Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO278G0031 Selaginella moellendorffii HOM05D003836 ORTHO05D004556 1.4e-78 296.2 150 100.0
SMO200G0209 Selaginella moellendorffii HOM05D003836 ORTHO05D004556 1.5e-56 223.0 142 84.5
SMO358G0292 Selaginella moellendorffii HOM05D003836 ORTHO05D004556 6.4e-31 137.9 131 60.3
ATR0021G013 Amborella trichopoda HOM05D003836 ORTHO05D004556 1.1e-17 94.0 126 45.2
PSO063G7099 Papaver somniferum HOM05D003836 ORTHO05D004556 9.0e-17 90.9 147 42.2
Oeu036124.4 Olea europaea HOM05D003836 ORTHO05D004556 1.5e-16 90.1 100 50.0
Mapoly0019s0007 Marchantia polymorpha HOM05D003836 ORTHO05D004556 2.0e-16 89.7 152 40.8
Pp3c12_1050 Physcomitrium patens HOM05D003836 ORTHO05D004556 2.6e-16 89.4 149 43.0
Migut.E00502 Erythranthe guttata HOM05D003836 ORTHO05D004556 3.4e-16 89.0 147 39.5
PSO782G5172 Papaver somniferum HOM05D003836 ORTHO05D004556 4.5e-16 88.6 147 40.1
Aqoxy6G01037 Aquilegia oxysepala HOM05D003836 ORTHO05D004556 1.0e-15 87.4 147 40.8
Potri.010G103400 Populus trichocarpa HOM05D003836 ORTHO05D004556 1.3e-15 87.0 147 39.5
Atru.chr11.806 Acer truncatum HOM05D003836 ORTHO05D004556 2.2e-15 86.3 147 39.5
Dinv32673 Davidia involucrata HOM05D003836 ORTHO05D004556 2.2e-15 86.3 147 39.5
SalBow2G2298 Salvia bowleyana HOM05D003836 ORTHO05D004556 2.2e-15 86.3 105 51.4
Atru.chr7.2694 Acer truncatum HOM05D003836 ORTHO05D004556 2.9e-15 85.9 147 39.5
arahy.Tifrunner.gnm1.ann1.HCE13Z Arachis hypogaea HOM05D003836 ORTHO05D004556 2.9e-15 85.9 129 43.4
Duzib251G0897 Durio zibethinus HOM05D003836 ORTHO05D004556 2.9e-15 85.9 147 39.5
TPR.G32436 Trifolium pratense HOM05D003836 ORTHO05D004556 2.9e-15 85.9 130 45.4
MBI11_g36366_MAGBIO Magnolia biondii HOM05D003836 ORTHO05D004556 3.8e-15 85.5 100 48.0
Manes.17G086000 Manihot esculenta HOM05D003836 ORTHO05D004556 3.8e-15 85.5 147 38.8
Thecc.02G307000 Theobroma cacao HOM05D003836 ORTHO05D004556 3.8e-15 85.5 147 39.5
TWI74G0623 Tripterygium wilfordii HOM05D003836 ORTHO05D004556 5.0e-15 85.1 147 38.1
Peaxi162Scf00825g00424 Petunia axillaris HOM05D003836 ORTHO05D004556 6.5e-15 84.7 93 50.5
Ciclev10014689m.g Citrus clementina HOM05D003836 ORTHO05D004556 8.5e-15 84.3 147 38.8
Cc11_g06410 Coffea canephora HOM05D003836 ORTHO05D004556 8.5e-15 84.3 93 48.4
Manes.15G136900 Manihot esculenta HOM05D003836 ORTHO05D004556 8.5e-15 84.3 147 39.5
Nn3g18432 Nelumbo nucifera HOM05D003836 ORTHO05D004556 8.5e-15 84.3 147 38.1
Psat7g111040 Pisum sativum HOM05D003836 ORTHO05D004556 8.5e-15 84.3 149 40.9
SGA_v2.0_scaffold23G10153 Striga asiatica HOM05D003836 ORTHO05D004556 8.5e-15 84.3 105 47.6
Zm00001eb216180 Zea mays HOM05D003836 ORTHO05D004556 8.5e-15 84.3 147 38.8
Glyma.04G189300 Glycine max HOM05D003836 ORTHO05D004556 1.1e-14 84.0 147 40.1
TAR374G0617 Trochodendron aralioides HOM05D003836 ORTHO05D004556 1.4e-14 83.6 147 40.1
CsaV3_7G022080 Cucumis sativus L. HOM05D003836 ORTHO05D004556 1.9e-14 83.2 147 39.5
PGR142G3191 Punica granatum HOM05D003836 ORTHO05D004556 1.9e-14 83.2 147 38.8
Sopen06g017410 Solanum pennellii HOM05D003836 ORTHO05D004556 1.9e-14 83.2 108 47.2
