Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO347G0406 Selaginella moellendorffii HOM05D004913 ORTHO05D006150 1.1e-119 433.7 301 100.0
Mapoly0010s0154 Marchantia polymorpha HOM05D004913 ORTHO05D006150 1.1e-24 118.2 158 50.0
CiPaw.02G117800 Carya illinoinensis HOM05D004913 ORTHO05D006150 1.5e-23 114.4 172 43.6
CSS0025455 Camellia sinensis var. sinensis HOM05D004913 ORTHO05D006150 4.5e-23 112.8 165 45.5
TAR636G2191 Trochodendron aralioides HOM05D004913 ORTHO05D006150 7.6e-23 112.1 159 45.9
CsaV3_3G012680 Cucumis sativus L. HOM05D004913 ORTHO05D006150 9.9e-23 111.7 173 44.5
GSVIVG01018096001 Vitis vinifera HOM05D004913 ORTHO05D006150 1.3e-22 111.3 158 44.3
ATR0665G449 Amborella trichopoda HOM05D004913 ORTHO05D006150 1.7e-22 110.9 143 46.9
THA.LOC104815979 Tarenaya hassleriana HOM05D004913 ORTHO05D006150 1.7e-22 110.9 158 46.2
MSTRG.21888 Avicennia marina HOM05D004913 ORTHO05D006150 2.2e-22 110.5 148 45.3
Gorai.006G070100 Gossypium raimondii HOM05D004913 ORTHO05D006150 2.9e-22 110.2 168 43.5
Cpa.g.sc58.23 Carica papaya HOM05D004913 ORTHO05D006150 3.8e-22 109.8 159 45.3
CSS0009777 Camellia sinensis var. sinensis HOM05D004913 ORTHO05D003182 4.9e-22 109.4 148 45.3
MD13G1204100 Malus domestica HOM05D004913 ORTHO05D006150 4.9e-22 109.4 151 46.4
RcHm_v2.0_Chr5g0043971 Rosa chinensis HOM05D004913 ORTHO05D006150 4.9e-22 109.4 151 43.7
Lj3A719T118 Lonicera japonica HOM05D004913 ORTHO05D006150 8.4e-22 108.6 148 47.3
MBI11_g38514_MAGBIO Magnolia biondii HOM05D004913 ORTHO05D006150 8.4e-22 108.6 174 42.5
CANSAT78G1520 Cannabis sativa HOM05D004913 ORTHO05D006150 1.1e-21 108.2 173 41.6
CAN.G626.13 Capsicum annuum HOM05D004913 ORTHO05D006150 1.9e-21 107.5 162 43.2
Nn1g02556 Nelumbo nucifera HOM05D004913 ORTHO05D006150 1.9e-21 107.5 164 42.7
MD16G1206200 Malus domestica HOM05D004913 ORTHO05D006150 2.4e-21 107.1 151 45.0
TWI73G0814 Tripterygium wilfordii HOM05D004913 ORTHO05D006150 2.4e-21 107.1 173 42.8
Prupe.1G027200 Prunus persica HOM05D004913 ORTHO05D006150 3.2e-21 106.7 158 43.7
Sed0018032 Sechium edule HOM05D004913 ORTHO05D003182 3.2e-21 106.7 168 42.9
TWI09G0491 Tripterygium wilfordii HOM05D004913 ORTHO05D006150 4.2e-21 106.3 176 40.3
AagrBONN_evm.TU.Sc2ySwM_362.2200 Anthoceros agrestis HOM05D004913 ORTHO05D006150 5.4e-21 105.9 171 44.4
Gohir.A09G057300 Gossypium hirsutum HOM05D004913 ORTHO05D006150 5.4e-21 105.9 169 43.2
Solyc09g083270.4 Solanum lycopersicum HOM05D004913 ORTHO05D006150 5.4e-21 105.9 170 40.6
Sopen09g032190 Solanum pennellii HOM05D004913 ORTHO05D006150 5.4e-21 105.9 170 40.6
PGSC0003DMG400006092 Solanum tuberosum HOM05D004913 ORTHO05D006150 5.4e-21 105.9 170 40.6
THA.LOC104826068 Tarenaya hassleriana HOM05D004913 ORTHO05D006150 5.4e-21 105.9 159 43.4
EL10Ac4g07493 Beta vulgaris HOM05D004913 ORTHO05D006150 7.1e-21 105.5 148 45.3
