Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO347G0426 Selaginella moellendorffii HOM05D006109 ORTHO05D007647 3.0e-159 565.1 278 100.0
SMO111G0178 Selaginella moellendorffii HOM05D006109 ORTHO05D007647 1.2e-51 207.6 137 78.8
SMO347G0147 Selaginella moellendorffii HOM05D006109 ORTHO05D007647 1.2e-41 174.5 149 65.1
SMO347G0192 Selaginella moellendorffii HOM05D006109 ORTHO05D007647 1.1e-36 157.9 148 58.8
Mapoly0058s0077 Marchantia polymorpha HOM05D006109 ORTHO05D007647 3.8e-29 132.9 171 43.3
Pp3c24_20 Physcomitrium patens HOM05D006109 ORTHO05D007647 2.5e-28 130.2 209 40.2
Ca_06582_v3 Cicer arietinum L. HOM05D006109 ORTHO05D007647 3.6e-27 126.3 193 42.0
arahy.Tifrunner.gnm1.ann1.N0D599 Arachis hypogaea HOM05D006109 ORTHO05D007647 4.0e-26 122.9 160 43.1
Lalb_Chr10g0093951 Lupinus albus HOM05D006109 ORTHO05D007647 5.2e-26 122.5 171 42.7
AagrBONN_evm.TU.Sc2ySwM_228.925 Anthoceros agrestis HOM05D006109 ORTHO05D007647 6.8e-26 122.1 161 44.1
arahy.Tifrunner.gnm1.ann1.Z1T37B Arachis hypogaea HOM05D006109 ORTHO05D007647 1.2e-25 121.3 160 42.5
Migut.K01380 Erythranthe guttata HOM05D006109 ORTHO05D007647 2.0e-25 120.6 180 39.4
ECA238G0132 Erigeron canadensis HOM05D006109 ORTHO05D007647 2.6e-25 120.2 165 42.4
Sed0024403 Sechium edule HOM05D006109 ORTHO05D007647 4.4e-25 119.4 160 44.4
FvH4_6g50950 Fragaria vesca HOM05D006109 ORTHO05D007647 7.5e-25 118.6 160 42.5
FAN02G3346 Fragaria x ananassa HOM05D006109 ORTHO05D007647 9.8e-25 118.2 160 42.5
Glyma.19G115400 Glycine max HOM05D006109 ORTHO05D007647 9.8e-25 118.2 212 38.7
Medtr7g035310 Medicago truncatula HOM05D006109 ORTHO05D007647 1.3e-24 117.9 157 43.3
CiPaw.03G040100 Carya illinoinensis HOM05D006109 ORTHO05D007647 1.7e-24 117.5 157 43.3
RcHm_v2.0_Chr2g0172351 Rosa chinensis HOM05D006109 ORTHO05D007647 1.7e-24 117.5 160 42.5
Atru.chr6.2325 Acer truncatum HOM05D006109 ORTHO05D007647 2.2e-24 117.1 160 43.8
HanXRQChr14g0450421 Helianthus annuus HOM05D006109 ORTHO05D007647 2.2e-24 117.1 166 42.8
MD09G1030300 Malus domestica HOM05D006109 ORTHO05D007647 2.2e-24 117.1 160 43.1
Phvul.004G149800 Phaseolus vulgaris HOM05D006109 ORTHO05D007647 2.2e-24 117.1 160 43.1
Sp6g29380 Schrenkiella parvula HOM05D006109 ORTHO05D007647 2.8e-24 116.7 160 43.8
VMungo0464G1588 Vigna mungo HOM05D006109 ORTHO05D007647 2.8e-24 116.7 209 38.8
Glyma.19G061900 Glycine max HOM05D006109 ORTHO05D007647 3.7e-24 116.3 160 43.8
Lj1g0027893 Lotus japonicus HOM05D006109 ORTHO05D007647 4.9e-24 115.9 157 42.7
Cc00_g04250 Coffea canephora HOM05D006109 ORTHO05D007647 6.3e-24 115.5 182 40.1
Eucgr.I01778 Eucalyptus grandis HOM05D006109 ORTHO05D007647 6.3e-24 115.5 228 38.2
Cfa007410 Carpinus fangiana HOM05D006109 ORTHO05D007647 8.3e-24 115.2 160 41.9
