Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO308G0023 Selaginella moellendorffii HOM05D005981 ORTHO05D007551 3.7e-252 874.4 444 100.0
SMO308G0062 Selaginella moellendorffii HOM05D005981 ORTHO05D007551 1.2e-245 852.8 473 93.2
SMO210G0002 Selaginella moellendorffii HOM05D005981 ORTHO05D007551 1.6e-61 241.1 219 64.8
SMO271G0001 Selaginella moellendorffii HOM05D005981 ORTHO05D007551 1.2e-56 224.9 137 86.1
SMO210G0005 Selaginella moellendorffii HOM05D005981 ORTHO05D007551 3.3e-51 206.8 107 98.1
SMO271G0041 Selaginella moellendorffii HOM05D005981 ORTHO05D007551 8.3e-42 175.6 194 56.7
SMO174G0158 Selaginella moellendorffii HOM05D005981 ORTHO05D007551 7.0e-41 172.6 161 63.4
SMO308G0008 Selaginella moellendorffii HOM05D005981 ORTHO05D007551 1.2e-40 171.8 194 53.6
PSO017G5512 Papaver somniferum HOM05D005981 ORTHO05D007551 2.4e-25 120.9 157 45.2
Phvul.004G084494 Phaseolus vulgaris HOM05D005981 ORTHO05D007551 9.2e-25 119.0 163 44.2
arahy.Tifrunner.gnm1.ann1.SEU8EV Arachis hypogaea HOM05D005981 ORTHO05D007551 1.6e-24 118.2 188 41.0
arahy.Tifrunner.gnm1.ann1.VB64T6 Arachis hypogaea HOM05D005981 ORTHO05D007551 1.6e-24 118.2 188 41.0
Cc00_g04830 Coffea canephora HOM05D005981 ORTHO05D007551 2.7e-24 117.5 173 43.4
MELO3C008115.2 Cucumis melo HOM05D005981 ORTHO05D007551 2.7e-24 117.5 166 42.8
Manes.18G100000 Manihot esculenta HOM05D005981 ORTHO05D007551 2.7e-24 117.5 163 43.6
MBI17_g15293_MAGBIO Magnolia biondii HOM05D005981 ORTHO05D007551 3.5e-24 117.1 176 42.6
Thecc.08G202800 Theobroma cacao HOM05D005981 ORTHO05D007551 3.5e-24 117.1 185 41.1
ClCG11G008230 Citrullus lanatus HOM05D005981 ORTHO05D007551 4.6e-24 116.7 166 42.2
DCAR_023098 Daucus carota HOM05D005981 ORTHO05D007551 4.6e-24 116.7 166 41.6
CSS0002602 Camellia sinensis var. sinensis HOM05D005981 ORTHO05D007551 5.9e-24 116.3 176 40.3
Sed0004103 Sechium edule HOM05D005981 ORTHO05D007551 5.9e-24 116.3 171 41.5
Atru.chr13.1806 Acer truncatum HOM05D005981 ORTHO05D007551 7.8e-24 115.9 168 41.7
Atru.chr13.1816 Acer truncatum HOM05D005981 ORTHO05D007551 7.8e-24 115.9 168 41.7
Aa31LG6G8450 Aethionema arabicum HOM05D005981 ORTHO05D007551 7.8e-24 115.9 160 42.5
CsaV3_2G033430 Cucumis sativus L. HOM05D005981 ORTHO05D007551 7.8e-24 115.9 166 42.2
Potri.013G114400 Populus trichocarpa HOM05D005981 ORTHO05D007551 1.0e-23 115.5 166 42.2
Sabra13G0096800 Salix brachista HOM05D005981 ORTHO05D008130 1.0e-23 115.5 166 42.2
Actinidia23324 Actinidia chinensis HOM05D005981 ORTHO05D007551 1.3e-23 115.2 176 40.9