Eucgr.H03172 Eucalyptus grandis HOM05D004913 ORTHO05D006150 7.1e-21 105.5 172 41.3
Gohir.D10G152000 Gossypium hirsutum HOM05D004913 ORTHO05D006150 7.1e-21 105.5 148 45.9
Gorai.011G170500 Gossypium raimondii HOM05D004913 ORTHO05D006150 7.1e-21 105.5 148 45.9
SGA_v2.0_scaffold101G29779 Striga asiatica HOM05D004913 ORTHO05D006150 7.1e-21 105.5 145 44.1
vmacro15402 Vaccinium macrocarpon HOM05D004913 ORTHO05D006150 9.3e-21 105.1 145 44.8
CDE04G3353 Ceratophyllum demersum HOM05D004913 ORTHO05D006150 1.6e-20 104.4 171 39.8
PSO210G5612 Papaver somniferum HOM05D004913 ORTHO05D006150 1.6e-20 104.4 177 40.1
Potri.008G160800 Populus trichocarpa HOM05D004913 ORTHO05D006150 1.6e-20 104.4 166 42.8
Cc03_g04640 Coffea canephora HOM05D004913 ORTHO05D006150 2.1e-20 104.0 145 42.1
Gohir.A10G114500 Gossypium hirsutum HOM05D004913 ORTHO05D006150 2.1e-20 104.0 148 45.3
Oeu032612.1 Olea europaea HOM05D004913 ORTHO05D006150 2.1e-20 104.0 167 41.3
Pp3c2_37690 Physcomitrium patens HOM05D004913 ORTHO05D006150 2.1e-20 104.0 161 43.5
Thecc.04G244000 Theobroma cacao HOM05D004913 ORTHO05D006150 2.1e-20 104.0 145 44.8
Actinidia05471 Actinidia chinensis HOM05D004913 ORTHO05D006150 2.7e-20 103.6 165 43.0
Aa31LG5G3520 Aethionema arabicum HOM05D004913 ORTHO05D006150 2.7e-20 103.6 167 41.9
Ciclev10005381m.g Citrus clementina HOM05D004913 ORTHO05D006150 3.5e-20 103.2 145 45.5
Duzib052G0554 Durio zibethinus HOM05D004913 ORTHO05D006150 3.5e-20 103.2 145 44.8
Manes.03G170000 Manihot esculenta HOM05D004913 ORTHO05D006150 4.6e-20 102.8 145 44.1
QL06p015098 Quercus lobata HOM05D004913 ORTHO05D006150 4.6e-20 102.8 178 40.4
Manes.15G035800 Manihot esculenta HOM05D004913 ORTHO05D006150 6.0e-20 102.4 145 45.5
Sed0027984 Sechium edule HOM05D004913 ORTHO05D006150 6.0e-20 102.4 175 43.4
CDE07G0872 Ceratophyllum demersum HOM05D004913 ORTHO05D006150 1.0e-19 101.7 171 39.8
Duzib151G0562 Durio zibethinus HOM05D004913 ORTHO05D006150 1.0e-19 101.7 145 42.8
FvH4_3g24470 Fragaria vesca HOM05D004913 ORTHO05D006150 1.0e-19 101.7 151 43.0
Haze_11271 Corylus avellana HOM05D004913 ORTHO05D006150 1.3e-19 101.3 176 41.5
PGR004G2231 Punica granatum HOM05D004913 ORTHO05D006150 1.3e-19 101.3 145 43.4
Migut.N00232 Erythranthe guttata HOM05D004913 ORTHO05D006150 2.3e-19 100.5 148 42.6
Nitab4.5_0000525g0090 Nicotiana tabacum HOM05D004913 ORTHO05D006150 2.3e-19 100.5 142 42.3
Nitab4.5_0004203g0050 Nicotiana tabacum HOM05D004913 ORTHO05D006150 2.3e-19 100.5 142 42.3
BcaC06g31682 Brassica carinata HOM05D004913 ORTHO05D006150 3.0e-19 100.1 159 41.5
Thhalv10003245m.g Eutrema salsugineum HOM05D004913 ORTHO05D006150 3.0e-19 100.1 170 40.6
Sp2g08510 Schrenkiella parvula HOM05D004913 ORTHO05D006150 3.0e-19 100.1 159 41.5
CARHR179900 Cardamine hirsuta HOM05D004913 ORTHO05D006150 3.9e-19 99.8 159 41.5
Peaxi162Scf01416g00120 Petunia axillaris HOM05D004913 ORTHO05D006150 5.1e-19 99.4 169 37.9