MELO3C009968.2 Cucumis melo HOM05D006109 ORTHO05D007647 8.3e-24 115.2 160 43.8
Prupe.3G287100 Prunus persica HOM05D006109 ORTHO05D007647 8.3e-24 115.2 160 41.9
Potri.001G346700 Populus trichocarpa HOM05D006109 ORTHO05D007647 1.1e-23 114.8 159 41.5
Cpa.g.sc108.27 Carica papaya HOM05D006109 ORTHO05D007647 1.4e-23 114.4 157 42.0
Psat3g166600 Pisum sativum HOM05D006109 ORTHO05D007647 1.4e-23 114.4 205 39.0
Haze_14694 Corylus avellana HOM05D006109 ORTHO05D007647 1.8e-23 114.0 160 42.5
MSTRG.3294 Avicennia marina HOM05D006109 ORTHO05D007647 2.4e-23 113.6 187 40.1
ClCG10G014090 Citrullus lanatus HOM05D006109 ORTHO05D007647 2.4e-23 113.6 160 43.8
COL.COLO4_29012 Corchorus olitorius HOM05D006109 ORTHO05D007647 2.4e-23 113.6 160 41.9
EL10Ac4g09089 Beta vulgaris HOM05D006109 ORTHO05D007647 3.2e-23 113.2 193 38.3
CANSAT64G2896 Cannabis sativa HOM05D006109 ORTHO05D007647 3.2e-23 113.2 157 42.0
Thecc.04G012100 Theobroma cacao HOM05D006109 ORTHO05D007647 3.2e-23 113.2 160 41.9
arahy.Tifrunner.gnm1.ann1.RE4L3J Arachis hypogaea HOM05D006109 ORTHO05D007647 4.1e-23 112.8 160 43.1
CsaV3_3G042570 Cucumis sativus L. HOM05D006109 ORTHO05D007647 4.1e-23 112.8 160 43.1
Dinv35082 Davidia involucrata HOM05D006109 ORTHO05D007647 4.1e-23 112.8 160 41.2
Hma1.2p1_0993F.1_g245320 Hydrangea macrophylla HOM05D006109 ORTHO05D007647 4.1e-23 112.8 160 42.5
MBI16_g27082_MAGBIO Magnolia biondii HOM05D006109 ORTHO05D007647 4.1e-23 112.8 158 43.0
AT5G14660 Arabidopsis thaliana HOM05D006109 ORTHO05D007647 7.0e-23 112.1 160 42.5
Sabra16G0226300 Salix brachista HOM05D006109 ORTHO05D007647 7.0e-23 112.1 160 40.6
Carub.0006s1283 Capsella rubella HOM05D006109 ORTHO05D007647 9.2e-23 111.7 160 41.9
CDE02G3642 Ceratophyllum demersum HOM05D006109 ORTHO05D007647 9.2e-23 111.7 160 41.9
Duzib187G0986 Durio zibethinus HOM05D006109 ORTHO05D007647 9.2e-23 111.7 160 42.5
Gohir.D10G087300 Gossypium hirsutum HOM05D006109 ORTHO05D007647 9.2e-23 111.7 175 40.6
Lj7A594G50 Lonicera japonica HOM05D006109 ORTHO05D007647 9.2e-23 111.7 178 40.4
Hund06951 Selenicereus undatus HOM05D006109 ORTHO05D007647 9.2e-23 111.7 151 41.7
Sc16g0003340 Simmondsia chinensis HOM05D006109 ORTHO05D007647 9.2e-23 111.7 160 40.6
MD17G1032100 Malus domestica HOM05D006109 ORTHO05D007647 1.2e-22 111.3 160 42.5
TPR.G9075 Trifolium pratense HOM05D006109 ORTHO05D007647 1.6e-22 110.9 157 41.4
vmacro05842 Vaccinium macrocarpon HOM05D006109 ORTHO05D007647 1.6e-22 110.9 160 39.4
ATR1091G073 Amborella trichopoda HOM05D006109 ORTHO05D007647 2.0e-22 110.5 160 39.4
Ciclev10016231m.g Citrus clementina HOM05D006109 ORTHO05D007647 2.0e-22 110.5 160 40.0
Gorai.011G095500 Gossypium raimondii HOM05D006109 ORTHO05D007647 2.0e-22 110.5 175 40.6
