Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO270G0104 Selaginella moellendorffii HOM05D006573 ORTHO05D008073 7.1e-195 683.7 336 100.0
Mapoly0111s0023 Marchantia polymorpha HOM05D006573 ORTHO05D008073 1.8e-134 483.0 335 68.1
Thecc.05G259800 Theobroma cacao HOM05D006573 ORTHO05D008073 1.3e-132 476.9 335 67.5
arahy.Tifrunner.gnm1.ann1.ZGZX3T Arachis hypogaea HOM05D006573 ORTHO05D008073 1.7e-132 476.5 333 68.5
CANSAT21G0678 Cannabis sativa HOM05D006573 ORTHO05D008073 2.9e-132 475.7 335 66.9
Duzib177G1122 Durio zibethinus HOM05D006573 ORTHO05D008073 5.0e-132 474.9 335 68.1
Gohir.D11G250400 Gossypium hirsutum HOM05D006573 ORTHO05D008073 5.0e-132 474.9 335 67.5
Gorai.007G268500 Gossypium raimondii HOM05D006573 ORTHO05D008073 5.0e-132 474.9 335 67.5
arahy.Tifrunner.gnm1.ann1.L0KK3Q Arachis hypogaea HOM05D006573 ORTHO05D008073 2.5e-131 472.6 331 67.7
TPR.G4727 Trifolium pratense HOM05D006573 ORTHO05D008073 3.2e-131 472.2 339 64.3
GSVIVG01026405001 Vitis vinifera HOM05D006573 ORTHO05D008073 3.2e-131 472.2 332 67.5
Nn1g07946 Nelumbo nucifera HOM05D006573 ORTHO05D008073 4.2e-131 471.9 332 67.2
FAN05G3303 Fragaria x ananassa HOM05D006573 ORTHO05D008073 5.5e-131 471.5 335 66.0
Potri.013G053100 Populus trichocarpa HOM05D006573 ORTHO05D008073 5.5e-131 471.5 335 66.6
FAN05G2122 Fragaria x ananassa HOM05D006573 ORTHO05D008073 7.2e-131 471.1 336 65.8
Eucgr.B02180 Eucalyptus grandis HOM05D006573 ORTHO05D008073 1.6e-130 469.9 335 66.6
Prupe.6G356100 Prunus persica HOM05D006573 ORTHO05D008073 1.6e-130 469.9 335 66.3
CSS0006565 Camellia sinensis var. sinensis HOM05D006573 ORTHO05D008073 2.7e-130 469.2 329 67.8
MD12G1255200 Malus domestica HOM05D006573 ORTHO05D008073 2.7e-130 469.2 332 66.9
Nitab4.5_0012098g0010 Nicotiana tabacum HOM05D006573 ORTHO05D008073 4.7e-130 468.4 331 66.5
Sc09g0001730 Simmondsia chinensis HOM05D006573 ORTHO05D008073 4.7e-130 468.4 329 68.1
THA.LOC104805797 Tarenaya hassleriana HOM05D006573 ORTHO05D008073 4.7e-130 468.4 335 66.9
VMungo0540G0667 Vigna mungo HOM05D006573 ORTHO05D008073 8.0e-130 467.6 335 65.7
Dinv19279 Davidia involucrata HOM05D006573 ORTHO05D008073 1.0e-129 467.2 331 67.1
Nitab4.5_0000344g0030 Nicotiana tabacum HOM05D006573 ORTHO05D008073 1.0e-129 467.2 331 66.2
FAN09G4254 Fragaria x ananassa HOM05D006573 ORTHO05D008073 1.4e-129 466.8 339 65.2
PSO017G7064 Papaver somniferum HOM05D006573 ORTHO05D008073 1.4e-129 466.8 339 65.8
PSO063G7541 Papaver somniferum HOM05D006573 ORTHO05D008073 1.8e-129 466.5 339 65.8
Cpa.g.sc51.78 Carica papaya HOM05D006573 ORTHO05D008073 2.3e-129 466.1 335 66.0
