Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO266G0012 Selaginella moellendorffii HOM05D006573 ORTHO05D008073 1.4e-55 219.2 98 100.0
SMO297G0027 Selaginella moellendorffii HOM05D006573 ORTHO05D008073 1.9e-55 218.8 98 99.0
SMO334G0031 Selaginella moellendorffii HOM05D006573 ORTHO05D008073 2.3e-53 211.8 98 94.9
SMO297G0014 Selaginella moellendorffii HOM05D006573 ORTHO05D008073 3.0e-53 211.5 98 94.9
SMO270G0143 Selaginella moellendorffii HOM05D006573 ORTHO05D008073 2.1e-51 205.3 98 91.8
Psat3g005000 Pisum sativum HOM05D006573 ORTHO05D008073 2.3e-37 158.7 98 64.3
Medtr7g116630 Medicago truncatula HOM05D006573 ORTHO05D008073 5.1e-37 157.5 98 62.2
SEGI_03231 Sequoiadendron giganteum HOM05D006573 ORTHO05D008073 5.1e-37 157.5 98 66.3
Ciclev10019925m.g Citrus clementina HOM05D006573 ORTHO05D008073 8.8e-37 156.8 98 66.3
Solyc04g050930.3 Solanum lycopersicum HOM05D006573 ORTHO05D008073 1.1e-36 156.4 98 65.3
CAN.G29.20 Capsicum annuum HOM05D006573 ORTHO05D008073 1.5e-36 156.0 98 64.3
Sopen04g022050 Solanum pennellii HOM05D006573 ORTHO05D008073 1.5e-36 156.0 98 65.3
ECA248G2645 Erigeron canadensis HOM05D006573 ORTHO05D008073 2.5e-36 155.2 98 65.3
GSVIVG01026405001 Vitis vinifera HOM05D006573 ORTHO05D008073 2.5e-36 155.2 98 63.3
PGSC0003DMG400010688 Solanum tuberosum HOM05D006573 ORTHO05D008073 3.3e-36 154.8 98 64.3
Phvul.006G108200 Phaseolus vulgaris HOM05D006573 ORTHO05D008073 5.7e-36 154.1 98 65.3
TPR.G4727 Trifolium pratense HOM05D006573 ORTHO05D008073 5.7e-36 154.1 98 60.2
Actinidia06814 Actinidia chinensis HOM05D006573 ORTHO05D008073 7.4e-36 153.7 98 62.2
MSTRG.8177 Avicennia marina HOM05D006573 ORTHO05D008073 7.4e-36 153.7 98 64.3
EL10Ac4g09803 Beta vulgaris HOM05D006573 ORTHO05D008073 7.4e-36 153.7 98 63.3
CSS0006565 Camellia sinensis var. sinensis HOM05D006573 ORTHO05D008073 7.4e-36 153.7 98 64.3
TAR362G0441 Trochodendron aralioides HOM05D006573 ORTHO05D008073 7.4e-36 153.7 98 64.3
CANSAT21G0678 Cannabis sativa HOM05D006573 ORTHO05D008073 9.7e-36 153.3 98 63.3
MD12G1255200 Malus domestica HOM05D006573 ORTHO05D008073 9.7e-36 153.3 98 63.3
Prupe.6G356100 Prunus persica HOM05D006573 ORTHO05D008073 9.7e-36 153.3 98 62.2
Nn1g07946 Nelumbo nucifera HOM05D006573 ORTHO05D008073 1.3e-35 152.9 98 64.3
Pp3c3_13220 Physcomitrium patens HOM05D006573 ORTHO05D008073 1.3e-35 152.9 98 63.3
Cc09_g03200 Coffea canephora HOM05D006573 ORTHO05D008073 1.7e-35 152.5 98 64.3
COL.COLO4_20557 Corchorus olitorius HOM05D006573 ORTHO05D008073 1.7e-35 152.5 98 64.3
