Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO307G0084 Selaginella moellendorffii HOM05D001598 ORTHO05D007192 6.6e-34 146.7 71 100.0
SMO145G0256 Selaginella moellendorffii HOM05D001598 ORTHO05D007192 4.1e-20 100.9 67 73.1
arahy.Tifrunner.gnm1.ann1.4UW9RQ Arachis hypogaea HOM05D001598 ORTHO05D007192 1.4e-12 75.9 75 49.3
arahy.Tifrunner.gnm1.ann1.IS34PQ Arachis hypogaea HOM05D001598 ORTHO05D007192 1.4e-12 75.9 75 49.3
Pp3c14_4050 Physcomitrium patens HOM05D001598 ORTHO05D007192 1.2e-11 72.8 63 52.4
AUR62001598 Chenopodium quinoa HOM05D001598 ORTHO05D007192 2.7e-11 71.6 65 46.2
QL01p007286 Quercus lobata HOM05D001598 ORTHO05D007192 3.5e-11 71.2 62 51.6
Aqoxy3G02341 Aquilegia oxysepala HOM05D001598 ORTHO05D007192 4.6e-11 70.9 62 53.2
AUR62020182 Chenopodium quinoa HOM05D001598 ORTHO05D007192 6.0e-11 70.5 65 46.2
Glyma.02G272700 Glycine max HOM05D001598 ORTHO05D007192 6.0e-11 70.5 65 49.2
AagrBONN_evm.TU.Sc2ySwM_117.1323 Anthoceros agrestis HOM05D001598 ORTHO05D007192 7.8e-11 70.1 62 51.6
Sp6g23530 Schrenkiella parvula HOM05D001598 ORTHO05D007192 7.8e-11 70.1 65 46.2
AL6G32560 Arabidopsis lyrata HOM05D001598 ORTHO05D007192 1.0e-10 69.7 65 44.6
Prupe.6G153900 Prunus persica HOM05D001598 ORTHO05D007192 1.0e-10 69.7 62 50.0
CiPaw.13G127200 Carya illinoinensis HOM05D001598 ORTHO05D007192 1.3e-10 69.3 62 48.4
Haze_23633 Corylus avellana HOM05D001598 ORTHO05D007192 3.0e-10 68.2 62 46.8
AT5G20990 Arabidopsis thaliana HOM05D001598 ORTHO05D007192 3.9e-10 67.8 65 43.1
CARHR191850 Cardamine hirsuta HOM05D001598 ORTHO05D007192 3.9e-10 67.8 65 41.5
Eucgr.J00614 Eucalyptus grandis HOM05D001598 ORTHO05D007192 3.9e-10 67.8 61 49.2
BolC3t13663H Brassica oleracea HOM05D001598 ORTHO05D007192 6.6e-10 67.0 69 42.0
Sabra09G0122500 Salix brachista HOM05D001598 ORTHO05D007192 6.6e-10 67.0 65 46.2
ATR0215G007 Amborella trichopoda HOM05D001598 ORTHO05D007192 8.6e-10 66.6 65 47.7
A03p10390 Brassica napus HOM05D001598 ORTHO05D007192 1.1e-09 66.2 65 43.1
C03p11930 Brassica napus HOM05D001598 ORTHO05D007192 1.1e-09 66.2 65 43.1
BraA03t10351Z Brassica rapa HOM05D001598 ORTHO05D007192 1.1e-09 66.2 65 43.1
Carub.0006s1931 Capsella rubella HOM05D001598 ORTHO05D007192 1.1e-09 66.2 65 43.1
Gohir.D05G078700 Gossypium hirsutum HOM05D001598 ORTHO05D007192 1.1e-09 66.2 65 44.6
Gorai.009G080100 Gossypium raimondii HOM05D001598 ORTHO05D007192 1.1e-09 66.2 65 44.6
Cc01_g07890 Coffea canephora HOM05D001598 ORTHO05D007192 1.5e-09 65.9 62 46.8
Lalb_Chr10g0105801 Lupinus albus HOM05D001598 ORTHO05D007192 1.5e-09 65.9 70 45.7
Nitab4.5_0002300g0120 Nicotiana tabacum HOM05D001598 ORTHO05D007192 1.5e-09 65.9 62 48.4
GSVIVG01037501001 Vitis vinifera HOM05D001598 ORTHO05D007192 1.5e-09 65.9 66 43.9
Lj2C893G11 Lonicera japonica HOM05D001598 ORTHO05D007192 1.9e-09 65.5 62 46.8
Manes.11G103300 Manihot esculenta HOM05D001598 ORTHO05D007192 1.9e-09 65.5 65 44.6