arahy.Tifrunner.gnm1.ann1.NAGP4P Arachis hypogaea HOM05D006109 ORTHO05D007647 2.7e-22 110.2 173 39.3
TAR629G1761 Trochodendron aralioides HOM05D006109 ORTHO05D007647 2.7e-22 110.2 160 41.2
GSVIVG01032450001 Vitis vinifera HOM05D006109 ORTHO05D007647 2.7e-22 110.2 160 40.0
FAN14G3710 Fragaria x ananassa HOM05D006109 ORTHO05D007647 3.5e-22 109.8 190 38.4
Manes.17G113300 Manihot esculenta HOM05D006109 ORTHO05D007647 3.5e-22 109.8 157 40.1
Nn4g22741 Nelumbo nucifera HOM05D006109 ORTHO05D007647 3.5e-22 109.8 153 43.1
Rhsim10G0019600 Rhododendron simsii HOM05D006109 ORTHO05D007647 4.5e-22 109.4 163 40.5
Aqoxy3G01052 Aquilegia oxysepala HOM05D006109 ORTHO05D007647 5.9e-22 109.0 157 41.4
C09p62480 Brassica napus HOM05D006109 ORTHO05D007647 5.9e-22 109.0 157 41.4
BolC9t59085H Brassica oleracea HOM05D006109 ORTHO05D007647 5.9e-22 109.0 157 41.4
AUR62032756 Chenopodium quinoa HOM05D006109 ORTHO05D007647 5.9e-22 109.0 152 42.1
DCAR_011234 Daucus carota HOM05D006109 ORTHO05D007647 5.9e-22 109.0 157 40.8
Nitab4.5_0008215g0030 Nicotiana tabacum HOM05D006109 ORTHO05D007647 5.9e-22 109.0 158 40.5
THA.LOC104822396 Tarenaya hassleriana HOM05D006109 ORTHO05D007647 5.9e-22 109.0 160 40.6
BraA10t44464Z Brassica rapa HOM05D006109 ORTHO05D007647 7.8e-22 108.6 157 41.4
FAN09G4447 Fragaria x ananassa HOM05D006109 ORTHO05D007647 7.8e-22 108.6 216 38.0
QL02p075892 Quercus lobata HOM05D006109 ORTHO05D007647 7.8e-22 108.6 157 41.4
unitig_748.g8596 Utricularia gibba HOM05D006109 ORTHO05D007647 7.8e-22 108.6 156 39.7
Actinidia06012 Actinidia chinensis HOM05D000487 ORTHO05D007647 1.0e-21 108.2 160 41.2
Thhalv10014367m.g Eutrema salsugineum HOM05D006109 ORTHO05D007647 1.3e-21 107.8 158 41.1
Gohir.A10G103100 Gossypium hirsutum HOM05D006109 ORTHO05D007647 1.3e-21 107.8 173 39.3
AL6G25430 Arabidopsis lyrata HOM05D006109 ORTHO05D007647 1.7e-21 107.5 157 41.4
Nitab4.5_0002739g0120 Nicotiana tabacum HOM05D006109 ORTHO05D007647 1.7e-21 107.5 158 40.5
SalBow5G0229 Salvia bowleyana HOM05D006109 ORTHO05D007647 1.7e-21 107.5 157 39.5
SalBow7G1007 Salvia bowleyana HOM05D006109 ORTHO05D007647 1.7e-21 107.5 157 39.5
A10p24010 Brassica napus HOM05D006109 ORTHO05D007647 2.3e-21 107.1 157 40.8
CAN.G206.14 Capsicum annuum HOM05D006109 ORTHO05D007647 2.3e-21 107.1 158 39.9
CBR_g10865 Chara braunii HOM05D006109 ORTHO05D007647 2.3e-21 107.1 165 37.6
Zm00001eb359100 Zea mays HOM05D006109 ORTHO05D007647 2.3e-21 107.1 178 38.2
AUR62001047 Chenopodium quinoa HOM05D006109 ORTHO05D007647 2.9e-21 106.7 152 40.8
PGR142G0249 Punica granatum HOM05D006109 ORTHO05D007647 2.9e-21 106.7 181 39.2
HPP92_016034 Vanilla planifolia HOM05D006109 ORTHO05D007647 2.9e-21 106.7 155 41.3
