99 59.6
Migut.N00147 Erythranthe guttata HOM05D005995 ORTHO05D007362 3.3e-24 115.2 99 59.6
Pp3c7_14690 Physcomitrium patens HOM05D005995 ORTHO05D007362 3.3e-24 115.2 100 60.0
FAN16G3099 Fragaria x ananassa HOM05D005995 ORTHO05D007362 4.3e-24 114.8 99 59.6
Duzib168G2258 Durio zibethinus HOM05D005995 ORTHO05D007362 5.6e-24 114.4 99 57.6
HanXRQChr11g0334701 Helianthus annuus HOM05D005995 ORTHO05D007362 5.6e-24 114.4 99 58.6
MBI03_g03955_MAGBIO Magnolia biondii HOM05D005995 ORTHO05D007362 5.6e-24 114.4 99 60.6
CAN.G1095.10 Capsicum annuum HOM05D005995 ORTHO05D007362 7.3e-24 114.0 99 57.6
ECA248G1932 Erigeron canadensis HOM05D005995 ORTHO05D007362 1.2e-23 113.2 99 58.6
EL10Ac3g05994 Beta vulgaris HOM05D005995 ORTHO05D007362 1.6e-23 112.8 100 57.0
CiPaw.13G073700 Carya illinoinensis HOM05D005995 ORTHO05D007362 1.6e-23 112.8 99 59.6
CiPaw.14G056700 Carya illinoinensis HOM05D005995 ORTHO05D007362 1.6e-23 112.8 99 59.6
Psat0s2070g0120 Pisum sativum HOM05D005995 ORTHO05D007362 2.8e-23 112.1 99 56.6
BcaNung06849 Brassica carinata HOM05D002227 ORTHO05D007362 4.7e-23 111.3 105 56.2
Aa31LG11G350 Aethionema arabicum HOM05D005995 ORTHO05D007362 6.2e-23 110.9 99 57.6
Thhalv10014805m.g Eutrema salsugineum HOM05D005995 ORTHO05D007362 6.2e-23 110.9 99 57.6
Sp6g20270 Schrenkiella parvula HOM05D005995 ORTHO05D007362 8.1e-23 110.5 99 57.6
BcaB01g04505 Brassica carinata HOM05D005995 ORTHO05D007362 1.4e-22 109.8 99 56.6
BcaC01g06637 Brassica carinata HOM05D005995 ORTHO05D007362 1.4e-22 109.8 99 56.6
A03p12120 Brassica napus HOM05D005995 ORTHO05D007362 1.4e-22 109.8 99 56.6
BolC3t13867H Brassica oleracea HOM05D005995 ORTHO05D007362 1.4e-22 109.8 99 56.6
BraA03t10524Z Brassica rapa HOM05D005995 ORTHO05D007362 1.4e-22 109.8 99 56.6
AT5G58575 Arabidopsis thaliana HOM05D005995 ORTHO05D007362 1.8e-22 109.4 99 56.6
Carub.0008s1918 Capsella rubella HOM05D005995 ORTHO05D007362 1.8e-22 109.4 99 56.6
CDE10G0962 Ceratophyllum demersum HOM05D005995 ORTHO05D007362 1.8e-22 109.4 99 57.6
CARHR272410 Cardamine hirsuta HOM05D005995 ORTHO05D007362 3.1e-22 108.6 99 56.6
Lsat_1_v5_gn_5_173181 Lactuca sativa HOM05D005995 ORTHO05D007362 3.1e-22 108.6 99 56.6
AL8G34810 Arabidopsis lyrata HOM05D005995 ORTHO05D007362 4.0e-22 108.2 99 55.6
THA.LOC104799390 Tarenaya hassleriana HOM05D005995 ORTHO05D007362 6.8e-22 107.5 99 56.6
TAR633G2447 Trochodendron aralioides HOM05D005995 ORTHO05D007362 8.9e-22 107.1 99 56.6
MD11G1152800 Malus domestica HOM05D005995 ORTHO05D007362 2.6e-21 105.5 103 52.4
Gohir.D13G239100 Gossypium hirsutum HOM05D005995 ORTHO05D007362 2.2e-20 102.4 99 51.5
Gorai.013G270000 Gossypium raimondii HOM05D005995 ORTHO05D007362 2.2e-20 102.4 99 51.5
Peaxi162Scf00540g00015 Petunia axillaris HOM05D005995 ORTHO05D007362 2.9e-20 102.1 99 53.5
Pp3c11_11530 Physcomitrium patens HOM05D001687 ORTHO05D001608 2.9e-20 102.1 93 55.9
ClCG03G000500 Citrullus lanatus HOM05D005995 ORTHO05D007362 3.8e-20 101.7 99 52.5
MELO3C020526.2 Cucumis melo HOM05D005995 ORTHO05D007362 3.8e-20 101.7 99 52.5
CsaV3_1G036430 Cucumis sativus L. HOM05D005995 ORTHO05D007362 4.9e-20 101.3 99 51.5
Sed0015986 Sechium edule HOM05D005995 ORTHO05D007362 8.4e-20 100.5 99 52.5
Os05g0351500 Oryza sativa ssp. japonica HOM05D005995 ORTHO05D007362 7.1e-19 97.4 99 50.5
MD11G1066800 Malus domestica HOM05D005995 ORTHO05D007362 3.5e-18 95.1 99 52.5
TWI79G0924 Tripterygium wilfordii HOM05D005995 ORTHO05D007362 7.8e-18 94.0 100 50.0
Zm00001eb286290 Zea mays HOM05D005995 ORTHO05D007362 3.0e-17 92.0 107 49.5
CBR_g49952 Chara braunii HOM05D000019 ORTHO05D000002 9.6e-16 87.0 134 41.8
Gohir.D05G107900 Gossypium hirsutum HOM05D005995 ORTHO05D007362 1.6e-15 86.3 100 47.0
TWI31G1135 Tripterygium wilfordii HOM05D005995 ORTHO05D007362 1.6e-15 86.3 99 47.5
Gorai.009G112000 Gossypium raimondii HOM05D005995 ORTHO05D007362 4.7e-15 84.7 99 46.5
AUR62002337 Chenopodium quinoa HOM05D005995 ORTHO05D007362 8.1e-15 84.0 78 53.8
Gohir.A05G107700 Gossypium hirsutum HOM05D005995 ORTHO05D007362 2.4e-14 82.4 99 45.5
BcaC01g06639 Brassica carinata HOM05D005995 ORTHO05D007362 6.9e-14 80.9 99 45.5
Sed0014404 Sechium edule HOM05D005995 ORTHO05D007362 6.9e-14 80.9 99 46.5
C03p14210 Brassica napus HOM05D005995 ORTHO05D007362 1.2e-13 80.1 99 46.5
Cre17.g719550 Chlamydomonas reinhardtii HOM05D005995 ORTHO05D007362 3.0e-09 65.5 40 70.0
MD11G1153100 Malus domestica HOM05D005995 ORTHO05D007362 1.1e-08 63.5 77 46.8
HPP92_013780 Vanilla planifolia HOM05D005995 ORTHO05D007362 3.3e-08 62.0 81 45.7
Pp3c4_14820 Physcomitrium patens HOM05D005995 ORTHO05D311899 4.0e-06 55.1 100 34.0


User provided reference genes

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