Glyma.03G253500 Glycine max HOM05D006573 ORTHO05D008073 1.7e-35 152.5 98 64.3
Oeu054601.1 Olea europaea HOM05D006573 ORTHO05D008073 1.7e-35 152.5 98 64.3
VMungo0540G0667 Vigna mungo HOM05D006573 ORTHO05D008073 1.7e-35 152.5 98 64.3
Aqoxy2G03898 Aquilegia oxysepala HOM05D006573 ORTHO05D008073 2.2e-35 152.1 98 62.2
Gohir.D11G250400 Gossypium hirsutum HOM05D006573 ORTHO05D008073 2.2e-35 152.1 98 64.3
Gorai.007G268500 Gossypium raimondii HOM05D006573 ORTHO05D008073 2.2e-35 152.1 98 64.3
SEGI_19143 Sequoiadendron giganteum HOM05D006573 ORTHO05D008073 2.2e-35 152.1 98 63.3
Haze_04495 Corylus avellana HOM05D006573 ORTHO05D008073 2.8e-35 151.8 98 63.3
CsaV3_2G010250 Cucumis sativus L. HOM05D006573 ORTHO05D008073 2.8e-35 151.8 98 62.2
Eucgr.B02180 Eucalyptus grandis HOM05D006573 ORTHO05D008073 2.8e-35 151.8 98 63.3
HanXRQChr13g0406621 Helianthus annuus HOM05D006573 ORTHO05D008073 2.8e-35 151.8 98 64.3
Nitab4.5_0000344g0030 Nicotiana tabacum HOM05D006573 ORTHO05D008073 2.8e-35 151.8 98 62.2
Nitab4.5_0012098g0010 Nicotiana tabacum HOM05D006573 ORTHO05D008073 2.8e-35 151.8 98 62.2
THA.LOC104805797 Tarenaya hassleriana HOM05D006573 ORTHO05D008073 2.8e-35 151.8 98 63.3
Ca_09476_v3 Cicer arietinum L. HOM05D006573 ORTHO05D008073 3.7e-35 151.4 98 60.2
FAN05G2122 Fragaria x ananassa HOM05D006573 ORTHO05D008073 3.7e-35 151.4 98 61.2
FAN05G3303 Fragaria x ananassa HOM05D006573 ORTHO05D008073 3.7e-35 151.4 98 61.2
Sed0012720 Sechium edule HOM05D006573 ORTHO05D008073 3.7e-35 151.4 98 62.2
Sc09g0001730 Simmondsia chinensis HOM05D006573 ORTHO05D008073 3.7e-35 151.4 98 63.3
FvH4_6g01130 Fragaria vesca HOM05D006573 ORTHO05D008073 4.8e-35 151.0 98 61.2
FAN14G5930 Fragaria x ananassa HOM05D006573 ORTHO05D008073 4.8e-35 151.0 98 61.2
MBI11_g07442_MAGBIO Magnolia biondii HOM05D006573 ORTHO05D008073 4.8e-35 151.0 98 65.3
AUR62000660 Chenopodium quinoa HOM05D006573 ORTHO05D008073 6.3e-35 150.6 98 62.2
AUR62005294 Chenopodium quinoa HOM05D006573 ORTHO05D008073 6.3e-35 150.6 98 62.2
Gohir.A11G241000 Gossypium hirsutum HOM05D006573 ORTHO05D008073 6.3e-35 150.6 98 63.3
SalBow1G2715 Salvia bowleyana HOM05D006573 ORTHO05D008073 6.3e-35 150.6 98 63.3
Hund07152 Selenicereus undatus HOM05D006573 ORTHO05D008073 6.3e-35 150.6 98 63.3
AagrBONN_evm.TU.Sc2ySwM_228.1660 Anthoceros agrestis HOM05D006573 ORTHO05D008073 8.2e-35 150.2 98 63.3
Lj1g0015745 Lotus japonicus HOM05D006573 ORTHO05D008073 8.2e-35 150.2 98 63.3
Aa31sc20G120 Aethionema arabicum HOM05D006573 ORTHO05D008073 1.1e-34 149.8 98 61.2