TAR362G0441 Trochodendron aralioides HOM05D006573 ORTHO05D008073 2.3e-129 466.1 335 66.3
AUR62005294 Chenopodium quinoa HOM05D006573 ORTHO05D008073 3.0e-129 465.7 335 66.3
FAN14G5930 Fragaria x ananassa HOM05D006573 ORTHO05D008073 3.9e-129 465.3 339 65.2
Glyma.19G251000 Glycine max HOM05D006573 ORTHO05D008073 5.2e-129 464.9 335 65.1
Cc09_g03200 Coffea canephora HOM05D006573 ORTHO05D008073 8.8e-129 464.2 335 65.1
FvH4_6g01130 Fragaria vesca HOM05D006573 ORTHO05D008073 8.8e-129 464.2 339 64.9
Actinidia06814 Actinidia chinensis HOM05D006573 ORTHO05D008073 1.1e-128 463.8 335 66.3
Thhalv10007587m.g Eutrema salsugineum HOM05D006573 ORTHO05D008073 1.1e-128 463.8 339 64.3
Glyma.03G253500 Glycine max HOM05D006573 ORTHO05D008073 1.1e-128 463.8 335 65.4
Medtr7g116630 Medicago truncatula HOM05D006573 ORTHO05D008073 1.1e-128 463.8 339 62.5
SGA_v2.0_scaffold13G06342 Striga asiatica HOM05D006573 ORTHO05D008073 1.1e-128 463.8 331 65.3
CAN.G29.20 Capsicum annuum HOM05D006573 ORTHO05D008073 1.5e-128 463.4 331 65.3
ATR0069G016 Amborella trichopoda HOM05D006573 ORTHO05D008073 2.0e-128 463.0 335 66.3
Hma1.2p1_0123F.1_g058030 Hydrangea macrophylla HOM05D006573 ORTHO05D008073 2.0e-128 463.0 335 65.7
PGSC0003DMG400010688 Solanum tuberosum HOM05D006573 ORTHO05D008073 2.0e-128 463.0 331 65.0
Manes.09G144600 Manihot esculenta HOM05D006573 ORTHO05D008073 2.6e-128 462.6 335 64.8
AagrBONN_evm.TU.Sc2ySwM_228.1660 Anthoceros agrestis HOM05D006573 ORTHO05D008073 3.3e-128 462.2 343 64.4
RcHm_v2.0_Chr3g0448661 Rosa chinensis HOM05D006573 ORTHO05D008073 3.3e-128 462.2 335 64.8
Ciclev10019925m.g Citrus clementina HOM05D006573 ORTHO05D008073 7.4e-128 461.1 335 65.4
BolC5t29425H Brassica oleracea HOM05D006573 ORTHO05D008073 9.7e-128 460.7 339 63.4
Pp3c3_13220 Physcomitrium patens HOM05D006573 ORTHO05D008073 9.7e-128 460.7 371 60.4
Sopen04g022050 Solanum pennellii HOM05D006573 ORTHO05D008073 9.7e-128 460.7 331 64.7
MBI11_g07442_MAGBIO Magnolia biondii HOM05D006573 ORTHO05D008073 1.3e-127 460.3 335 64.8
Atru.chr2.1254 Acer truncatum HOM05D006573 ORTHO05D008073 2.8e-127 459.1 332 66.0
C05p06650 Brassica napus HOM05D006573 ORTHO05D008073 2.8e-127 459.1 339 63.1
AUR62000660 Chenopodium quinoa HOM05D006573 ORTHO05D008073 3.7e-127 458.8 335 65.1
Solyc04g050930.3 Solanum lycopersicum HOM05D006573 ORTHO05D008073 3.7e-127 458.8 331 64.4
Lalb_Chr18g0044221 Lupinus albus HOM05D006573 ORTHO05D008073 4.8e-127 458.4 335 63.6
Phvul.006G108200 Phaseolus vulgaris HOM05D006573 ORTHO05D008073 4.8e-127 458.4 335 65.1
SEGI_03231 Sequoiadendron giganteum HOM05D006573 ORTHO05D008073 4.8e-127 458.4 335 64.2