AL1G13830 Arabidopsis lyrata HOM05D004913 ORTHO05D006150 6.7e-19 99.0 160 43.8
AL37U10050 Arabidopsis lyrata HOM05D004913 ORTHO05D006150 6.7e-19 99.0 159 40.9
Carub.0001s0342 Capsella rubella HOM05D004913 ORTHO05D006150 6.7e-19 99.0 159 42.8
AT5G43720 Arabidopsis thaliana HOM05D004913 ORTHO05D006150 1.1e-18 98.2 159 40.9
ECA233G3913 Erigeron canadensis HOM05D004913 ORTHO05D006150 1.1e-18 98.2 145 42.1
BolC7t43157H Brassica oleracea HOM05D004913 ORTHO05D006150 1.5e-18 97.8 159 39.6
C07p26280 Brassica napus HOM05D004913 ORTHO05D006150 1.9e-18 97.4 159 39.6
Gohir.D09G056500 Gossypium hirsutum HOM05D004913 ORTHO05D006150 1.9e-18 97.4 131 45.0
Lsat_1_v5_gn_5_67500 Lactuca sativa HOM05D004913 ORTHO05D006150 1.9e-18 97.4 177 40.1
Migut.G00417 Erythranthe guttata HOM05D004913 ORTHO05D006150 2.5e-18 97.1 163 41.1
A06p47740 Brassica napus HOM05D004913 ORTHO05D006150 3.3e-18 96.7 159 40.3
CDE07G2030 Ceratophyllum demersum HOM05D004913 ORTHO05D006150 3.3e-18 96.7 170 38.8
SEGI_31281 Sequoiadendron giganteum HOM05D004913 ORTHO05D006150 3.3e-18 96.7 133 42.9
BraA06t27642Z Brassica rapa HOM05D004913 ORTHO05D006150 4.3e-18 96.3 159 40.3
Carub.0008s0491 Capsella rubella HOM05D004913 ORTHO05D006150 4.3e-18 96.3 159 38.4
Sabra08G0122700 Salix brachista HOM05D004913 ORTHO05D006150 4.3e-18 96.3 166 41.6
Lalb_Chr06g0168981 Lupinus albus HOM05D004913 ORTHO05D006150 5.6e-18 95.9 149 40.9
AT1G04230 Arabidopsis thaliana HOM05D004913 ORTHO05D006150 7.4e-18 95.5 160 43.1
Os03g0797700 Oryza sativa ssp. japonica HOM05D004913 ORTHO05D006150 7.4e-18 95.5 145 42.1
PSO832G0934 Papaver somniferum HOM05D004913 ORTHO05D006150 7.4e-18 95.5 189 37.6
Dinv44614 Davidia involucrata HOM05D004913 ORTHO05D006150 9.6e-18 95.1 175 40.6
Potri.010G078500 Populus trichocarpa HOM05D004913 ORTHO05D006150 9.6e-18 95.1 182 39.6
HPP92_014140 Vanilla planifolia HOM05D004913 ORTHO05D006150 9.6e-18 95.1 167 38.9
BcaC03g16589 Brassica carinata HOM05D004913 ORTHO05D006150 1.3e-17 94.7 159 40.3
C02p44080 Brassica napus HOM05D004913 ORTHO05D006150 1.3e-17 94.7 159 40.3
MELO3C006479.2 Cucumis melo HOM05D004913 ORTHO05D006150 1.3e-17 94.7 209 36.8
CDE06G2453 Ceratophyllum demersum HOM05D004913 ORTHO05D006150 1.6e-17 94.4 155 37.4
A02p27910 Brassica napus HOM05D004913 ORTHO05D006150 2.1e-17 94.0 161 41.0
BraA02t07829Z Brassica rapa HOM05D004913 ORTHO05D006150 2.1e-17 94.0 161 41.0
CBR_g525 Chara braunii HOM05D004913 ORTHO05D006150 2.1e-17 94.0 128 46.1
BolC2t10451H Brassica oleracea HOM05D004913 ORTHO05D006150 2.8e-17 93.6 159 39.6
CARHR003560 Cardamine hirsuta HOM05D004913 ORTHO05D006150 2.8e-17 93.6 160 40.6
Ca_09877_v3 Cicer arietinum L. HOM05D004913 ORTHO05D006150 4.8e-17 92.8 170 38.8
Medtr1g076290 Medicago truncatula HOM05D004913 ORTHO05D006150 4.8e-17 92.8 175 40.6
DCAR_030710 Daucus carota HOM05D004913 ORTHO05D006150 1.1e-16 91.7 165 39.4