Sc21g0006570 Simmondsia chinensis HOM05D001598 ORTHO05D007192 1.9e-09 65.5 65 46.2
Cre10.g451400 Chlamydomonas reinhardtii HOM05D001598 ORTHO05D007192 2.5e-09 65.1 62 51.6
Gohir.A05G076000 Gossypium hirsutum HOM05D001598 ORTHO05D007192 2.5e-09 65.1 65 43.1
MD11G1181200 Malus domestica HOM05D001598 ORTHO05D007192 2.5e-09 65.1 62 46.8
PSO063G3947 Papaver somniferum HOM05D001598 ORTHO05D007192 2.5e-09 65.1 69 44.9
Potri.009G156400 Populus trichocarpa HOM05D001598 ORTHO05D007192 2.5e-09 65.1 65 44.6
Sed0001025 Sechium edule HOM05D001598 ORTHO05D007192 2.5e-09 65.1 65 44.6
ClCG03G014390 Citrullus lanatus HOM05D001598 ORTHO05D007192 3.3e-09 64.7 66 43.9
Thecc.09G265000 Theobroma cacao HOM05D001598 ORTHO05D007192 3.3e-09 64.7 62 46.8
CSS0038227 Camellia sinensis var. sinensis HOM05D001598 ORTHO05D007192 5.6e-09 63.9 62 45.2
CSS0048937 Camellia sinensis var. sinensis HOM05D001598 ORTHO05D007192 5.6e-09 63.9 62 45.2
CANSAT54G2824 Cannabis sativa HOM05D001598 ORTHO05D007192 5.6e-09 63.9 62 46.8
Ah.08g222590 Amaranthus hybridus HOM05D001598 ORTHO05D007192 7.3e-09 63.5 65 46.2
Medtr5g087490 Medicago truncatula HOM05D001598 ORTHO05D007192 7.3e-09 63.5 65 46.2
Atru.chr3.2751 Acer truncatum HOM05D001598 ORTHO05D007192 9.5e-09 63.2 62 45.2
CAN.G651.7 Capsicum annuum HOM05D001598 ORTHO05D007192 9.5e-09 63.2 62 46.8
CsaV3_1G041840 Cucumis sativus L. HOM05D001598 ORTHO05D007192 9.5e-09 63.2 65 43.1
Dinv32128 Davidia involucrata HOM05D001598 ORTHO05D007192 9.5e-09 63.2 62 45.2
FvH4_3g26260 Fragaria vesca HOM05D001598 ORTHO05D007192 9.5e-09 63.2 62 46.8
FAN11G2542 Fragaria x ananassa HOM05D001598 ORTHO05D007192 9.5e-09 63.2 62 46.8
FAN21G0325 Fragaria x ananassa HOM05D001598 ORTHO05D007192 9.5e-09 63.2 62 46.8
FAN25G1601 Fragaria x ananassa HOM05D001598 ORTHO05D007192 9.5e-09 63.2 62 46.8
AagrBONN_evm.TU.Sc2ySwM_228.3025 Anthoceros agrestis HOM05D001598 ORTHO05D007192 1.2e-08 62.8 62 46.8
COL.COLO4_25318 Corchorus olitorius HOM05D001598 ORTHO05D007192 1.2e-08 62.8 62 45.2
MELO3C015599.2 Cucumis melo HOM05D001598 ORTHO05D007192 1.2e-08 62.8 65 43.1
MBI07_g03077_MAGBIO Magnolia biondii HOM05D001598 ORTHO05D007192 1.2e-08 62.8 62 45.2
Mapoly1495s0001 Marchantia polymorpha HOM05D001598 ORTHO05D007192 1.2e-08 62.8 63 46.0
RcHm_v2.0_Chr5g0048741 Rosa chinensis HOM05D001598 ORTHO05D007192 1.2e-08 62.8 63 46.0
TAR375G0698 Trochodendron aralioides HOM05D001598 ORTHO05D007192 1.2e-08 62.8 62 46.8
Aa31LG1G13740 Aethionema arabicum HOM05D001598 ORTHO05D007192 1.6e-08 62.4 65 41.5
LjContig00564g0017485 Lotus japonicus HOM05D001598 ORTHO05D007192 1.6e-08 62.4 65 44.6
MCO09G295 Micromonas commoda HOM05D001598 ORTHO05D007192 1.6e-08 62.4 64 45.3
Nitab4.5_0000428g0110 Nicotiana tabacum HOM05D001598 ORTHO05D007192 2.1e-08 62.0 62 48.4
Oeu051504.1 Olea europaea HOM05D001598 ORTHO05D007192 2.1e-08 62.0 62 46.8