CARHR198660 Cardamine hirsuta HOM05D006109 ORTHO05D007647 3.9e-21 106.3 160 40.6
CBR_g11073 Chara braunii HOM05D006109 ORTHO05D007647 3.9e-21 106.3 223 33.6
Os01g0636600 Oryza sativa ssp. japonica HOM05D006109 ORTHO05D007647 5.0e-21 105.9 157 38.9
Os01g0637600 Oryza sativa ssp. japonica HOM05D006109 ORTHO05D007647 5.0e-21 105.9 157 38.9
CSS0036441 Camellia sinensis var. sinensis HOM05D006109 ORTHO05D007647 1.1e-20 104.8 153 41.2
HPP92_016020 Vanilla planifolia HOM05D006109 ORTHO05D007647 1.5e-20 104.4 156 41.0
CSS0045399 Camellia sinensis var. sinensis HOM05D006109 ORTHO05D007647 1.9e-20 104.0 182 37.9
SalBow5G1807 Salvia bowleyana HOM05D006109 ORTHO05D007647 1.9e-20 104.0 157 38.2
Sopen02g031440 Solanum pennellii HOM05D006109 ORTHO05D007647 1.9e-20 104.0 158 39.2
PGSC0003DMG400000518 Solanum tuberosum HOM05D006109 ORTHO05D007647 2.5e-20 103.6 158 39.2
Solyc02g086680.4 Solanum lycopersicum HOM05D006109 ORTHO05D007647 3.3e-20 103.2 158 39.2
PRCOL_00005209 Prasinoderma coloniale HOM05D006109 ORTHO05D007647 7.3e-20 102.1 148 40.5
arahy.Tifrunner.gnm1.ann1.9SWD85 Arachis hypogaea HOM05D006109 ORTHO05D007647 9.5e-20 101.7 83 61.4
Aa31LG11G14800 Aethionema arabicum HOM05D006109 ORTHO05D007647 2.1e-19 100.5 160 38.8
SMO347G0494 Selaginella moellendorffii HOM05D006109 ORTHO05D376131 4.7e-19 99.4 86 59.3
Lsat_1_v5_gn_2_91661 Lactuca sativa HOM05D000487 ORTHO05D007647 1.4e-18 97.8 80 58.8
SGA_v2.0_scaffold30G12428 Striga asiatica HOM05D006109 ORTHO05D007647 3.1e-18 96.7 190 36.3
Cre01.g039750 Chlamydomonas reinhardtii HOM05D006109 ORTHO05D007647 6.4e-16 89.0 146 35.6
MCO01G286 Micromonas commoda HOM05D006109 ORTHO05D007647 1.2e-14 84.7 149 36.2
arahy.Tifrunner.gnm1.ann1.MW1879 Arachis hypogaea HOM05D006109 ORTHO05D007647 2.5e-12 77.0 132 37.1
Peaxi162Scf00129g01227 Petunia axillaris HOM05D006109 ORTHO05D007647 4.3e-12 76.3 113 38.9
SGA_v2.0_scaffold30G12431 Striga asiatica HOM05D006109 ORTHO05D007647 2.1e-11 73.9 69 53.6
SalBow5G4602 Salvia bowleyana HOM05D006109 ORTHO05D007647 2.8e-11 73.6 110 38.2
Sabra16G0225600 Salix brachista HOM05D006109 ORTHO05D007647 3.6e-11 73.2 110 38.2
AUR62004904 Chenopodium quinoa HOM05D006109 ORTHO05D007647 8.0e-11 72.0 107 39.3
SHI22178 Sapria himalayana HOM05D006109 ORTHO05D007647 1.5e-09 67.8 157 30.6
HPP92_016014 Vanilla planifolia HOM05D006109 ORTHO05D007647 2.0e-09 67.4 108 37.0
Oeu043040.1 Olea europaea HOM05D006109 ORTHO05D007647 2.6e-09 67.0 95 41.1
HPP92_016006 Vanilla planifolia HOM05D006109 ORTHO05D007647 1.3e-08 64.7 78 47.4
Cre01.g039650 Chlamydomonas reinhardtii HOM05D006109 ORTHO05D007647 4.6e-06 56.2 101 34.7


User provided reference genes

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