Migut.F02066 Erythranthe guttata HOM05D006573 ORTHO05D008073 1.1e-34 149.8 98 61.2
PSO017G7064 Papaver somniferum HOM05D006573 ORTHO05D008073 1.1e-34 149.8 98 62.2
RcHm_v2.0_Chr3g0448661 Rosa chinensis HOM05D006573 ORTHO05D008073 1.1e-34 149.8 98 61.2
Hma1.2p1_0123F.1_g058030 Hydrangea macrophylla HOM05D006573 ORTHO05D008073 1.4e-34 149.4 98 63.3
PSO063G7541 Papaver somniferum HOM05D006573 ORTHO05D008073 1.4e-34 149.4 98 62.2
Potri.013G053100 Populus trichocarpa HOM05D006573 ORTHO05D008073 1.4e-34 149.4 98 62.2
Rhsim10G0138000 Rhododendron simsii HOM05D006573 ORTHO05D008073 1.4e-34 149.4 98 63.3
Sabra13G0048100 Salix brachista HOM05D006573 ORTHO05D008073 1.4e-34 149.4 98 62.2
TWI34G1215 Tripterygium wilfordii HOM05D006573 ORTHO05D008073 1.8e-34 149.1 98 61.2
CARHR008450 Cardamine hirsuta HOM05D006573 ORTHO05D008073 2.4e-34 148.7 98 62.2
Dinv19279 Davidia involucrata HOM05D006573 ORTHO05D008073 2.4e-34 148.7 98 60.2
ClCG11G010060 Citrullus lanatus HOM05D006573 ORTHO05D008073 3.1e-34 148.3 98 60.2
Mapoly0111s0023 Marchantia polymorpha HOM05D006573 ORTHO05D008073 3.1e-34 148.3 98 61.2
FAN09G4254 Fragaria x ananassa HOM05D006573 ORTHO05D008073 4.1e-34 147.9 98 59.2
Glyma.19G251000 Glycine max HOM05D006573 ORTHO05D008073 4.1e-34 147.9 98 62.2
Lalb_Chr18g0044221 Lupinus albus HOM05D006573 ORTHO05D008073 4.1e-34 147.9 98 62.2
SMO270G0104 Selaginella moellendorffii HOM05D006573 ORTHO05D008073 4.1e-34 147.9 98 63.3
SGA_v2.0_scaffold13G06342 Striga asiatica HOM05D006573 ORTHO05D008073 4.1e-34 147.9 98 59.2
Duzib177G1122 Durio zibethinus HOM05D006573 ORTHO05D008073 5.3e-34 147.5 98 62.2
SalBow1G0293 Salvia bowleyana HOM05D006573 ORTHO05D008073 5.3e-34 147.5 98 62.2
Thecc.05G259800 Theobroma cacao HOM05D006573 ORTHO05D008073 5.3e-34 147.5 98 61.2
ATR0069G016 Amborella trichopoda HOM05D006573 ORTHO05D008073 6.9e-34 147.1 98 63.3
AL1G18980 Arabidopsis lyrata HOM05D006573 ORTHO05D008073 6.9e-34 147.1 99 62.6
MELO3C008677.2 Cucumis melo HOM05D006573 ORTHO05D008073 6.9e-34 147.1 98 60.2
arahy.Tifrunner.gnm1.ann1.ZGZX3T Arachis hypogaea HOM05D006573 ORTHO05D008073 9.1e-34 146.7 98 61.2
arahy.Tifrunner.gnm1.ann1.L0KK3Q Arachis hypogaea HOM05D006573 ORTHO05D008073 1.2e-33 146.4 98 60.2
Cpa.g.sc51.78 Carica papaya HOM05D006573 ORTHO05D008073 1.2e-33 146.4 98 60.2
CDE05G0621 Ceratophyllum demersum HOM05D006573 ORTHO05D008073 1.2e-33 146.4 98 62.2
CDE05G0683 Ceratophyllum demersum HOM05D006573 ORTHO05D008073 1.2e-33 146.4 98 61.2
Manes.09G144600 Manihot esculenta HOM05D006573 ORTHO05D008073 1.2e-33 146.4 98 59.2
