Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO232G0017 Selaginella moellendorffii HOM05D003155 ORTHO05D379129 1.4e-176 622.9 320 100.0
SMO232G0073 Selaginella moellendorffii HOM05D003155 ORTHO05D004342 4.3e-40 169.5 305 34.8
SMO116G0007 Selaginella moellendorffii HOM05D003155 ORTHO05D004342 4.7e-39 166.0 287 34.1
Cc11_g04240 Coffea canephora HOM05D003155 ORTHO05D004342 8.9e-38 161.8 299 36.1
SGA_v2.0_scaffold1G00231 Striga asiatica HOM05D003155 ORTHO05D004342 8.9e-38 161.8 278 36.3
MSTRG.7527 Avicennia marina HOM05D003155 ORTHO05D004342 1.2e-37 161.4 283 35.7
CAN.G630.85 Capsicum annuum HOM05D003155 ORTHO05D004342 3.4e-37 159.8 286 35.3
Cc00_g15210 Coffea canephora HOM05D003155 ORTHO05D004342 3.4e-37 159.8 286 35.7
EL10Ac9g21469 Beta vulgaris HOM05D003155 ORTHO05D004342 7.5e-37 158.7 286 36.4
Sopen04g025920 Solanum pennellii HOM05D003155 ORTHO05D004342 7.5e-37 158.7 286 36.0
HanXRQChr17g0540071 Helianthus annuus HOM05D003155 ORTHO05D004342 9.8e-37 158.3 283 36.4
Solyc04g058090.3 Solanum lycopersicum HOM05D003155 ORTHO05D004342 9.8e-37 158.3 286 36.0
AagrBONN_evm.TU.Sc2ySwM_368.880 Anthoceros agrestis HOM05D003155 ORTHO05D004342 1.3e-36 157.9 290 33.8
Medtr8g093860 Medicago truncatula HOM05D003155 ORTHO05D004342 1.3e-36 157.9 286 35.3
Oeu040091.1 Olea europaea HOM05D003155 ORTHO05D004342 1.3e-36 157.9 286 35.7
RcHm_v2.0_Chr2g0117751 Rosa chinensis HOM05D003155 ORTHO05D004342 1.3e-36 157.9 283 36.4
Hund00057 Selenicereus undatus HOM05D003155 ORTHO05D004342 1.3e-36 157.9 286 36.4
CDE11G0169 Ceratophyllum demersum HOM05D003155 ORTHO05D004342 1.7e-36 157.5 284 35.2
Pp3c5_3030 Physcomitrium patens HOM05D003155 ORTHO05D004342 1.7e-36 157.5 294 34.7
PGSC0003DMG400023032 Solanum tuberosum HOM05D003155 ORTHO05D004342 1.7e-36 157.5 286 35.7
Atru.chr10.1937 Acer truncatum HOM05D003155 ORTHO05D004342 2.2e-36 157.1 286 35.3
Nn3g21630 Nelumbo nucifera HOM05D003155 ORTHO05D004342 2.2e-36 157.1 286 35.7
Nitab4.5_0002557g0030 Nicotiana tabacum HOM05D003155 ORTHO05D004342 2.2e-36 157.1 286 35.3
Pp3c6_25750 Physcomitrium patens HOM05D003155 ORTHO05D004342 2.2e-36 157.1 292 34.2
CSS0028730 Camellia sinensis var. sinensis HOM05D003155 ORTHO05D004342 2.9e-36 156.8 286 35.0
FAN26G2094 Fragaria x ananassa HOM05D003155 ORTHO05D004342 2.9e-36 156.8 283 35.0
FAN28G3015 Fragaria x ananassa HOM05D003155 ORTHO05D004342 2.9e-36 156.8 283 35.7
MBI19_g29997_MAGBIO Magnolia biondii HOM05D003155 ORTHO05D004342 2.9e-36 156.8 292 33.9
Ah.01g001460 Amaranthus hybridus HOM05D003155 ORTHO05D003938 3.7e-36 156.4 287 33.4
ECA246G1648 Erigeron canadensis HOM05D003155 ORTHO05D001887 3.7e-36 156.4 285 35.4
vmacro23398 Vaccinium macrocarpon HOM05D003155 ORTHO05D004342 6.4e-36 155.6 294 35.0
COL.COLO4_23262 Corchorus olitorius HOM05D003155 ORTHO05D004342 8.3e-36 155.2 286 36.0
Duzib138G0641 Durio zibethinus HOM05D003155 ORTHO05D004342 8.3e-36 155.2 286 35.3
