Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO339G0010 Selaginella moellendorffii HOM05D006616 ORTHO05D008435 6.9e-50 200.3 98 100.0
Pp3c10_1890 Physcomitrium patens HOM05D006616 ORTHO05D008435 3.9e-37 157.9 99 80.8
Pp3c10_1896 Physcomitrium patens HOM05D006616 ORTHO05D008435 3.9e-37 157.9 99 80.8
PSO478G1375 Papaver somniferum HOM05D006616 ORTHO05D008435 2.5e-36 155.2 96 82.3
Oeu038315.2 Olea europaea HOM05D006616 ORTHO05D008435 4.3e-36 154.5 96 81.2
SEGI_15760 Sequoiadendron giganteum HOM05D006616 ORTHO05D008435 4.3e-36 154.5 98 76.5
Cc10_g12770 Coffea canephora HOM05D006616 ORTHO05D008435 9.7e-36 153.3 98 77.6
Ah.13g077310 Amaranthus hybridus HOM05D006616 ORTHO05D008435 1.7e-35 152.5 98 77.6
Cfa019948 Carpinus fangiana HOM05D006616 ORTHO05D008435 1.7e-35 152.5 96 81.2
Lj7A350T24 Lonicera japonica HOM05D006616 ORTHO05D008435 2.2e-35 152.1 98 77.6
Mapoly0043s0041 Marchantia polymorpha HOM05D006616 ORTHO05D008435 2.2e-35 152.1 96 79.2
PSO017G2359 Papaver somniferum HOM05D006616 ORTHO05D008435 2.8e-35 151.8 96 80.2
Actinidia03423 Actinidia chinensis HOM05D006616 ORTHO05D008435 3.7e-35 151.4 96 81.2
Dinv27270 Davidia involucrata HOM05D006616 ORTHO05D008435 3.7e-35 151.4 98 77.6
HanXRQChr05g0149371 Helianthus annuus HOM05D006616 ORTHO05D008435 3.7e-35 151.4 97 78.4
MD00G1150000 Malus domestica HOM05D006616 ORTHO05D008435 3.7e-35 151.4 98 79.6
CDE04G3611 Ceratophyllum demersum HOM05D006616 ORTHO05D008435 6.3e-35 150.6 98 77.6
AUR62018417 Chenopodium quinoa HOM05D006616 ORTHO05D008435 6.3e-35 150.6 98 76.5
AUR62021025 Chenopodium quinoa HOM05D006616 ORTHO05D008435 6.3e-35 150.6 98 76.5
Rhsim11G0071400 Rhododendron simsii HOM05D006616 ORTHO05D008435 6.3e-35 150.6 98 77.6
GSVIVG01025818001 Vitis vinifera HOM05D006616 ORTHO05D008435 6.3e-35 150.6 96 79.2
Ca_02795_v3 Cicer arietinum L. HOM05D006616 ORTHO05D008435 8.2e-35 150.2 95 77.9
DCAR_014373 Daucus carota HOM05D006616 ORTHO05D008435 8.2e-35 150.2 98 77.6
Hma1.2p1_2178F.1_g316210 Hydrangea macrophylla HOM05D006616 ORTHO05D008435 8.2e-35 150.2 95 78.9
EL10Ac3g07308 Beta vulgaris HOM05D006616 ORTHO05D008435 1.1e-34 149.8 98 76.5
CSS0027023 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 1.1e-34 149.8 98 78.6
CSS0040058 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 1.1e-34 149.8 98 78.6
Phvul.007G243700 Phaseolus vulgaris HOM05D006616 ORTHO05D008435 1.1e-34 149.8 95 80.0
TAR622G0026 Trochodendron aralioides HOM05D006616 ORTHO05D008435 1.1e-34 149.8 98 75.5
VMungo0720G0485 Vigna mungo HOM05D006616 ORTHO05D008435 1.1e-34 149.8 95 80.0
arahy.Tifrunner.gnm1.ann1.958W0C Arachis hypogaea HOM05D006616 ORTHO05D008435 1.4e-34 149.4 98 80.6
arahy.Tifrunner.gnm1.ann1.QA0LD5 Arachis hypogaea HOM05D006616 ORTHO05D008435 1.4e-34 149.4 98 80.6
CANSAT78G0100 Cannabis sativa HOM05D006616 ORTHO05D008435 1.4e-34 149.4 98 76.5
Glyma.02G162000 Glycine max HOM05D006616 ORTHO05D008435 1.4e-34 149.4 94 80.9
Migut.N03264 Erythranthe guttata HOM05D006616 ORTHO05D008435 1.8e-34 149.1 97 80.4
