Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO340G0278 Selaginella moellendorffii HOM05D006533 ORTHO05D008625 3.1e-218 761.5 393 100.0
Mapoly0015s0191 Marchantia polymorpha HOM05D006533 ORTHO05D008625 3.3e-111 406.0 458 51.1
Pp3c15_5730 Physcomitrium patens HOM05D006533 ORTHO05D008625 1.1e-98 364.4 425 48.7
ATR0829G094 Amborella trichopoda HOM05D006533 ORTHO05D008625 4.2e-98 362.5 421 47.3
AUR62028174 Chenopodium quinoa HOM05D006533 ORTHO05D008625 1.8e-96 357.1 417 47.7
AUR62002060 Chenopodium quinoa HOM05D006533 ORTHO05D008625 4.4e-95 352.4 416 46.9
Actinidia34305 Actinidia chinensis HOM05D006533 ORTHO05D008625 6.3e-94 348.6 396 47.5
FvH4_7g33920 Fragaria vesca HOM05D006533 ORTHO05D008625 1.1e-93 347.8 404 48.3
FAN03G0602 Fragaria x ananassa HOM05D006533 ORTHO05D008625 1.1e-93 347.8 399 48.1
HPP92_005443 Vanilla planifolia HOM05D006533 ORTHO05D008625 1.4e-93 347.4 398 47.7
QL09p024067 Quercus lobata HOM05D006533 ORTHO05D008625 1.8e-93 347.1 410 47.1
RcHm_v2.0_Chr1g0384131 Rosa chinensis HOM05D006533 ORTHO05D008625 9.1e-93 344.7 418 47.4
Thecc.01G135900 Theobroma cacao HOM05D006533 ORTHO05D008625 1.2e-92 344.4 401 46.9
Cc02_g00290 Coffea canephora HOM05D006533 ORTHO05D008625 2.0e-92 343.6 409 45.5
FAN10G3989 Fragaria x ananassa HOM05D006533 ORTHO05D008625 3.5e-92 342.8 402 47.5
GSVIVG01024411001 Vitis vinifera HOM05D006533 ORTHO05D008625 3.5e-92 342.8 415 45.8
Ca_24442_v3 Cicer arietinum L. HOM05D006533 ORTHO05D008625 1.0e-91 341.3 392 46.7
ECA232G2080 Erigeron canadensis HOM05D006533 ORTHO05D008625 8.5e-91 338.2 398 46.0
Medtr5g007700 Medicago truncatula HOM05D006533 ORTHO05D008625 8.5e-91 338.2 395 46.8
Glyma.11G011100 Glycine max HOM05D006533 ORTHO05D008625 1.1e-90 337.8 398 44.7
Lalb_Chr09g0320221 Lupinus albus HOM05D006533 ORTHO05D008625 1.5e-90 337.4 396 45.5
PSO063G2320 Papaver somniferum HOM05D006533 ORTHO05D008625 1.5e-90 337.4 399 46.4
Ciclev10020455m.g Citrus clementina HOM05D006533 ORTHO05D008625 1.9e-90 337.0 403 46.2
Oeu060384.1 Olea europaea HOM05D006533 ORTHO05D008625 1.9e-90 337.0 409 46.9
Potri.013G082000 Populus trichocarpa HOM05D006533 ORTHO05D008625 5.5e-90 335.5 403 46.2
Atru.chr1.2781 Acer truncatum HOM05D006533 ORTHO05D008625 7.2e-90 335.1 402 46.0
CANSAT56G1022 Cannabis sativa HOM05D006533 ORTHO05D008625 7.2e-90 335.1 414 45.2
Glyma.01G228300 Glycine max HOM05D006533 ORTHO05D008625 7.2e-90 335.1 392 46.2
PGR142G1840 Punica granatum HOM05D006533 ORTHO05D008625 7.2e-90 335.1 398 46.5
CANSAT56G3916 Cannabis sativa HOM05D006533 ORTHO05D008625 9.4e-90 334.7 414 45.2
EL10Ac3g05080 Beta vulgaris HOM05D006533 ORTHO05D008625 1.2e-89 334.3 435 43.9
arahy.Tifrunner.gnm1.ann1.NII7HE Arachis hypogaea HOM05D006533 ORTHO05D008625 2.1e-89 333.6 391 46.0
Gohir.A09G004900 Gossypium hirsutum HOM05D006533 ORTHO05D008625 2.1e-89 333.6 404 46.3
Solyc02g094260.1 Solanum lycopersicum HOM05D006533 ORTHO05D008625 2.1e-89 333.6 395 46.3
Aqoxy3G02101 Aquilegia oxysepala HOM05D006533 ORTHO05D008625 2.7e-89 333.2 418 44.7
Sabra13G0070900 Salix brachista HOM05D006533 ORTHO05D008625 2.7e-89 333.2 404 44.8
MSTRG.8576 Avicennia marina HOM05D006533 ORTHO05D008625 3.6e-89 332.8 411 46.7
Gohir.D09G004200 Gossypium hirsutum HOM05D006533 ORTHO05D008625 3.6e-89 332.8 404 45.8
Migut.F00098 Erythranthe guttata HOM05D006533 ORTHO05D008625 6.1e-89 332.0 397 46.1