Ca_09476_v3 Cicer arietinum L. HOM05D006573 ORTHO05D008073 6.3e-127 458.0 335 63.6
Sabra13G0048100 Salix brachista HOM05D006573 ORTHO05D008073 6.3e-127 458.0 353 63.2
BraA06t23762Z Brassica rapa HOM05D006573 ORTHO05D008073 8.2e-127 457.6 339 62.8
Haze_04495 Corylus avellana HOM05D006573 ORTHO05D008073 8.2e-127 457.6 335 64.2
CARHR008450 Cardamine hirsuta HOM05D006573 ORTHO05D008073 1.1e-126 457.2 339 63.1
Lj1g0015745 Lotus japonicus HOM05D006573 ORTHO05D008073 1.1e-126 457.2 335 65.1
A06p05540 Brassica napus HOM05D006573 ORTHO05D008073 1.8e-126 456.4 339 62.8
Migut.F02066 Erythranthe guttata HOM05D006573 ORTHO05D008073 1.8e-126 456.4 335 65.7
EL10Ac4g09803 Beta vulgaris HOM05D006573 ORTHO05D008073 2.4e-126 456.1 331 65.0
Gohir.A11G241000 Gossypium hirsutum HOM05D006573 ORTHO05D008073 2.4e-126 456.1 335 65.7
Aa31sc20G120 Aethionema arabicum HOM05D006573 ORTHO05D008073 3.1e-126 455.7 335 63.0
Sp1g07210 Schrenkiella parvula HOM05D006573 ORTHO05D008073 5.3e-126 454.9 339 63.1
HPP92_020222 Vanilla planifolia HOM05D001545 ORTHO05D001600 1.6e-125 453.4 335 63.0
AL1G18980 Arabidopsis lyrata HOM05D006573 ORTHO05D008073 5.9e-125 451.4 340 62.1
Oeu054601.1 Olea europaea HOM05D006573 ORTHO05D008073 7.7e-125 451.1 334 65.3
Aqoxy2G03898 Aquilegia oxysepala HOM05D006573 ORTHO05D008073 1.1e-123 447.2 331 64.0
MSTRG.8177 Avicennia marina HOM05D006573 ORTHO05D008073 1.9e-123 446.4 335 64.2
CDE05G0683 Ceratophyllum demersum HOM05D006573 ORTHO05D008073 1.9e-123 446.4 335 62.1
Peaxi162Scf01011g00215 Petunia axillaris HOM05D006573 ORTHO05D008073 4.2e-123 445.3 329 64.7
AT1G08550 Arabidopsis thaliana HOM05D006573 ORTHO05D008073 8.0e-122 441.0 340 61.2
Psat3g005000 Pisum sativum HOM05D006573 ORTHO05D008073 1.4e-121 440.3 331 61.3
HanXRQChr13g0406621 Helianthus annuus HOM05D006573 ORTHO05D008073 1.8e-121 439.9 335 60.9
Zm00001eb085840 Zea mays HOM05D006573 ORTHO05D008073 2.3e-121 439.5 335 62.1
Carub.0001s0791 Capsella rubella HOM05D006573 ORTHO05D008073 1.2e-120 437.2 340 60.6
TWI34G1215 Tripterygium wilfordii HOM05D006573 ORTHO05D008073 1.5e-120 436.8 328 62.5
Lj2A407T38 Lonicera japonica HOM05D006573 ORTHO05D008073 1.3e-119 433.7 348 60.3
ECA248G2645 Erigeron canadensis HOM05D006573 ORTHO05D008073 1.1e-118 430.6 352 58.8
Hund07152 Selenicereus undatus HOM05D006573 ORTHO05D008073 2.4e-118 429.5 331 62.5
COL.COLO4_20557 Corchorus olitorius HOM05D006573 ORTHO05D008073 3.1e-118 429.1 281 70.5
BcaB07g34098 Brassica carinata HOM05D006573 ORTHO05D008073 9.1e-118 427.6 339 60.8
CSS0039030 Camellia sinensis var. sinensis HOM05D006573 ORTHO05D008073 4.5e-117 425.2 329 62.6
