Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO302G0051 Selaginella moellendorffii HOM05D005876 ORTHO05D007326 1.4e-162 576.2 294 100.0
SMO353G0015 Selaginella moellendorffii HOM05D005876 ORTHO05D007326 1.1e-132 476.9 294 86.7
Mapoly0065s0033 Marchantia polymorpha HOM05D005876 ORTHO05D007326 1.1e-42 177.9 300 41.3
AagrBONN_evm.TU.Sc2ySwM_117.3742 Anthoceros agrestis HOM05D005876 ORTHO05D007326 8.2e-38 161.8 266 40.2
Pp3c22_13580 Physcomitrium patens HOM05D005876 ORTHO05D007326 5.9e-36 155.6 243 40.7
SEGI_25369 Sequoiadendron giganteum HOM05D005876 ORTHO05D007326 3.7e-30 136.3 217 37.3
ATR0618G001 Amborella trichopoda HOM05D005876 ORTHO05D007326 3.4e-28 129.8 242 34.3
Potri.001G033900 Populus trichocarpa HOM05D005876 ORTHO05D007326 3.4e-28 129.8 246 34.1
vmacro08700 Vaccinium macrocarpon HOM05D005876 ORTHO05D007326 7.7e-28 128.6 217 36.4
CANSAT80G1885 Cannabis sativa HOM05D005876 ORTHO05D007326 6.5e-27 125.6 216 34.7
Zm00001eb290190 Zea mays HOM05D005876 ORTHO05D007326 4.2e-26 122.9 217 36.4
HanXRQChr07g0195281 Helianthus annuus HOM05D005876 ORTHO05D007326 5.5e-26 122.5 211 37.0
QL07p024280 Quercus lobata HOM05D005876 ORTHO05D007326 5.5e-26 122.5 215 35.3
Aa31LG1G25010 Aethionema arabicum HOM05D005876 ORTHO05D007326 1.2e-25 121.3 241 33.6
CAN.G1676.1 Capsicum annuum HOM05D005876 ORTHO05D007326 1.2e-25 121.3 292 32.2
CSS0006806 Camellia sinensis var. sinensis HOM05D005876 ORTHO05D007326 2.7e-25 120.2 217 34.1
DCAR_009286 Daucus carota HOM05D005876 ORTHO05D007326 3.6e-25 119.8 216 36.6
PGSC0003DMG400001766 Solanum tuberosum HOM05D005876 ORTHO05D007326 4.6e-25 119.4 310 31.6
CARHR138250 Cardamine hirsuta HOM05D005876 ORTHO05D007326 6.1e-25 119.0 248 33.1
BraA05t19352Z Brassica rapa HOM05D005876 ORTHO05D007326 7.9e-25 118.6 203 38.4
Os05g0472300 Oryza sativa ssp. japonica HOM05D005876 ORTHO05D007326 7.9e-25 118.6 274 32.8
A05p03670 Brassica napus HOM05D005876 ORTHO05D007326 1.0e-24 118.2 203 38.4
CSS0011524 Camellia sinensis var. sinensis HOM05D005876 ORTHO05D007326 1.0e-24 118.2 269 32.0
Hma1.2p1_0350F.1_g132760 Hydrangea macrophylla HOM05D005876 ORTHO05D007326 1.0e-24 118.2 217 34.6
Sopen09g002270 Solanum pennellii HOM05D005876 ORTHO05D007326 1.8e-24 117.5 310 32.6
Cc11_g02990 Coffea canephora HOM05D005876 ORTHO05D007326 2.3e-24 117.1 299 31.4
Eucgr.D00282 Eucalyptus grandis HOM05D005876 ORTHO05D007326 2.3e-24 117.1 215 35.3
Glyma.11G012100 Glycine max HOM05D005876 ORTHO05D007326 5.1e-24 115.9 239 33.1