FAN23G2124 Fragaria x ananassa HOM05D003155 ORTHO05D004342 8.3e-36 155.2 283 35.0
Lj3A1064T100 Lonicera japonica HOM05D003155 ORTHO05D004342 8.3e-36 155.2 287 36.6
AUR62013115 Chenopodium quinoa HOM05D003155 ORTHO05D004342 1.1e-35 154.8 286 35.3
Ca_14922_v3 Cicer arietinum L. HOM05D003155 ORTHO05D004342 1.1e-35 154.8 287 34.1
Ca_22781_v3 Cicer arietinum L. HOM05D003155 ORTHO05D004342 1.1e-35 154.8 287 34.1
Hma1.2p1_1785F.1_g302280 Hydrangea macrophylla HOM05D003155 ORTHO05D004342 1.1e-35 154.8 286 35.3
Lj4g0014336 Lotus japonicus HOM05D003155 ORTHO05D004342 1.1e-35 154.8 286 35.3
PSO541G5346 Papaver somniferum HOM05D003155 ORTHO05D004342 1.1e-35 154.8 287 34.5
TAR362G0957 Trochodendron aralioides HOM05D003155 ORTHO05D004342 1.1e-35 154.8 286 36.0
Os03g0831500 Oryza sativa ssp. japonica HOM05D003155 ORTHO05D004342 1.4e-35 154.5 289 34.6
FAN19G1072 Fragaria x ananassa HOM05D003155 ORTHO05D004342 1.9e-35 154.1 283 35.0
Gohir.A11G111100 Gossypium hirsutum HOM05D003155 ORTHO05D004342 1.9e-35 154.1 286 36.0
Gorai.007G124500 Gossypium raimondii HOM05D003155 ORTHO05D004342 1.9e-35 154.1 286 36.0
Lj5g0009987 Lotus japonicus HOM05D003155 ORTHO05D004342 1.9e-35 154.1 287 34.1
Potri.014G123000 Populus trichocarpa HOM05D003155 ORTHO05D004342 1.9e-35 154.1 284 36.6
Gohir.D11G116300 Gossypium hirsutum HOM05D003155 ORTHO05D004342 2.4e-35 153.7 286 35.7
Mapoly0003s0273 Marchantia polymorpha HOM05D003155 ORTHO05D004342 2.4e-35 153.7 290 32.1
SGA_v2.0_scaffold223G42841 Striga asiatica HOM05D003155 ORTHO05D004342 2.4e-35 153.7 277 35.7
Prupe.1G528600 Prunus persica HOM05D003155 ORTHO05D004342 3.2e-35 153.3 286 35.0
HPP92_001922 Vanilla planifolia HOM05D003155 ORTHO05D004342 3.2e-35 153.3 286 33.9
PGR066G0004 Punica granatum HOM05D003155 ORTHO05D004342 4.1e-35 152.9 284 35.2
PGR119G0649 Punica granatum HOM05D003155 ORTHO05D004342 4.1e-35 152.9 284 35.6
PGR142G1043 Punica granatum HOM05D003155 ORTHO05D004342 4.1e-35 152.9 284 35.2
HanXRQChr06g0174841 Helianthus annuus HOM05D003155 ORTHO05D004342 5.4e-35 152.5 283 35.3
Peaxi162Scf00591g00412 Petunia axillaris HOM05D003155 ORTHO05D004342 5.4e-35 152.5 286 35.3
TPR.G37349 Trifolium pratense HOM05D003155 ORTHO05D004342 5.4e-35 152.5 287 35.2
TAR362G0238 Trochodendron aralioides HOM05D003155 ORTHO05D004342 5.4e-35 152.5 286 35.0
ClCG01G001560 Citrullus lanatus HOM05D003155 ORTHO05D004342 7.0e-35 152.1 286 35.3
Haze_05010 Corylus avellana HOM05D003155 ORTHO05D004342 7.0e-35 152.1 286 36.0
FvH4_1g23040 Fragaria vesca HOM05D003155 ORTHO05D004342 7.0e-35 152.1 281 34.9
Nitab4.5_0000317g0060 Nicotiana tabacum HOM05D003155 ORTHO05D004342 7.0e-35 152.1 290 34.8
PRCOL_00001570 Prasinoderma coloniale HOM05D003155 ORTHO05D004342 7.0e-35 152.1 307 33.2
Actinidia11005 Actinidia chinensis HOM05D003155 ORTHO05D004342 9.2e-35 151.8 286 34.6
Eucgr.L02454 Eucalyptus grandis HOM05D003155 ORTHO05D004342 9.2e-35 151.8 284 35.6
Potri.002G198600 Populus trichocarpa HOM05D003155 ORTHO05D004342 9.2e-35 151.8 284 35.9