A06p05540 Brassica napus HOM05D006573 ORTHO05D008073 1.5e-33 146.0 98 59.2
BraA06t23762Z Brassica rapa HOM05D006573 ORTHO05D008073 1.5e-33 146.0 98 59.2
Thhalv10007587m.g Eutrema salsugineum HOM05D006573 ORTHO05D008073 1.5e-33 146.0 98 61.2
CiPaw.07G075700 Carya illinoinensis HOM05D006573 ORTHO05D008073 2.6e-33 145.2 98 59.2
Atru.chr2.1254 Acer truncatum HOM05D006573 ORTHO05D008073 3.4e-33 144.8 98 60.2
AT1G08550 Arabidopsis thaliana HOM05D006573 ORTHO05D008073 4.5e-33 144.4 99 60.6
C05p06650 Brassica napus HOM05D006573 ORTHO05D008073 4.5e-33 144.4 98 59.2
BolC5t29425H Brassica oleracea HOM05D006573 ORTHO05D008073 4.5e-33 144.4 98 59.2
HPP92_020222 Vanilla planifolia HOM05D001545 ORTHO05D001600 4.5e-33 144.4 98 58.2
Zm00001eb085840 Zea mays HOM05D006573 ORTHO05D008073 4.5e-33 144.4 98 60.2
Sp1g07210 Schrenkiella parvula HOM05D006573 ORTHO05D008073 1.7e-32 142.5 98 59.2
Carub.0001s0791 Capsella rubella HOM05D006573 ORTHO05D008073 2.2e-32 142.1 99 59.6
CBR_g38554 Chara braunii HOM05D006573 ORTHO05D008073 3.8e-32 141.4 99 60.6
Lj2A407T38 Lonicera japonica HOM05D006573 ORTHO05D008073 5.5e-31 137.5 107 56.1
Os04g0379700 Oryza sativa ssp. japonica HOM05D006573 ORTHO05D008073 2.7e-30 135.2 95 58.9
Peaxi162Scf01011g00215 Petunia axillaris HOM05D006573 ORTHO05D008073 2.0e-28 129.0 98 57.1
Lsat_1_v5_gn_7_62281 Lactuca sativa HOM05D006573 ORTHO05D008073 4.4e-28 127.9 98 59.2
CSS0039030 Camellia sinensis var. sinensis HOM05D006573 ORTHO05D008073 4.8e-27 124.4 95 56.8
Lj2A405T39 Lonicera japonica HOM05D006573 ORTHO05D008073 4.1e-26 121.3 77 64.9
unitig_46.g17980 Utricularia gibba HOM05D006573 ORTHO05D008073 4.1e-26 121.3 78 65.4
DCAR_013654 Daucus carota HOM05D006573 ORTHO05D008073 3.5e-25 118.2 132 43.9
BcaB07g34098 Brassica carinata HOM05D006573 ORTHO05D008073 5.9e-25 117.5 98 53.1
Lj2C408T2 Lonicera japonica HOM05D006573 ORTHO05D008073 7.7e-25 117.1 76 64.5
Hma1.2p1_0123F.1_g058020 Hydrangea macrophylla HOM05D006573 ORTHO05D008073 2.5e-23 112.1 76 63.2
PGSC0003DMG400010690 Solanum tuberosum HOM05D006573 ORTHO05D008073 3.2e-23 111.7 75 62.7
vmacro12852 Vaccinium macrocarpon HOM05D006573 ORTHO05D008073 4.2e-23 111.3 76 61.8
PRCOL_00001224 Prasinoderma coloniale HOM05D006573 ORTHO05D008073 4.4e-20 101.3 107 43.9
Ah.06g188810 Amaranthus hybridus HOM05D006573 ORTHO05D008073 1.1e-18 96.7 98 45.9
MCO16G084 Micromonas commoda HOM05D006573 ORTHO05D008073 5.0e-16 87.8 100 44.0


User provided reference genes

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