SalBow3G1711 Salvia bowleyana HOM05D004913 ORTHO05D006150 1.8e-16 90.9 177 34.5
Phvul.003G138434 Phaseolus vulgaris HOM05D004913 ORTHO05D006150 3.1e-16 90.1 159 40.3
FAN11G1852 Fragaria x ananassa HOM05D004913 ORTHO05D006150 4.0e-16 89.7 151 39.1
PSO238G0009 Papaver somniferum HOM05D004913 ORTHO05D006150 4.0e-16 89.7 163 39.9
arahy.Tifrunner.gnm1.ann1.9S1KBE Arachis hypogaea HOM05D004913 ORTHO05D006150 6.9e-16 89.0 149 40.9
AUR62040390 Chenopodium quinoa HOM05D004913 ORTHO05D006150 6.9e-16 89.0 127 44.1
arahy.Tifrunner.gnm1.ann1.8JLR9N Arachis hypogaea HOM05D004913 ORTHO05D006150 9.0e-16 88.6 149 40.9
FAN16G1149 Fragaria x ananassa HOM05D004913 ORTHO05D006150 1.2e-15 88.2 151 38.4
Glyma.10G179800 Glycine max HOM05D004913 ORTHO05D006150 1.5e-15 87.8 169 37.9
HanXRQChr12g0381181 Helianthus annuus HOM05D004913 ORTHO05D006150 1.5e-15 87.8 145 40.7
Lj5g0012164 Lotus japonicus HOM05D004913 ORTHO05D006150 1.5e-15 87.8 168 40.5
Psat6g114920 Pisum sativum HOM05D004913 ORTHO05D006150 1.5e-15 87.8 168 38.7
VMungo0720G1087 Vigna mungo HOM05D004913 ORTHO05D006150 1.5e-15 87.8 159 39.6
AL8G16560 Arabidopsis lyrata HOM05D004913 ORTHO05D006150 2.0e-15 87.4 145 40.0
PSO210G2862 Papaver somniferum HOM05D004913 ORTHO05D006150 2.0e-15 87.4 163 39.3
unitig_0.g131 Utricularia gibba HOM05D004913 ORTHO05D006150 2.0e-15 87.4 148 37.8
Sc13g0004930 Simmondsia chinensis HOM05D004913 ORTHO05D006150 2.6e-15 87.0 127 41.7
Zm00001eb212900 Zea mays HOM05D004913 ORTHO05D006150 2.6e-15 87.0 145 40.7
Aqoxy2G03527 Aquilegia oxysepala HOM05D004913 ORTHO05D006150 7.6e-15 85.5 123 44.7
AUR62041210 Chenopodium quinoa HOM05D004913 ORTHO05D006150 7.6e-15 85.5 145 40.7
Lalb_Chr21g0311951 Lupinus albus HOM05D004913 ORTHO05D006150 1.3e-14 84.7 149 38.9
Rhsim02G0032600 Rhododendron simsii HOM05D004913 ORTHO05D006150 1.3e-14 84.7 142 38.0
FAN25G1200 Fragaria x ananassa HOM05D004913 ORTHO05D006150 2.2e-14 84.0 151 38.4
FAN25G2316 Fragaria x ananassa HOM05D004913 ORTHO05D006150 2.9e-14 83.6 151 37.7
SMO358G0388 Selaginella moellendorffii HOM05D004913 ORTHO05D006150 4.9e-14 82.8 166 38.6
Glyma.20G210600 Glycine max HOM05D004913 ORTHO05D006150 8.4e-14 82.0 168 38.1
FAN21G0973 Fragaria x ananassa HOM05D004913 ORTHO05D006150 1.6e-12 77.8 151 36.4
BcaC06g34634 Brassica carinata HOM05D004913 ORTHO05D006150 1.9e-10 70.9 128 37.5
SHI00581 Sapria himalayana HOM05D004913 ORTHO05D006150 3.1e-08 63.5 121 38.0
Hund17874 Selenicereus undatus HOM05D004913 ORTHO05D006150 1.2e-07 61.6 151 32.5
COL.COLO4_15768 Corchorus olitorius HOM05D000979 ORTHO05D003182 1.5e-07 61.2 109 38.5
MCO11G351 Micromonas commoda HOM05D004913 ORTHO05D006150 4.5e-07 59.7 131 37.4
ClCG05G004680 Citrullus lanatus HOM05D000979 ORTHO05D003182 1.3e-06 58.2 121 38.8


User provided reference genes

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