THA.LOC104806782 Tarenaya hassleriana HOM05D005981 ORTHO05D007551 1.3e-23 115.2 156 42.3
VMungo0464G1554 Vigna mungo HOM05D005981 ORTHO05D007551 1.3e-23 115.2 159 43.4
RcHm_v2.0_Chr6g0272141 Rosa chinensis HOM05D005981 ORTHO05D007551 1.7e-23 114.8 192 38.0
CANSAT56G4197 Cannabis sativa HOM05D005981 ORTHO05D007551 2.3e-23 114.4 214 36.9
AL1G48940 Arabidopsis lyrata HOM05D005981 ORTHO05D007551 2.9e-23 114.0 160 42.5
QL02p034064 Quercus lobata HOM05D005981 ORTHO05D007551 2.9e-23 114.0 160 42.5
FAN20G1782 Fragaria x ananassa HOM05D005981 ORTHO05D007551 3.9e-23 113.6 192 36.5
MBI17_g01761_MAGBIO Magnolia biondii HOM05D005981 ORTHO05D007551 3.9e-23 113.6 176 42.0
Mapoly0035s0044 Marchantia polymorpha HOM05D005981 ORTHO05D007551 3.9e-23 113.6 211 35.1
GSVIVG01034499001 Vitis vinifera HOM05D005981 ORTHO05D007551 3.9e-23 113.6 166 40.4
Pp3c1_23520 Physcomitrium patens HOM05D005981 ORTHO05D007551 5.0e-23 113.2 174 43.1
BraA09t38748Z Brassica rapa HOM05D005981 ORTHO05D007551 8.6e-23 112.5 160 41.9
FvH4_2g12160 Fragaria vesca HOM05D005981 ORTHO05D007551 8.6e-23 112.5 192 36.5
FAN24G2303 Fragaria x ananassa HOM05D005981 ORTHO05D007551 8.6e-23 112.5 192 36.5
FAN27G0258 Fragaria x ananassa HOM05D005981 ORTHO05D007551 8.6e-23 112.5 192 36.5
Sp1g29600 Schrenkiella parvula HOM05D005981 ORTHO05D007551 1.1e-22 112.1 160 41.9
Hund27079 Selenicereus undatus HOM05D005981 ORTHO05D007551 1.1e-22 112.1 160 42.5
BcaB07g33127 Brassica carinata HOM05D005981 ORTHO05D007551 1.5e-22 111.7 160 41.2
ATR1134G043 Amborella trichopoda HOM05D005981 ORTHO05D007551 1.9e-22 111.3 157 42.7
CARHR033840 Cardamine hirsuta HOM05D005981 ORTHO05D007551 1.9e-22 111.3 160 41.9
Migut.C01243 Erythranthe guttata HOM05D005981 ORTHO05D007551 1.9e-22 111.3 163 39.3
HanXRQChr04g0107411 Helianthus annuus HOM05D005981 ORTHO05D007551 1.9e-22 111.3 156 44.2
AT1G34380 Arabidopsis thaliana HOM05D005981 ORTHO05D007551 2.5e-22 110.9 160 41.2
EL10Ac1g00070 Beta vulgaris HOM05D005981 ORTHO05D007551 2.5e-22 110.9 159 44.7
BcaC08g43776 Brassica carinata HOM05D005981 ORTHO05D007551 2.5e-22 110.9 156 42.3
C06p11540 Brassica napus HOM05D005981 ORTHO05D007551 2.5e-22 110.9 156 42.3
BolC6t36287H Brassica oleracea HOM05D005981 ORTHO05D007551 2.5e-22 110.9 156 42.3
Carub.0001s3253 Capsella rubella HOM05D005981 ORTHO05D007551 2.5e-22 110.9 160 40.6
Gohir.A05G274500 Gossypium hirsutum HOM05D005981 ORTHO05D007551 2.5e-22 110.9 163 41.7
Psat1g098600 Pisum sativum HOM05D005981 ORTHO05D007551 2.5e-22 110.9 188 39.9
MD10G1046800 Malus domestica HOM05D005981 ORTHO05D007551 3.3e-22 110.5 195 37.9