Eucgr.A02183 Eucalyptus grandis HOM05D006616 ORTHO05D008435 1.8e-34 149.1 101 75.2
Prupe.7G020500 Prunus persica HOM05D006616 ORTHO05D008435 1.8e-34 149.1 98 76.5
SGA_v2.0_scaffold25G11136 Striga asiatica HOM05D006616 ORTHO05D008435 1.8e-34 149.1 98 77.6
ECA246G4188 Erigeron canadensis HOM05D006616 ORTHO05D008435 2.4e-34 148.7 96 78.1
Sed0024074 Sechium edule HOM05D006616 ORTHO05D008435 2.4e-34 148.7 98 76.5
Medtr1g051155 Medicago truncatula HOM05D006616 ORTHO05D008435 3.1e-34 148.3 95 76.8
MBI16_g32949_MAGBIO Magnolia biondii HOM05D006616 ORTHO05D008435 4.1e-34 147.9 98 78.6
Hund19065 Selenicereus undatus HOM05D006616 ORTHO05D008435 4.1e-34 147.9 98 76.5
Haze_20291 Corylus avellana HOM05D006616 ORTHO05D008435 5.3e-34 147.5 95 78.9
Manes.09G002500 Manihot esculenta HOM05D006616 ORTHO05D008435 5.3e-34 147.5 98 74.5
Aqoxy3G00148 Aquilegia oxysepala HOM05D006616 ORTHO05D008435 9.1e-34 146.7 98 75.5
MSTRG.24176 Avicennia marina HOM05D006616 ORTHO05D008435 9.1e-34 146.7 98 76.5
Lj5g0015037 Lotus japonicus HOM05D006616 ORTHO05D008435 9.1e-34 146.7 95 78.9
Psat6g087360 Pisum sativum HOM05D006616 ORTHO05D008435 9.1e-34 146.7 95 76.8
TPR.G13802 Trifolium pratense HOM05D006616 ORTHO05D008435 9.1e-34 146.7 95 76.8
Atru.chr1.1509 Acer truncatum HOM05D006616 ORTHO05D008435 1.2e-33 146.4 99 75.8
CARHR136140 Cardamine hirsuta HOM05D006616 ORTHO05D008435 1.2e-33 146.4 101 76.2
Lalb_Chr21g0316821 Lupinus albus HOM05D006616 ORTHO05D008435 1.2e-33 146.4 98 77.6
Nn3g18184 Nelumbo nucifera HOM05D006616 ORTHO05D008435 1.2e-33 146.4 97 75.3
CiPaw.10G044000 Carya illinoinensis HOM05D006616 ORTHO05D008435 1.5e-33 146.0 96 79.2
CsaV3_3G040470 Cucumis sativus L. HOM05D006616 ORTHO05D008435 1.5e-33 146.0 98 74.5
ATR0326G030 Amborella trichopoda HOM05D006616 ORTHO05D008435 2.0e-33 145.6 97 76.3
Potri.006G032200 Populus trichocarpa HOM05D006616 ORTHO05D008435 2.0e-33 145.6 98 74.5
PGR042G1816 Punica granatum HOM05D006616 ORTHO05D008435 3.4e-33 144.8 98 77.6
TWI74G0800 Tripterygium wilfordii HOM05D006616 ORTHO05D008435 3.4e-33 144.8 95 76.8
Zm00001eb364810 Zea mays HOM05D006616 ORTHO05D008435 3.4e-33 144.8 96 79.2
Duzib128G1745 Durio zibethinus HOM05D006616 ORTHO05D008435 4.5e-33 144.4 87 79.3
SalBow2G2978 Salvia bowleyana HOM05D006616 ORTHO05D008435 4.5e-33 144.4 98 75.5
FAN28G1824 Fragaria x ananassa HOM05D006616 ORTHO05D008435 5.9e-33 144.1 97 78.4
Sabra06G0021500 Salix brachista HOM05D006616 ORTHO05D008435 5.9e-33 144.1 95 74.7
RcHm_v2.0_Chr3g0494671 Rosa chinensis HOM05D006616 ORTHO05D008435 1.0e-32 143.3 97 78.4
HPP92_023122 Vanilla planifolia HOM05D006616 ORTHO05D008435 1.0e-32 143.3 100 75.0
Sp4g23340 Schrenkiella parvula HOM05D006616 ORTHO05D008435 1.3e-32 142.9 96 78.1
Os01g0916300 Oryza sativa ssp. japonica HOM05D006616 ORTHO05D008435 1.7e-32 142.5 96 78.1
unitig_52.g17546 Utricularia gibba HOM05D006616 ORTHO05D008435 1.7e-32 142.5 101 75.2
AL4G39000 Arabidopsis lyrata HOM05D006616 ORTHO05D008435 2.2e-32 142.1 101 74.3
Carub.0004s2335 Capsella rubella HOM05D006616 ORTHO05D008435 2.2e-32 142.1 96 78.1