Atru.chr8.2559 Acer truncatum HOM05D005876 ORTHO05D007326 6.7e-24 115.5 216 35.6
Dinv37257 Davidia involucrata HOM05D005876 ORTHO05D007326 6.7e-24 115.5 257 31.1
Lalb_Chr01g0022971 Lupinus albus HOM05D005876 ORTHO05D007326 6.7e-24 115.5 236 33.1
C04p04270 Brassica napus HOM05D005876 ORTHO05D007326 8.8e-24 115.2 204 36.3
BolC4t22063H Brassica oleracea HOM05D005876 ORTHO05D007326 8.8e-24 115.2 204 36.3
LjContig00222g0022274 Lotus japonicus HOM05D005876 ORTHO05D007326 8.8e-24 115.2 257 31.5
Solyc09g007370.4 Solanum lycopersicum HOM05D005876 ORTHO05D007326 8.8e-24 115.2 310 31.9
Lj1g0007669 Lotus japonicus HOM05D005876 ORTHO05D007326 1.1e-23 114.8 257 31.5
THA.LOC104826952 Tarenaya hassleriana HOM05D005876 ORTHO05D007326 1.1e-23 114.8 245 31.0
TPR.G38017 Trifolium pratense HOM05D005876 ORTHO05D007326 1.1e-23 114.8 216 33.8
AT2G43190 Arabidopsis thaliana HOM05D005876 ORTHO05D007326 2.0e-23 114.0 215 33.5
QL03p054300 Quercus lobata HOM05D005876 ORTHO05D007326 3.3e-23 113.2 215 33.5
AL4G41850 Arabidopsis lyrata HOM05D005876 ORTHO05D007326 4.4e-23 112.8 215 33.5
Carub.0004s2566 Capsella rubella HOM05D005876 ORTHO05D007326 4.4e-23 112.8 199 34.7
CsaV3_3G035590 Cucumis sativus L. HOM05D005876 ORTHO05D007326 4.4e-23 112.8 213 32.4
Sed0002034 Sechium edule HOM05D005876 ORTHO05D007326 5.7e-23 112.5 212 33.5
TAR375G0626 Trochodendron aralioides HOM05D005876 ORTHO05D007326 5.7e-23 112.5 283 31.8
MD12G1123900 Malus domestica HOM05D005876 ORTHO05D007326 9.7e-23 111.7 275 29.1
Duzib093G1198 Durio zibethinus HOM05D005876 ORTHO05D007326 1.3e-22 111.3 251 33.1
ECA238G3410 Erigeron canadensis HOM05D005876 ORTHO05D007326 1.7e-22 110.9 237 34.6
Thhalv10001741m.g Eutrema salsugineum HOM05D005876 ORTHO05D007326 1.7e-22 110.9 213 33.8
Prupe.4G230000 Prunus persica HOM05D005876 ORTHO05D007326 1.7e-22 110.9 250 31.2
Sp4g25310 Schrenkiella parvula HOM05D005876 ORTHO05D007326 1.7e-22 110.9 201 34.8
CiPaw.09G179800 Carya illinoinensis HOM05D005876 ORTHO05D007326 2.8e-22 110.2 254 31.9
HPP92_015422 Vanilla planifolia HOM05D005876 ORTHO05D007326 2.8e-22 110.2 213 32.4
HPP92_026974 Vanilla planifolia HOM05D005876 ORTHO05D007326 2.8e-22 110.2 213 32.4
MELO3C009318.2 Cucumis melo HOM05D005876 ORTHO05D007326 3.7e-22 109.8 223 32.7
MBI19_g11838_MAGBIO Magnolia biondii HOM05D005876 ORTHO05D007326 3.7e-22 109.8 255 32.5
Manes.09G081419 Manihot esculenta HOM05D005876 ORTHO05D007326 3.7e-22 109.8 293 31.1
GSVIVG01025628001 Vitis vinifera HOM05D005876 ORTHO05D007326 3.7e-22 109.8 274 30.7