CiPaw.05G187900 Carya illinoinensis HOM05D003836 ORTHO05D004556 2.5e-14 82.8 147 39.5
COL.COLO4_27608 Corchorus olitorius HOM05D003836 ORTHO05D004556 2.5e-14 82.8 105 46.7
Lj1g0024673 Lotus japonicus HOM05D003836 ORTHO05D004556 2.5e-14 82.8 147 38.8
SHI04351 Sapria himalayana HOM05D003836 ORTHO05D004556 2.5e-14 82.8 100 47.0
TAR622G1236 Trochodendron aralioides HOM05D003836 ORTHO05D004556 2.5e-14 82.8 147 39.5
GSVIVG01011621001 Vitis vinifera HOM05D003836 ORTHO05D004556 2.5e-14 82.8 151 37.7
Ca_16122_v3 Cicer arietinum L. HOM05D003836 ORTHO05D004556 3.2e-14 82.4 147 38.8
Glyma.06G176300 Glycine max HOM05D003836 ORTHO05D004556 3.2e-14 82.4 147 39.5
Gohir.A13G027900 Gossypium hirsutum HOM05D003836 ORTHO05D004556 3.2e-14 82.4 147 38.1
TPR.G35600 Trifolium pratense HOM05D003836 ORTHO05D004556 3.2e-14 82.4 93 49.5
Glyma.07G191900 Glycine max HOM05D003836 ORTHO05D004556 4.2e-14 82.0 149 40.3
Hma1.2p1_2859F.1_g329510 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 4.2e-14 82.0 147 37.4
VMungo0251G2034 Vigna mungo HOM05D003836 ORTHO05D004556 4.2e-14 82.0 100 50.0
EL10Ac8g19453 Beta vulgaris HOM05D003836 ORTHO05D004556 5.5e-14 81.6 100 50.0
Dinv02294 Davidia involucrata HOM05D003836 ORTHO05D004556 5.5e-14 81.6 93 48.4
Phvul.009G172600 Phaseolus vulgaris HOM05D003836 ORTHO05D004556 5.5e-14 81.6 147 38.8
MD16G1015700 Malus domestica HOM05D003836 ORTHO05D004556 7.2e-14 81.3 93 48.4
CARHR060610 Cardamine hirsuta HOM05D003836 ORTHO05D004556 9.3e-14 80.9 147 38.8
Eucgr.G02079 Eucalyptus grandis HOM05D003836 ORTHO05D004556 9.3e-14 80.9 147 36.7
Gohir.D13G026700 Gossypium hirsutum HOM05D003836 ORTHO05D004556 9.3e-14 80.9 147 38.1
Gorai.013G030000 Gossypium raimondii HOM05D003836 ORTHO05D004556 9.3e-14 80.9 147 38.1
Nn4g24475 Nelumbo nucifera HOM05D003836 ORTHO05D004556 9.3e-14 80.9 147 38.1
Prupe.1G335900 Prunus persica HOM05D003836 ORTHO05D004556 9.3e-14 80.9 147 38.8
MELO3C013236.2 Cucumis melo HOM05D003836 ORTHO05D004556 1.2e-13 80.5 105 46.7
Medtr3g076570 Medicago truncatula HOM05D003836 ORTHO05D004556 1.2e-13 80.5 93 49.5
Medtr4g090465 Medicago truncatula HOM05D003836 ORTHO05D004556 1.2e-13 80.5 100 49.0
Os03g0715400 Oryza sativa ssp. japonica HOM05D003836 ORTHO05D004556 1.2e-13 80.5 147 38.1
arahy.Tifrunner.gnm1.ann1.FHB42U Arachis hypogaea HOM05D003836 ORTHO05D004556 1.6e-13 80.1 158 37.3
HanXRQChr15g0473551 Helianthus annuus HOM05D003836 ORTHO05D004556 1.6e-13 80.1 93 48.4
FvH4_4g33240 Fragaria vesca HOM05D003836 ORTHO05D004556 2.1e-13 79.7 148 38.5
Gohir.A12G154400 Gossypium hirsutum HOM05D003836 ORTHO05D004556 2.1e-13 79.7 147 37.4
Gohir.D12G157600 Gossypium hirsutum HOM05D003836 ORTHO05D004556 2.1e-13 79.7 147 37.4
Gorai.008G170400 Gossypium raimondii HOM05D003836 ORTHO05D004556 2.1e-13 79.7 147 37.4
Lsat_1_v5_gn_3_104360 Lactuca sativa HOM05D003836 ORTHO05D004556 2.1e-13 79.7 93 48.4
Psat5g116920 Pisum sativum HOM05D003836 ORTHO05D004556 2.1e-13 79.7 93 48.4
AT1G67960 Arabidopsis thaliana HOM05D003836 ORTHO05D004556 3.6e-13 79.0 147 38.8
CANSAT78G2203 Cannabis sativa HOM05D003836 ORTHO05D004556 3.6e-13 79.0 147 36.1
Cfa015051 Carpinus fangiana HOM05D003836 ORTHO05D004556 3.6e-13 79.0 147 37.4
