Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO356G0095 Selaginella moellendorffii HOM05D006649 ORTHO05D008754 2.7e-100 368.6 180 100.0
Pp3c2_15060 Physcomitrium patens HOM05D006649 ORTHO05D008754 3.9e-67 258.5 174 73.0
Medtr4g055030 Medicago truncatula HOM05D006649 ORTHO05D008754 2.2e-62 242.7 175 65.7
Potri.009G146800 Populus trichocarpa HOM05D006649 ORTHO05D008754 1.4e-61 240.0 173 66.5
TWI79G0266 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 1.4e-61 240.0 173 65.9
TWI79G0985 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 1.4e-61 240.0 173 65.9
CAN.G644.11 Capsicum annuum HOM05D006649 ORTHO05D008754 4.2e-61 238.4 176 64.8
Nn2g14062 Nelumbo nucifera HOM05D006649 ORTHO05D008754 4.2e-61 238.4 173 65.9
ATR0820G177 Amborella trichopoda HOM05D006649 ORTHO05D008754 5.5e-61 238.0 172 66.3
Sabra09G0115900 Salix brachista HOM05D006649 ORTHO05D008754 5.5e-61 238.0 173 65.3
Hund20864 Selenicereus undatus HOM05D006649 ORTHO05D008754 5.5e-61 238.0 172 66.3
Cfa010067 Carpinus fangiana HOM05D006649 ORTHO05D008754 7.2e-61 237.7 176 63.6
Oeu035544.1 Olea europaea HOM05D006649 ORTHO05D008754 7.2e-61 237.7 175 64.0
Sp5g16580 Schrenkiella parvula HOM05D006649 ORTHO05D008754 7.2e-61 237.7 179 66.5
Cc01_g09580 Coffea canephora HOM05D006649 ORTHO05D008754 9.4e-61 237.3 176 63.6
MD11G1159700 Malus domestica HOM05D006649 ORTHO05D008754 9.4e-61 237.3 176 64.2
PGR119G1752 Punica granatum HOM05D006649 ORTHO05D008754 9.4e-61 237.3 178 66.9
RcHm_v2.0_Chr5g0043851 Rosa chinensis HOM05D006649 ORTHO05D008754 9.4e-61 237.3 176 64.8
Sc21g0004770 Simmondsia chinensis HOM05D006649 ORTHO05D008754 1.2e-60 236.9 172 66.3
Thecc.09G288800 Theobroma cacao HOM05D006649 ORTHO05D008754 1.6e-60 236.5 173 64.7
AT3G44620 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 2.1e-60 236.1 179 65.4
Haze_23431 Corylus avellana HOM05D006649 ORTHO05D008754 2.1e-60 236.1 176 64.2
Prupe.6G122700 Prunus persica HOM05D006649 ORTHO05D008754 2.1e-60 236.1 176 63.6
QL01p013359 Quercus lobata HOM05D006649 ORTHO05D008754 2.1e-60 236.1 173 65.3
AUR62009801 Chenopodium quinoa HOM05D006649 ORTHO05D008754 2.7e-60 235.7 175 64.6
SGA_v2.0_scaffold147G36353 Striga asiatica HOM05D006649 ORTHO05D008754 3.6e-60 235.3 175 62.3
SalBow6G0396 Salvia bowleyana HOM05D006649 ORTHO05D008754 4.6e-60 235.0 175 62.3
vmacro03292 Vaccinium macrocarpon HOM05D006649 ORTHO05D008754 4.6e-60 235.0 173 65.9
EL10Ac7g15785 Beta vulgaris HOM05D006649 ORTHO05D008754 6.1e-60 234.6 178 64.0
AUR62039249 Chenopodium quinoa HOM05D006649 ORTHO05D008754 6.1e-60 234.6 175 64.0
Psat7g189840 Pisum sativum HOM05D006649 ORTHO05D008754 6.1e-60 234.6 175 64.0
Carub.0005s1026 Capsella rubella HOM05D006649 ORTHO05D008754 7.9e-60 234.2 174 65.5
Carub.0015s0017 Capsella rubella HOM05D006649 ORTHO05D008754 7.9e-60 234.2 174 65.5
Lsat_1_v5_gn_1_62060 Lactuca sativa HOM05D006649 ORTHO05D008754 7.9e-60 234.2 175 65.1
Manes.11G159300 Manihot esculenta HOM05D006649 ORTHO05D008754 7.9e-60 234.2 178 61.8
TPR.G15571 Trifolium pratense HOM05D006649 ORTHO05D008754 7.9e-60 234.2 175 63.4
BcaC01g02065 Brassica carinata HOM05D006649 ORTHO05D008754 1.0e-59 233.8 176 65.3
A06p21790 Brassica napus HOM05D006649 ORTHO05D008754 1.0e-59 233.8 176 65.9
C03p69000 Brassica napus HOM05D006649 ORTHO05D008754 1.0e-59 233.8 176 65.3
BolC3t19153H Brassica oleracea HOM05D006649 ORTHO05D008754 1.0e-59 233.8 176 65.3