Thecc.05G054500 Theobroma cacao HOM05D005876 ORTHO05D007326 6.3e-22 109.0 250 31.6
EL10Ac7g17355 Beta vulgaris HOM05D005876 ORTHO05D007326 8.2e-22 108.6 240 33.8
ClCG10G020530 Citrullus lanatus HOM05D005876 ORTHO05D007326 8.2e-22 108.6 213 33.3
TAR633G1288 Trochodendron aralioides HOM05D005876 ORTHO05D007326 1.4e-21 107.8 233 34.8
Ciclev10012269m.g Citrus clementina HOM05D005876 ORTHO05D007326 2.4e-21 107.1 251 29.9
Gorai.002G249900 Gossypium raimondii HOM05D005876 ORTHO05D007326 2.4e-21 107.1 253 33.2
Gohir.A01G216800 Gossypium hirsutum HOM05D005876 ORTHO05D007326 3.1e-21 106.7 253 33.6
Nn2g10678 Nelumbo nucifera HOM05D005876 ORTHO05D007326 3.1e-21 106.7 261 33.0
Nitab4.5_0001763g0100 Nicotiana tabacum HOM05D005876 ORTHO05D007326 3.1e-21 106.7 242 31.4
MSTRG.5723 Avicennia marina HOM05D005876 ORTHO05D007326 4.1e-21 106.3 218 33.5
Migut.J00418 Erythranthe guttata HOM05D005876 ORTHO05D007326 4.1e-21 106.3 303 29.0
SalBow3G2410 Salvia bowleyana HOM05D005876 ORTHO05D007326 4.1e-21 106.3 207 32.4
SalBow3G3945 Salvia bowleyana HOM05D005876 ORTHO05D007326 5.3e-21 105.9 207 32.4
CDE05G1905 Ceratophyllum demersum HOM05D005876 ORTHO05D007326 9.1e-21 105.1 222 33.8
FAN02G3306 Fragaria x ananassa HOM05D005876 ORTHO05D007326 9.1e-21 105.1 250 31.2
Gohir.D01G205600 Gossypium hirsutum HOM05D005876 ORTHO05D007326 1.2e-20 104.8 253 33.6
Actinidia13103 Actinidia chinensis HOM05D005876 ORTHO05D007326 2.6e-20 103.6 212 31.6
Phvul.002G038100 Phaseolus vulgaris HOM05D005876 ORTHO05D007326 2.6e-20 103.6 182 36.3
Lsat_1_v5_gn_3_120281 Lactuca sativa HOM05D005876 ORTHO05D007326 7.7e-20 102.1 277 31.8
Aqoxy4G03207 Aquilegia oxysepala HOM05D005876 ORTHO05D007326 1.3e-19 101.3 186 33.3
Sc23g0005710 Simmondsia chinensis HOM05D005876 ORTHO05D007326 3.8e-19 99.8 192 34.9
Nitab4.5_0005274g0030 Nicotiana tabacum HOM05D005876 ORTHO05D007326 5.0e-19 99.4 217 32.3
FvH4_6g15400 Fragaria vesca HOM05D005876 ORTHO05D007326 6.5e-19 99.0 102 46.1
Cfa017510 Carpinus fangiana HOM05D000666 ORTHO05D001727 1.4e-18 97.8 225 32.0
Medtr5g007880 Medicago truncatula HOM05D005876 ORTHO05D007326 1.4e-18 97.8 99 47.5
unitig_32.g11040 Utricularia gibba HOM05D005876 ORTHO05D007326 5.5e-18 95.9 114 43.0
Sabra01G0024100 Salix brachista HOM05D001063 ORTHO05D000986 7.2e-18 95.5 250 30.4
RcHm_v2.0_Chr3g0468881 Rosa chinensis HOM05D005876 ORTHO05D007326 1.6e-17 94.4 274 27.0
Lj2C107T12 Lonicera japonica HOM05D005876 ORTHO05D007326 2.1e-17 94.0 189 32.8