Peaxi162Scf00050g02227 Petunia axillaris HOM05D001598 ORTHO05D007192 2.1e-08 62.0 67 47.8
Psat2g023160 Pisum sativum HOM05D001598 ORTHO05D007192 2.1e-08 62.0 65 44.6
VMungo0647G2429 Vigna mungo HOM05D001598 ORTHO05D007192 2.1e-08 62.0 65 44.6
DCAR_000741 Daucus carota HOM05D001598 ORTHO05D007192 2.8e-08 61.6 65 43.1
Thhalv10012894m.g Eutrema salsugineum HOM05D001598 ORTHO05D007192 2.8e-08 61.6 65 40.0
Ciclev10014503m.g Citrus clementina HOM05D001598 ORTHO05D007192 3.6e-08 61.2 65 44.6
Phvul.008G209600 Phaseolus vulgaris HOM05D001598 ORTHO05D007192 3.6e-08 61.2 65 44.6
Hund20974 Selenicereus undatus HOM05D001598 ORTHO05D007192 3.6e-08 61.2 64 42.2
vmacro14297 Vaccinium macrocarpon HOM05D001598 ORTHO05D007192 3.6e-08 61.2 65 38.5
CDE02G2133 Ceratophyllum demersum HOM05D001598 ORTHO05D007192 4.7e-08 60.8 63 46.0
SEGI_00915 Sequoiadendron giganteum HOM05D001598 ORTHO05D007192 4.7e-08 60.8 62 46.8
SEGI_02371 Sequoiadendron giganteum HOM05D001598 ORTHO05D007192 4.7e-08 60.8 62 46.8
TWI31G0930 Tripterygium wilfordii HOM05D001598 ORTHO05D007192 4.7e-08 60.8 62 45.2
PRCOL_00000516 Prasinoderma coloniale HOM05D005603 ORTHO05D006944 6.2e-08 60.5 67 43.3
PGR119G0245 Punica granatum HOM05D001598 ORTHO05D007192 6.2e-08 60.5 60 48.3
CDE06G2705 Ceratophyllum demersum HOM05D001598 ORTHO05D007192 8.1e-08 60.1 63 44.4
TPR.G11692 Trifolium pratense HOM05D001598 ORTHO05D007192 8.1e-08 60.1 65 43.1
Hma1.2p1_0218F.1_g092460 Hydrangea macrophylla HOM05D001598 ORTHO05D007192 1.1e-07 59.7 62 41.9
Cpa.g.sc34.224 Carica papaya HOM05D001598 ORTHO05D007192 1.4e-07 59.3 62 43.5
Migut.N02410 Erythranthe guttata HOM05D001598 ORTHO05D007192 1.8e-07 58.9 69 43.5
SalBow3G4459 Salvia bowleyana HOM05D001598 ORTHO05D007192 1.8e-07 58.9 62 45.2
Solyc01g009050.3 Solanum lycopersicum HOM05D001598 ORTHO05D007192 1.8e-07 58.9 62 43.5
Sopen01g004540 Solanum pennellii HOM05D001598 ORTHO05D007192 1.8e-07 58.9 62 43.5
SGA_v2.0_scaffold16G07584 Striga asiatica HOM05D001598 ORTHO05D007192 1.8e-07 58.9 62 43.5
unitig_8.g2986 Utricularia gibba HOM05D001598 ORTHO05D007192 2.4e-07 58.5 63 44.4
MSTRG.12417 Avicennia marina HOM05D001598 ORTHO05D007192 3.1e-07 58.2 62 41.9
Rhsim01G0197500 Rhododendron simsii HOM05D001598 ORTHO05D007192 4.0e-07 57.8 62 40.3
Actinidia22467 Actinidia chinensis HOM05D001598 ORTHO05D007192 5.2e-07 57.4 65 38.5
HPP92_013469 Vanilla planifolia HOM05D001598 ORTHO05D007192 6.8e-07 57.0 62 45.2
Zm00001eb432770 Zea mays HOM05D001598 ORTHO05D007192 6.8e-07 57.0 61 42.6
HanXRQChr06g0180651 Helianthus annuus HOM05D001598 ORTHO05D007192 8.9e-07 56.6 63 42.9
ECA247G1799 Erigeron canadensis HOM05D001598 ORTHO05D007192 1.5e-06 55.8 64 39.1
EL10Ac7g16239 Beta vulgaris HOM05D001598 ORTHO05D007192 4.4e-06 54.3 104 27.9


User provided reference genes

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