TWI60G0628 Tripterygium wilfordii HOM05D005981 ORTHO05D007551 3.3e-22 110.5 157 41.4
AUR62004659 Chenopodium quinoa HOM05D005981 ORTHO05D007551 4.3e-22 110.2 163 43.6
Ciclev10001512m.g Citrus clementina HOM05D005981 ORTHO05D007551 4.3e-22 110.2 160 40.6
Gohir.D05G276700 Gossypium hirsutum HOM05D005981 ORTHO05D007551 4.3e-22 110.2 163 41.7
Aqoxy5G02601 Aquilegia oxysepala HOM05D005981 ORTHO05D007551 5.6e-22 109.8 176 40.3
CAN.G61.32 Capsicum annuum HOM05D005981 ORTHO05D007551 5.6e-22 109.8 190 37.4
Nitab4.5_0000159g0230 Nicotiana tabacum HOM05D005981 ORTHO05D007551 5.6e-22 109.8 163 39.9
Prupe.8G055700 Prunus persica HOM05D005981 ORTHO05D007551 5.6e-22 109.8 195 37.4
Rhsim04G0161600 Rhododendron simsii HOM05D005981 ORTHO05D007551 5.6e-22 109.8 181 39.2
Rhsim06G0097100 Rhododendron simsii HOM05D005981 ORTHO05D007551 5.6e-22 109.8 181 39.2
Ah.05g177990 Amaranthus hybridus HOM05D005981 ORTHO05D001449 7.3e-22 109.4 167 38.9
A09p32090 Brassica napus HOM05D005981 ORTHO05D007551 7.3e-22 109.4 157 41.4
CiPaw.16G062400 Carya illinoinensis HOM05D005981 ORTHO05D007551 7.3e-22 109.4 213 33.8
Thhalv10008072m.g Eutrema salsugineum HOM05D005981 ORTHO05D007551 7.3e-22 109.4 160 40.6
TPR.G36660 Trifolium pratense HOM05D005981 ORTHO05D007551 7.3e-22 109.4 188 39.9
Eucgr.F04135 Eucalyptus grandis HOM05D005981 ORTHO05D007551 9.5e-22 109.0 194 37.1
PGR119G0141 Punica granatum HOM05D005981 ORTHO05D007551 9.5e-22 109.0 166 41.6
SalBow7G4031 Salvia bowleyana HOM05D006403 ORTHO05D008130 9.5e-22 109.0 159 40.9
Duzib177G0330 Durio zibethinus HOM05D005981 ORTHO05D007551 1.2e-21 108.6 157 42.0
Medtr6g033525 Medicago truncatula HOM05D005981 ORTHO05D007551 1.2e-21 108.6 156 42.3
Peaxi162Scf00495g00015 Petunia axillaris HOM05D005981 ORTHO05D007551 1.2e-21 108.6 156 41.0
Lalb_Chr03g0035881 Lupinus albus HOM05D005981 ORTHO05D007551 1.6e-21 108.2 168 39.3
AUR62023576 Chenopodium quinoa HOM05D005981 ORTHO05D007551 2.1e-21 107.8 163 42.3
Os01g0874800 Oryza sativa ssp. japonica HOM05D005981 ORTHO05D007551 2.1e-21 107.8 154 45.5
Solyc11g017230.2 Solanum lycopersicum HOM05D005981 ORTHO05D007551 2.1e-21 107.8 163 38.7
Sopen11g009130 Solanum pennellii HOM05D005981 ORTHO05D007551 2.1e-21 107.8 163 38.7
Ca_14000_v3 Cicer arietinum L. HOM05D005981 ORTHO05D007551 2.8e-21 107.5 163 41.7
Lsat_1_v5_gn_1_10481 Lactuca sativa HOM05D005981 ORTHO05D007551 2.8e-21 107.5 180 38.3
Lj2g0016315 Lotus japonicus HOM05D005981 ORTHO05D007551 2.8e-21 107.5 163 40.5