CiPaw.07G075700 Carya illinoinensis HOM05D006573 ORTHO05D008073 2.2e-116 422.9 335 59.7
ClCG11G010060 Citrullus lanatus HOM05D006573 ORTHO05D008073 5.2e-113 411.8 259 71.4
MELO3C008677.2 Cucumis melo HOM05D006573 ORTHO05D008073 5.2e-113 411.8 262 70.2
CsaV3_2G010250 Cucumis sativus L. HOM05D006573 ORTHO05D008073 5.2e-113 411.8 262 70.6
Lsat_1_v5_gn_7_62281 Lactuca sativa HOM05D006573 ORTHO05D008073 1.5e-112 410.2 335 58.8
SalBow1G0293 Salvia bowleyana HOM05D006573 ORTHO05D008073 1.5e-112 410.2 332 59.3
DCAR_013654 Daucus carota HOM05D006573 ORTHO05D008073 2.0e-112 409.8 365 56.2
CBR_g38554 Chara braunii HOM05D006573 ORTHO05D008073 3.4e-112 409.1 333 59.2
SalBow1G2715 Salvia bowleyana HOM05D006573 ORTHO05D008073 4.4e-112 408.7 332 59.3
Sed0012720 Sechium edule HOM05D006573 ORTHO05D008073 9.8e-112 407.5 346 57.5
Lj2A405T39 Lonicera japonica HOM05D006573 ORTHO05D008073 1.3e-111 407.1 335 58.2
Rhsim10G0138000 Rhododendron simsii HOM05D006573 ORTHO05D008073 1.7e-108 396.7 303 62.4
Ah.06g188810 Amaranthus hybridus HOM05D006573 ORTHO05D008073 1.9e-107 393.3 335 58.2
vmacro12852 Vaccinium macrocarpon HOM05D006573 ORTHO05D008073 1.9e-107 393.3 424 48.6
SEGI_19143 Sequoiadendron giganteum HOM05D006573 ORTHO05D008073 9.8e-104 380.9 261 63.6
CDE05G0621 Ceratophyllum demersum HOM05D006573 ORTHO05D008073 4.6e-85 318.9 201 69.7
Os04g0379700 Oryza sativa ssp. japonica HOM05D006573 ORTHO05D008073 1.4e-78 297.4 244 58.2
SMO297G0027 Selaginella moellendorffii HOM05D006573 ORTHO05D008073 7.8e-77 291.6 205 62.9
SMO334G0031 Selaginella moellendorffii HOM05D006573 ORTHO05D008073 2.3e-76 290.0 205 61.5
SMO297G0014 Selaginella moellendorffii HOM05D006573 ORTHO05D008073 1.9e-75 287.0 205 62.0
SMO270G0143 Selaginella moellendorffii HOM05D006573 ORTHO05D008073 4.3e-75 285.8 205 60.5
unitig_46.g17980 Utricularia gibba HOM05D006573 ORTHO05D008073 7.6e-72 275.0 165 74.5
MCO16G084 Micromonas commoda HOM05D006573 ORTHO05D008073 2.1e-69 266.9 272 47.8
Hma1.2p1_0123F.1_g058020 Hydrangea macrophylla HOM05D006573 ORTHO05D008073 1.3e-68 264.2 163 71.2
PRCOL_00001224 Prasinoderma coloniale HOM05D006573 ORTHO05D008073 9.0e-65 251.5 314 41.7
Lj2C408T2 Lonicera japonica HOM05D006573 ORTHO05D008073 1.3e-60 237.7 328 43.3
PGSC0003DMG400010690 Solanum tuberosum HOM05D006573 ORTHO05D008073 3.0e-60 236.5 230 50.0
PGSC0003DMG400020993 Solanum tuberosum HOM05D006573 ORTHO05D008073 2.7e-45 186.8 210 46.2
SMO266G0012 Selaginella moellendorffii HOM05D006573 ORTHO05D008073 2.4e-33 147.1 98 63.3
unitig_46.g17981 Utricularia gibba HOM05D006573 ORTHO05D008073 1.8e-28 131.0 141 51.8


User provided reference genes

Program Settings