Psat2g188880 Pisum sativum HOM05D006533 ORTHO05D008625 6.1e-89 332.0 392 46.4
Gorai.006G005800 Gossypium raimondii HOM05D006533 ORTHO05D008625 8.0e-89 331.6 404 45.5
Lj6g0021866 Lotus japonicus HOM05D006533 ORTHO05D008625 8.0e-89 331.6 392 45.9
Sopen02g038900 Solanum pennellii HOM05D006533 ORTHO05D008625 1.0e-88 331.3 395 45.3
CiPaw.06G033000 Carya illinoinensis HOM05D006533 ORTHO05D008625 1.4e-88 330.9 409 44.3
PGSC0003DMG400020249 Solanum tuberosum HOM05D006533 ORTHO05D008625 1.8e-88 330.5 394 45.2
Phvul.002G039600 Phaseolus vulgaris HOM05D006533 ORTHO05D008625 1.5e-87 327.4 392 44.9
TAR374G0999 Trochodendron aralioides HOM05D006533 ORTHO05D008625 1.5e-87 327.4 412 47.1
SGA_v2.0_scaffold18G08508 Striga asiatica HOM05D006533 ORTHO05D008625 2.0e-87 327.0 407 44.5
Prupe.2G325700 Prunus persica HOM05D006533 ORTHO05D008625 4.4e-87 325.9 414 43.5
Sc06g0002540 Simmondsia chinensis HOM05D006533 ORTHO05D008625 4.4e-87 325.9 399 45.4
Sed0002742 Sechium edule HOM05D006533 ORTHO05D008625 5.7e-87 325.5 402 43.0
Os06g0114600 Oryza sativa ssp. japonica HOM05D006533 ORTHO05D008625 7.5e-87 325.1 355 45.4
Lj3A887G72 Lonicera japonica HOM05D006533 ORTHO05D008625 1.7e-86 323.9 387 43.9
unitig_0.g2430 Utricularia gibba HOM05D006533 ORTHO05D008625 2.2e-86 323.6 388 43.6
Eucgr.K00088 Eucalyptus grandis HOM05D006533 ORTHO05D008625 2.8e-86 323.2 402 44.5
MD07G1308500 Malus domestica HOM05D006533 ORTHO05D008625 2.8e-86 323.2 410 44.4
Aa31LG11G12640 Aethionema arabicum HOM05D006533 ORTHO05D008625 3.7e-86 322.8 401 43.9
THA.LOC104820882 Tarenaya hassleriana HOM05D006533 ORTHO05D008625 3.7e-86 322.8 388 44.3
arahy.Tifrunner.gnm1.ann1.YJZS8S Arachis hypogaea HOM05D006533 ORTHO05D008625 6.3e-86 322.0 420 43.8
CsaV3_3G015700 Cucumis sativus L. HOM05D006533 ORTHO05D008625 6.3e-86 322.0 399 43.9
Ah.04g156530 Amaranthus hybridus HOM05D006533 ORTHO05D008625 8.2e-86 321.6 380 45.8
Lsat_1_v5_gn_9_47461 Lactuca sativa HOM05D006533 ORTHO05D008625 8.2e-86 321.6 384 43.8
ClCG05G007010 Citrullus lanatus HOM05D006533 ORTHO05D008625 4.5e-84 315.8 397 42.3
HanXRQChr05g0141721 Helianthus annuus HOM05D006533 ORTHO05D008625 1.7e-83 313.9 395 44.1
PSO782G0079 Papaver somniferum HOM05D006533 ORTHO05D008625 1.1e-82 311.2 376 47.3
vmacro06509 Vaccinium macrocarpon HOM05D006533 ORTHO05D008625 1.9e-82 310.5 397 45.1
MBI04_g36026_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 2.5e-82 310.1 398 45.2
CARHR196200 Cardamine hirsuta HOM05D006533 ORTHO05D008625 3.2e-82 309.7 400 42.5
AL6G27960 Arabidopsis lyrata HOM05D006533 ORTHO05D008625 9.4e-82 308.1 400 42.8
VMungo1215G1087 Vigna mungo HOM05D006533 ORTHO05D008625 3.6e-81 306.2 373 45.0
Zm00001eb268960 Zea mays HOM05D006533 ORTHO05D008625 3.0e-80 303.1 321 47.4
Nn1g01934 Nelumbo nucifera HOM05D006533 ORTHO05D008625 4.0e-80 302.8 415 44.6
Cpa.g.sc39.72 Carica papaya HOM05D006533 ORTHO05D008625 2.6e-79 300.1 368 44.8
Hma1.2p1_3802F.1_g337635 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 4.4e-79 299.3 337 45.4
Nitab4.5_0001510g0030 Nicotiana tabacum HOM05D006533 ORTHO05D008625 1.3e-78 297.7 436 41.3
Sabra06G0125800 Salix brachista HOM05D006533 ORTHO05D008625 2.2e-78 297.0 404 43.1
CSS0012834 Camellia sinensis var. sinensis HOM05D006533 ORTHO05D008625 6.3e-78 295.4 402 43.5
CDE11G1068 Ceratophyllum demersum HOM05D006533 ORTHO05D004827 1.2e-76 291.2 374 46.3
Medtr5g061700 Medicago truncatula HOM05D006533 ORTHO05D008625 1.2e-76 291.2 399 41.9