CSS0046436 Camellia sinensis var. sinensis HOM05D005981 ORTHO05D007551 4.7e-21 106.7 92 56.5
vmacro12496 Vaccinium macrocarpon HOM05D005981 ORTHO05D007551 4.7e-21 106.7 170 40.0
Oeu021010.1 Olea europaea HOM05D005981 ORTHO05D007551 8.0e-21 105.9 163 39.9
MD05G1040800 Malus domestica HOM05D005981 ORTHO05D007551 1.0e-20 105.5 166 39.2
AagrBONN_evm.TU.Sc2ySwM_344.1289 Anthoceros agrestis HOM05D005981 ORTHO05D007551 1.4e-20 105.1 163 39.9
Dinv41689 Davidia involucrata HOM05D005981 ORTHO05D007551 1.8e-20 104.8 88 55.7
Zm00001eb146190 Zea mays HOM05D005981 ORTHO05D007551 1.8e-20 104.8 161 41.6
Nitab4.5_0006099g0030 Nicotiana tabacum HOM05D005981 ORTHO05D007551 2.3e-20 104.4 157 40.8
Sc23g0001130 Simmondsia chinensis HOM05D005981 ORTHO05D007551 2.3e-20 104.4 162 39.5
HPP92_000088 Vanilla planifolia HOM05D005981 ORTHO05D007551 2.3e-20 104.4 163 42.3
Lj7A293G47 Lonicera japonica HOM05D005981 ORTHO05D007551 8.9e-20 102.4 184 35.9
SGA_v2.0_scaffold118G32466 Striga asiatica HOM05D005981 ORTHO05D007551 2.6e-19 100.9 157 38.2
unitig_747.g21468 Utricularia gibba HOM05D005981 ORTHO05D007551 3.4e-19 100.5 161 39.1
Gorai.009G289700 Gossypium raimondii HOM05D005981 ORTHO05D007551 5.8e-19 99.8 153 41.2
PGR102G3248 Punica granatum HOM05D005981 ORTHO05D007551 7.5e-19 99.4 84 56.0
Cfa014371 Carpinus fangiana HOM05D005981 ORTHO05D007551 9.8e-19 99.0 84 56.0
SEGI_14270 Sequoiadendron giganteum HOM05D005981 ORTHO05D007551 9.8e-19 99.0 80 58.8
MSTRG.1517 Avicennia marina HOM05D005981 ORTHO05D007551 3.7e-18 97.1 80 57.5
CDE06G1238 Ceratophyllum demersum HOM05D005981 ORTHO05D007551 2.4e-17 94.4 147 41.5
COL.COLO4_36657 Corchorus olitorius HOM05D005981 ORTHO05D007551 2.0e-16 91.3 72 62.5
PGSC0003DMG400009236 Solanum tuberosum HOM05D005981 ORTHO05D007551 3.5e-16 90.5 73 60.3
HPP92_000081 Vanilla planifolia HOM05D005981 ORTHO05D007551 1.7e-15 88.2 152 38.8
Glyma.02G074400 Glycine max HOM05D005981 ORTHO05D007551 1.5e-14 85.1 61 65.6
MSTRG.1511 Avicennia marina HOM05D005981 ORTHO05D007551 1.4e-12 78.6 132 39.4
CBR_g56098 Chara braunii HOM05D005981 ORTHO05D007551 3.1e-12 77.4 163 35.6
Glyma.16G156300 Glycine max HOM05D005981 ORTHO05D007551 7.1e-09 66.2 159 32.7
AagrBONN_evm.TU.Sc2ySwM_228.1809 Anthoceros agrestis HOM05D005531 ORTHO05D006332 2.3e-07 61.2 112 34.8
Pp3c16_17520 Physcomitrium patens HOM05D005531 ORTHO05D006332 8.6e-07 59.3 171 26.9
AagrBONN_evm.TU.Sc2ySwM_228.5815 Anthoceros agrestis HOM05D005531 ORTHO05D006332 1.5e-06 58.5 112 32.1


User provided reference genes

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