Carub.0015s0012 Capsella rubella HOM05D006649 ORTHO05D008754 1.0e-59 233.8 174 65.5
Rhsim13G0107300 Rhododendron simsii HOM05D006649 ORTHO05D008754 1.0e-59 233.8 173 65.3
GSVIVG01031373001 Vitis vinifera HOM05D006649 ORTHO05D008754 1.0e-59 233.8 174 64.4
Nn6g35002 Nelumbo nucifera HOM05D006649 ORTHO05D008754 1.4e-59 233.4 173 64.2
PGSC0003DMG400026546 Solanum tuberosum HOM05D006649 ORTHO05D008754 1.4e-59 233.4 174 63.8
Gohir.D05G085700 Gossypium hirsutum HOM05D006649 ORTHO05D008754 1.8e-59 233.0 173 64.2
Gorai.009G087400 Gossypium raimondii HOM05D000146 ORTHO05D000178 1.8e-59 233.0 173 64.2
BraA06t25266Z Brassica rapa HOM05D006649 ORTHO05D008754 2.3e-59 232.6 177 66.1
CARHR151530 Cardamine hirsuta HOM05D006649 ORTHO05D008754 2.3e-59 232.6 176 65.3
Potri.004G186400 Populus trichocarpa HOM05D006649 ORTHO05D008754 2.3e-59 232.6 173 63.6
Actinidia24190 Actinidia chinensis HOM05D006649 ORTHO05D008754 3.0e-59 232.3 173 64.2
FAN25G2701 Fragaria x ananassa HOM05D006649 ORTHO05D008754 3.0e-59 232.3 173 64.7
CiPaw.13G139500 Carya illinoinensis HOM05D006649 ORTHO05D008754 3.9e-59 231.9 176 63.6
Atru.chr3.3344 Acer truncatum HOM05D006649 ORTHO05D008754 5.1e-59 231.5 175 64.0
Eucgr.J00458 Eucalyptus grandis HOM05D006649 ORTHO05D008754 5.1e-59 231.5 173 64.7
HanXRQChr01g0019741 Helianthus annuus HOM05D006649 ORTHO05D008754 6.7e-59 231.1 175 62.9
Os08g0557400 Oryza sativa ssp. japonica HOM05D006649 ORTHO05D008754 6.7e-59 231.1 176 63.1
HPP92_013801 Vanilla planifolia HOM05D006649 ORTHO05D008754 6.7e-59 231.1 175 62.3
CBR_g29713 Chara braunii HOM05D006649 ORTHO05D008754 8.8e-59 230.7 177 62.7
Nitab4.5_0009861g0020 Nicotiana tabacum HOM05D006649 ORTHO05D008754 8.8e-59 230.7 173 64.2
BcaB01g01150 Brassica carinata HOM05D006649 ORTHO05D008754 1.5e-58 229.9 174 65.5
Lj2A991T88 Lonicera japonica HOM05D006649 ORTHO05D008754 1.5e-58 229.9 175 63.4
Lj3g0022718 Lotus japonicus HOM05D006649 ORTHO05D008754 1.5e-58 229.9 173 63.6
Lalb_Chr19g0136681 Lupinus albus HOM05D006649 ORTHO05D008754 1.5e-58 229.9 172 65.1
Solyc11g067060.3 Solanum lycopersicum HOM05D006649 ORTHO05D008754 1.5e-58 229.9 175 62.3
Sopen11g026770 Solanum pennellii HOM05D006649 ORTHO05D008754 1.5e-58 229.9 175 62.3
TAR633G2780 Trochodendron aralioides HOM05D006649 ORTHO05D008754 1.5e-58 229.9 173 62.4
THA.LOC104810902 Tarenaya hassleriana HOM05D006649 ORTHO05D008754 2.0e-58 229.6 176 63.1
DCAR_006154 Daucus carota HOM05D006649 ORTHO05D008754 2.6e-58 229.2 173 63.6
Gohir.A05G082800 Gossypium hirsutum HOM05D006649 ORTHO05D008754 2.6e-58 229.2 173 63.0
Sabra04G0125600 Salix brachista HOM05D006649 ORTHO05D008754 4.4e-58 228.4 173 63.0
Ca_19382_v3 Cicer arietinum L. HOM05D006649 ORTHO05D008754 5.7e-58 228.0 175 62.9
Manes.04G006800 Manihot esculenta HOM05D006649 ORTHO05D008754 5.7e-58 228.0 172 62.2
unitig_8.g3286 Utricularia gibba HOM05D006649 ORTHO05D008754 7.4e-58 227.6 173 61.3
Glyma.11G187700 Glycine max HOM05D006649 ORTHO05D008754 9.7e-58 227.3 173 63.6
CsaV3_6G014840 Cucumis sativus L. HOM05D006649 ORTHO05D008754 1.7e-57 226.5 173 64.2
CANSAT54G3044 Cannabis sativa HOM05D006649 ORTHO05D008754 2.2e-57 226.1 173 61.3
Glyma.12G086800 Glycine max HOM05D006649 ORTHO05D008754 2.2e-57 226.1 176 61.4
Hma1.2p1_0695F.1_g204540 Hydrangea macrophylla HOM05D006649 ORTHO05D008754 2.2e-57 226.1 173 63.0
PSO384G2883 Papaver somniferum HOM05D006649 ORTHO05D008754 2.2e-57 226.1 172 63.4