Duzib264G0907 Durio zibethinus HOM05D006533 ORTHO05D008625 5.9e-76 288.9 403 44.4
Peaxi162Scf00133g00721 Petunia axillaris HOM05D006533 ORTHO05D008625 7.7e-76 288.5 396 43.2
Cfa006012 Carpinus fangiana HOM05D006533 ORTHO05D008625 1.7e-75 287.3 409 42.5
COL.COLO4_35796 Corchorus olitorius HOM05D006533 ORTHO05D008625 1.7e-75 287.3 399 44.1
Hund09790 Selenicereus undatus HOM05D006533 ORTHO05D008625 5.0e-75 285.8 421 41.6
CAN.G473.117 Capsicum annuum HOM05D006533 ORTHO05D008625 1.9e-74 283.9 347 45.5
Dinv17259 Davidia involucrata HOM05D006533 ORTHO05D008625 7.2e-74 282.0 310 46.1
Manes.09G124800 Manihot esculenta HOM05D006533 ORTHO05D008625 7.2e-74 282.0 415 41.9
DCAR_009009 Daucus carota HOM05D006533 ORTHO05D008625 2.8e-73 280.0 345 45.5
SalBow4G2334 Salvia bowleyana HOM05D006533 ORTHO05D008625 4.0e-72 276.2 391 43.0
LjContig00222g0024674 Lotus japonicus HOM05D006533 ORTHO05D008625 5.7e-71 272.3 342 45.0
MELO3C006767.2 Cucumis melo HOM05D006533 ORTHO05D008625 1.7e-70 270.8 413 40.0
Nitab4.5_0005342g0010 Nicotiana tabacum HOM05D006533 ORTHO05D008625 5.4e-69 265.8 459 37.5
CBR_g24301 Chara braunii HOM05D006533 ORTHO05D008625 2.3e-67 260.4 589 32.8
SEGI_31434 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 1.9e-66 257.3 227 58.6
Rhsim03G0221300 Rhododendron simsii HOM05D006533 ORTHO05D008625 1.1e-61 241.5 391 38.1
TPR.G22023 Trifolium pratense HOM05D006533 ORTHO05D008625 2.5e-58 230.3 208 55.3
Psat2g075360 Pisum sativum HOM05D006533 ORTHO05D008625 1.3e-54 218.0 289 39.8
SalBow4G1971 Salvia bowleyana HOM05D006533 ORTHO05D008625 1.3e-54 218.0 341 41.9
Hma1.2p1_0758F.1_g213747 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.9e-53 214.2 331 39.9
Hma1.2p1_0758F.1_g213741 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.3e-51 208.0 338 38.8
Hma1.2p1_0758F.1_g213730 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.3e-51 207.2 340 38.5
Hma1.2p1_0758F.1_g213704 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.5e-50 203.8 299 40.1
arahy.Tifrunner.gnm1.ann1.1W8L1U Arachis hypogaea HOM05D006533 ORTHO05D008625 9.5e-50 201.8 178 54.5
Hma1.2p1_0758F.1_g213725 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.6e-49 201.1 299 39.8
Hma1.2p1_0758F.1_g213746 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.6e-49 201.1 299 39.8
Hma1.2p1_3802F.1_g337637 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.6e-49 201.1 299 39.8
QL09p024429 Quercus lobata HOM05D006533 ORTHO05D008625 2.6e-47 193.7 276 39.9
TPR.G37965 Trifolium pratense HOM05D006533 ORTHO05D008625 3.0e-43 180.3 244 39.8
SEGI_03149 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 3.8e-30 136.7 200 42.0
HPP92_005432 Vanilla planifolia HOM05D006533 ORTHO05D008625 5.3e-24 116.3 177 38.4
MBI06_g38701_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 2.1e-20 104.4 129 45.0
FAN01G0029 Fragaria x ananassa HOM05D006533 ORTHO05D008625 4.0e-16 90.1 93 55.9
MBI12_g01582_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 9.0e-16 89.0 120 40.0
MBI06_g38702_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 4.9e-14 83.2 119 36.1
MBI05_g26894_MAGBIO Magnolia biondii HOM05D003110 ORTHO05D003585 6.2e-09 66.2 47 63.8
Rhsim12G0119200 Rhododendron simsii HOM05D006533 ORTHO05D338813 6.5e-06 56.2 62 48.4


User provided reference genes

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