RcHm_v2.0_Chr4g0442391 Rosa chinensis HOM05D003836 ORTHO05D004556 3.6e-13 79.0 93 49.5
ClCG11G007570 Citrullus lanatus HOM05D003836 ORTHO05D004556 4.6e-13 78.6 143 39.9
FAN22G0514 Fragaria x ananassa HOM05D003836 ORTHO05D004556 4.6e-13 78.6 94 48.9
MD13G1017500 Malus domestica HOM05D003836 ORTHO05D004556 6.1e-13 78.2 110 42.7
AL2G26960 Arabidopsis lyrata HOM05D003836 ORTHO05D004556 7.9e-13 77.8 147 38.1
Carub.0002s1445 Capsella rubella HOM05D003836 ORTHO05D004556 7.9e-13 77.8 147 38.1
DCAR_023556 Daucus carota HOM05D003836 ORTHO05D004556 7.9e-13 77.8 105 44.8
Lalb_Chr11g0070001 Lupinus albus HOM05D003836 ORTHO05D004556 7.9e-13 77.8 93 46.2
Lalb_Chr23g0273371 Lupinus albus HOM05D003836 ORTHO05D004556 7.9e-13 77.8 93 47.3
Sp5g22940 Schrenkiella parvula HOM05D003836 ORTHO05D004556 7.9e-13 77.8 147 38.1
Sed0017171 Sechium edule HOM05D003836 ORTHO05D004556 7.9e-13 77.8 147 38.1
VMungo1309G0617 Vigna mungo HOM05D003836 ORTHO05D004556 7.9e-13 77.8 93 47.3
arahy.Tifrunner.gnm1.ann1.THT645 Arachis hypogaea HOM05D003836 ORTHO05D004556 1.4e-12 77.0 159 36.5
A07p34480 Brassica napus HOM05D003836 ORTHO05D004556 1.4e-12 77.0 147 38.8
ECA246G1487 Erigeron canadensis HOM05D003836 ORTHO05D004556 1.4e-12 77.0 147 36.1
FAN12G1258 Fragaria x ananassa HOM05D003836 ORTHO05D004556 1.4e-12 77.0 94 47.9
FAN17G2261 Fragaria x ananassa HOM05D003836 ORTHO05D004556 1.4e-12 77.0 94 47.9
Glyma.13G184600 Glycine max HOM05D003836 ORTHO05D004556 1.4e-12 77.0 93 48.4
FAN07G2679 Fragaria x ananassa HOM05D003836 ORTHO05D004556 1.8e-12 76.6 94 47.9
Haze_10840 Corylus avellana HOM05D003836 ORTHO05D004556 2.3e-12 76.3 93 46.2
Thhalv10018303m.g Eutrema salsugineum HOM05D003836 ORTHO05D004556 2.3e-12 76.3 100 46.0
C01p04020 Brassica napus HOM05D003836 ORTHO05D004556 5.1e-12 75.1 100 46.0
Ah.02g131240 Amaranthus hybridus HOM05D003836 ORTHO05D004556 6.7e-12 74.7 100 47.0
BolC6t39223H Brassica oleracea HOM05D003836 ORTHO05D004556 8.8e-12 74.3 93 45.2
Nitab4.5_0001516g0010 Nicotiana tabacum HOM05D003836 ORTHO05D004556 2.5e-11 72.8 129 38.8
Cpa.g.sc2.157 Carica papaya HOM05D003836 ORTHO05D004556 5.7e-11 71.6 105 42.9
Aa31sc536G20 Aethionema arabicum HOM05D003836 ORTHO05D004556 6.3e-10 68.2 124 41.1
QL03p038287 Quercus lobata HOM05D003836 ORTHO05D004556 1.1e-09 67.4 128 34.4
Sc10g0004870 Simmondsia chinensis HOM05D003836 ORTHO05D004556 1.4e-09 67.0 105 41.9
Sabra10G0076000 Salix brachista HOM05D003836 ORTHO05D004556 1.8e-09 66.6 93 44.1
Gorai.013G150200 Gossypium raimondii HOM05D003836 ORTHO05D004556 9.1e-09 64.3 81 44.4
AagrBONN_evm.TU.Sc2ySwM_228.1822 Anthoceros agrestis HOM05D003836 ORTHO05D004556 2.0e-08 63.2 138 35.5
DCAR_030293 Daucus carota HOM05D003836 ORTHO05D004556 2.0e-08 63.2 85 43.5
unitig_8.g4015 Utricularia gibba HOM05D003836 ORTHO05D004556 2.6e-08 62.8 79 44.3
Lj6A734G74 Lonicera japonica HOM05D003836 ORTHO05D004556 7.7e-08 61.2 103 40.8
arahy.Tifrunner.gnm1.ann1.MA62LX Arachis hypogaea HOM05D003836 ORTHO05D004556 1.3e-07 60.5 80 43.8
BcaB03g15387 Brassica carinata HOM05D003836 ORTHO05D004556 3.2e-06 55.8 98 39.8


User provided reference genes

Program Settings