arahy.Tifrunner.gnm1.ann1.AS0IPM Arachis hypogaea HOM05D006649 ORTHO05D008754 2.8e-57 225.7 171 63.2
arahy.Tifrunner.gnm1.ann1.WDN5HE Arachis hypogaea HOM05D006649 ORTHO05D008754 2.8e-57 225.7 171 63.2
Aa31LG4G14340 Aethionema arabicum HOM05D006649 ORTHO05D008754 6.3e-57 224.6 203 56.7
Mapoly0056s0130 Marchantia polymorpha HOM05D006649 ORTHO05D008754 6.3e-57 224.6 172 61.6
PSO339G3959 Papaver somniferum HOM05D006649 ORTHO05D008754 1.1e-56 223.8 172 63.4
Phvul.011G091000 Phaseolus vulgaris HOM05D006649 ORTHO05D008754 1.1e-56 223.8 173 61.8
COL.COLO4_19946 Corchorus olitorius HOM05D000146 ORTHO05D000178 2.4e-56 222.6 162 64.8
VMungo1127G2203 Vigna mungo HOM05D006649 ORTHO05D008754 3.1e-56 222.2 173 61.8
CSS0006150 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 1.2e-55 220.3 176 62.5
Duzib170G0763 Durio zibethinus HOM05D006649 ORTHO05D008754 5.9e-55 218.0 200 55.0
Migut.N02505 Erythranthe guttata HOM05D006649 ORTHO05D008754 5.9e-55 218.0 174 58.0
Nitab4.5_0006735g0030 Nicotiana tabacum HOM05D006649 ORTHO05D008754 5.2e-51 204.9 155 63.9
TPR.G9708 Trifolium pratense HOM05D006649 ORTHO05D008754 1.5e-50 203.4 181 56.4
CSS0022960 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 7.0e-48 194.5 176 55.7
Actinidia07225 Actinidia chinensis HOM05D006649 ORTHO05D008754 2.2e-46 189.5 177 55.4
CDE08G1146 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 2.3e-43 179.5 174 54.0
Cre14.g632767 Chlamydomonas reinhardtii HOM05D006649 ORTHO05D008754 4.4e-42 175.3 179 53.1
Zm00001eb339600 Zea mays HOM05D006649 ORTHO05D008754 5.7e-42 174.9 141 59.6
MELO3C021441.2 Cucumis melo HOM05D006649 ORTHO05D008754 6.3e-41 171.4 157 56.1
Zm00001eb382760 Zea mays HOM05D006649 ORTHO05D008754 7.7e-39 164.5 136 58.1
ClCG02G022010 Citrullus lanatus HOM05D006649 ORTHO05D008754 2.5e-37 159.5 173 50.9
Ah.15g095620 Amaranthus hybridus HOM05D006649 ORTHO05D008754 3.2e-37 159.1 114 63.2
AL5G22760 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 9.4e-37 157.5 115 67.0
PRCOL_00004711 Prasinoderma coloniale HOM05D006649 ORTHO05D008754 1.6e-36 156.8 185 45.9
AL5G22830 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 3.6e-36 155.6 115 65.2
Dinv29440 Davidia involucrata HOM05D006649 ORTHO05D008754 4.7e-36 155.2 108 65.7
Thhalv10002731m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 4.7e-36 155.2 115 65.2
FvH4_3g24360 Fragaria vesca HOM05D006649 ORTHO05D008754 1.2e-34 150.6 127 58.3
Peaxi162Scf01284g00017 Petunia axillaris HOM05D006649 ORTHO05D008754 2.6e-34 149.4 160 51.2
SEGI_31986 Sequoiadendron giganteum HOM05D006649 ORTHO05D008754 1.2e-31 140.6 119 60.5
Zm00001eb039610 Zea mays HOM05D006649 ORTHO05D008754 5.9e-31 138.3 105 66.7
Sed0010741 Sechium edule HOM05D006649 ORTHO05D008754 2.5e-29 132.9 103 65.0
Duzib168G0232 Durio zibethinus HOM05D006649 ORTHO05D008754 2.1e-28 129.8 102 62.7
COL.COLO4_00685 Corchorus olitorius HOM05D030008 ORTHO05D034598 7.5e-18 94.7 164 36.0
Thhalv10003008m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 1.6e-15 87.0 58 69.0
CBR_g19487 Chara braunii HOM05D006649 ORTHO05D023509 3.5e-15 85.9 180 30.6
Pp3c1_29030 Physcomitrium patens HOM05D006649 ORTHO05D023509 3.5e-15 85.9 184 30.4
Mapoly0054s0048 Marchantia polymorpha HOM05D006649 ORTHO05D023509 8.6e-14 81.3 179 31.3
CDE06G0522 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 1.1e-13 80.9 60 66.7


User provided reference genes

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