AT2G41020 Arabidopsis thaliana HOM05D006616 ORTHO05D008435 2.9e-32 141.7 101 74.3
FAN19G2668 Fragaria x ananassa HOM05D006616 ORTHO05D008435 2.9e-32 141.7 97 77.3
QL07p014063 Quercus lobata HOM05D006616 ORTHO05D008435 2.9e-32 141.7 94 77.7
Gohir.A11G305800 Gossypium hirsutum HOM05D006616 ORTHO05D008435 3.8e-32 141.4 87 78.2
Gorai.007G351400 Gossypium raimondii HOM05D006616 ORTHO05D008435 3.8e-32 141.4 87 78.2
BcaC02g12875 Brassica carinata HOM05D006616 ORTHO05D008435 6.5e-32 140.6 96 76.0
C04p68740 Brassica napus HOM05D006616 ORTHO05D008435 6.5e-32 140.6 96 76.0
CAN.G526.15 Capsicum annuum HOM05D006616 ORTHO05D008435 8.5e-32 140.2 95 76.8
FAN26G1972 Fragaria x ananassa HOM05D006616 ORTHO05D008435 1.1e-31 139.8 97 76.3
Gohir.D11G321200 Gossypium hirsutum HOM05D006616 ORTHO05D008435 1.1e-31 139.8 87 77.0
THA.LOC104815412 Tarenaya hassleriana HOM05D006616 ORTHO05D008435 1.1e-31 139.8 98 77.6
Thecc.05G123900 Theobroma cacao HOM05D006616 ORTHO05D008435 1.1e-31 139.8 98 72.4
Aa31LG3G1010 Aethionema arabicum HOM05D006616 ORTHO05D008435 1.4e-31 139.4 99 73.7
Thhalv10002504m.g Eutrema salsugineum HOM05D006616 ORTHO05D008435 3.2e-31 138.3 96 74.0
Peaxi162Scf00066g00130 Petunia axillaris HOM05D006616 ORTHO05D008435 1.2e-30 136.3 94 73.4
MELO3C009780.2 Cucumis melo HOM05D006616 ORTHO05D008435 2.7e-30 135.2 115 63.5
A04p31340 Brassica napus HOM05D006616 ORTHO05D002641 2.6e-28 128.6 89 74.2
BraA04t18591Z Brassica rapa HOM05D006616 ORTHO05D002641 2.6e-28 128.6 89 74.2
FAN23G2418 Fragaria x ananassa HOM05D006616 ORTHO05D008435 4.4e-28 127.9 82 82.9
BolC4t28379H Brassica oleracea HOM05D006616 ORTHO05D008435 1.3e-27 126.3 89 73.0
Solyc11g005110.3 Solanum lycopersicum HOM05D006616 ORTHO05D008435 2.2e-27 125.6 79 79.7
Sopen11g001110 Solanum pennellii HOM05D006616 ORTHO05D008435 2.2e-27 125.6 79 79.7
AagrBONN_evm.TU.Sc2ySwM_228.200 Anthoceros agrestis HOM05D006616 ORTHO05D008435 1.1e-26 123.2 90 73.3
Lsat_1_v5_gn_6_110180 Lactuca sativa HOM05D006616 ORTHO05D008435 1.3e-24 116.3 67 85.1
vmacro00862 Vaccinium macrocarpon HOM05D006616 ORTHO05D008435 8.5e-24 113.6 67 85.1
ClCG10G015990 Citrullus lanatus HOM05D006616 ORTHO05D008435 2.1e-22 109.0 67 82.1
FvH4_1g29230 Fragaria vesca HOM05D006616 ORTHO05D008435 1.4e-21 106.3 67 83.6
Nitab4.5_0001168g0150 Nicotiana tabacum HOM05D006616 ORTHO05D008435 3.0e-21 105.1 67 77.6
Ciclev10011646m.g Citrus clementina HOM05D006616 ORTHO05D008435 5.2e-21 104.4 87 64.4
Nitab4.5_0003863g0020 Nicotiana tabacum HOM05D006616 ORTHO05D008435 1.1e-20 103.2 150 43.3
Cre12.g527600 Chlamydomonas reinhardtii HOM05D006616 ORTHO05D008435 1.1e-15 86.7 69 59.4
Migut.C01363 Erythranthe guttata HOM05D006616 ORTHO05D008435 1.8e-10 69.3 97 49.5
SHI24850 Sapria himalayana HOM05D006616 ORTHO05D008435 3.1e-10 68.6 47 70.2
BcaC02g07966 Brassica carinata HOM05D001681 ORTHO05D001589 4.5e-09 64.7 50 70.0
MCO09G511 Micromonas commoda HOM05D006616 ORTHO05D008435 5.0e-08 61.2 92 44.6


User provided reference genes

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