FAN14G3435 Fragaria x ananassa HOM05D005876 ORTHO05D007326 7.9e-17 92.0 285 27.0
MD04G1104000 Malus domestica HOM05D005876 ORTHO05D007326 7.9e-17 92.0 256 29.3
SGA_v2.0_scaffold75G24879 Striga asiatica HOM05D005876 ORTHO05D007326 1.8e-16 90.9 237 29.1
Psat0s769g0080 Pisum sativum HOM05D005876 ORTHO05D007326 6.7e-16 89.0 260 29.6
TWI74G1051 Tripterygium wilfordii HOM05D005876 ORTHO05D007326 1.1e-15 88.2 279 26.9
Peaxi162Scf01604g00016 Petunia axillaris HOM05D005876 ORTHO05D007326 4.8e-14 82.8 127 36.2
Psat4g011240 Pisum sativum HOM05D005876 ORTHO05D007326 6.3e-14 82.4 98 40.8
arahy.Tifrunner.gnm1.ann1.09MUKR Arachis hypogaea HOM05D005876 ORTHO05D007326 8.2e-14 82.0 202 31.2
Zm00001eb270830 Zea mays HOM05D005876 ORTHO05D007326 8.2e-14 82.0 290 27.6
PSO063G0740 Papaver somniferum HOM05D005876 ORTHO05D007326 1.4e-13 81.3 157 33.8
Haze_20644 Corylus avellana HOM05D005876 ORTHO05D007326 1.8e-13 80.9 250 28.0
arahy.Tifrunner.gnm1.ann1.SSK647 Arachis hypogaea HOM05D005876 ORTHO05D007326 3.1e-13 80.1 202 31.2
CBR_g48398 Chara braunii HOM05D005876 ORTHO05D007326 5.3e-13 79.3 260 28.8
AUR62040047 Chenopodium quinoa HOM05D005876 ORTHO05D007326 2.0e-12 77.4 254 29.1
Gorai.004G066200 Gossypium raimondii HOM05D005876 ORTHO05D007326 2.6e-12 77.0 102 38.2
Peaxi162Scf00005g04511 Petunia axillaris HOM05D005876 ORTHO05D007326 4.5e-12 76.3 249 26.9
VMungo1215G0672 Vigna mungo HOM05D005876 ORTHO05D007326 4.5e-12 76.3 208 29.3
SHI12568 Sapria himalayana HOM05D005876 ORTHO05D007326 5.0e-11 72.8 182 32.4
Zm00001eb286610 Zea mays HOM05D005876 ORTHO05D007326 5.0e-11 72.8 108 35.2
FAN09G4005 Fragaria x ananassa HOM05D005876 ORTHO05D007326 6.5e-11 72.4 112 37.5
Ca_24451_v3 Cicer arietinum L. HOM05D005876 ORTHO05D007326 3.2e-10 70.1 94 39.4
PGSC0003DMG400004235 Solanum tuberosum HOM05D005876 ORTHO05D007326 2.7e-09 67.0 103 32.0
Dinv08367 Davidia involucrata HOM05D005876 ORTHO05D007326 1.0e-08 65.1 59 52.5
Dinv35712 Davidia involucrata HOM05D005876 ORTHO05D007326 1.0e-08 65.1 59 52.5
PGR083G2396 Punica granatum HOM05D005876 ORTHO05D007326 2.0e-07 60.8 160 30.0
Nitab4.5_0000669g0240 Nicotiana tabacum HOM05D005876 ORTHO05D007326 7.5e-07 58.9 188 29.3
Cpa.g.sc45.33 Carica papaya HOM05D005876 ORTHO05D007326 1.7e-06 57.8 196 26.0
Glyma.01G229300 Glycine max HOM05D005876 ORTHO05D007326 2.2e-06 57.4 117 31.6
Cfa025603 Carpinus fangiana HOM05D005876 ORTHO05D007326 6.3e-06 55.8 168 28.0


User provided reference genes

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