SalBow2G2017 Salvia bowleyana HOM05D003155 ORTHO05D004342 9.2e-35 151.8 286 34.3
Cfa005838 Carpinus fangiana HOM05D003155 ORTHO05D004342 1.2e-34 151.4 286 36.0
AUR62010120 Chenopodium quinoa HOM05D003155 ORTHO05D004342 1.2e-34 151.4 286 35.0
CsaV3_5G001710 Cucumis sativus L. HOM05D003155 ORTHO05D004342 1.2e-34 151.4 286 35.3
Thecc.01G310300 Theobroma cacao HOM05D003155 ORTHO05D004342 1.2e-34 151.4 286 35.3
Hund06387 Selenicereus undatus HOM05D003155 ORTHO05D004342 1.6e-34 151.0 286 34.3
Migut.M01874 Erythranthe guttata HOM05D003155 ORTHO05D004342 2.0e-34 150.6 286 35.3
Eucgr.A02767 Eucalyptus grandis HOM05D003155 ORTHO05D004342 2.0e-34 150.6 284 35.6
Sabra02G0159100 Salix brachista HOM05D003155 ORTHO05D004342 2.0e-34 150.6 284 35.2
GSVIVG01028086001 Vitis vinifera HOM05D003155 ORTHO05D004342 2.0e-34 150.6 286 35.7
MD08G1194700 Malus domestica HOM05D003155 ORTHO05D004342 2.7e-34 150.2 299 33.8
MD15G1382400 Malus domestica HOM05D003155 ORTHO05D004342 2.7e-34 150.2 299 34.8
PSO675G7447 Papaver somniferum HOM05D003155 ORTHO05D004342 2.7e-34 150.2 287 34.1
Sed0004341 Sechium edule HOM05D003155 ORTHO05D004342 2.7e-34 150.2 286 35.0
BraA09t40256Z Brassica rapa HOM05D003155 ORTHO05D004342 3.5e-34 149.8 301 34.2
MELO3C005781.2 Cucumis melo HOM05D003155 ORTHO05D004342 3.5e-34 149.8 286 35.0
Sc08g0003390 Simmondsia chinensis HOM05D003155 ORTHO05D004342 4.6e-34 149.4 291 34.7
ATR0693G061 Amborella trichopoda HOM05D003155 ORTHO05D004342 7.8e-34 148.7 287 33.1
CANSAT25G1273 Cannabis sativa HOM05D003155 ORTHO05D004342 7.8e-34 148.7 287 35.2
Cpa.g.sc8.158 Carica papaya HOM05D003155 ORTHO05D004342 7.8e-34 148.7 292 34.6
Thhalv10010436m.g Eutrema salsugineum HOM05D003155 ORTHO05D004342 7.8e-34 148.7 287 35.2
Manes.01G225900 Manihot esculenta HOM05D003155 ORTHO05D004342 7.8e-34 148.7 284 35.6
Peaxi162Scf00066g00524 Petunia axillaris HOM05D003155 ORTHO05D004342 7.8e-34 148.7 290 35.5
A09p48030 Brassica napus HOM05D003155 ORTHO05D004342 1.0e-33 148.3 300 34.0
BolC8t50632H Brassica oleracea HOM05D003155 ORTHO05D004342 1.0e-33 148.3 300 34.0
SalBow8G2165 Salvia bowleyana HOM05D003155 ORTHO05D004342 1.3e-33 147.9 286 32.9
unitig_37.g12904 Utricularia gibba HOM05D003155 ORTHO05D004342 1.3e-33 147.9 275 35.6
VMungo0251G2281 Vigna mungo HOM05D003155 ORTHO05D004342 1.3e-33 147.9 286 33.9
BraA07t29916Z Brassica rapa HOM05D003155 ORTHO05D004342 1.7e-33 147.5 295 33.6
ECA248G1812 Erigeron canadensis HOM05D003155 ORTHO05D004342 1.7e-33 147.5 277 35.4
Aa31sc33G80 Aethionema arabicum HOM05D003155 ORTHO05D004342 2.3e-33 147.1 287 34.8
A07p22400 Brassica napus HOM05D003155 ORTHO05D004342 2.3e-33 147.1 300 33.7
Lsat_1_v5_gn_3_29341 Lactuca sativa HOM05D003155 ORTHO05D004342 2.3e-33 147.1 288 35.1
BolC6t37446H Brassica oleracea HOM05D003155 ORTHO05D004342 3.0e-33 146.7 300 34.0
Manes.05G001800 Manihot esculenta HOM05D003155 ORTHO05D004342 3.0e-33 146.7 284 34.9
Glyma.08G001000 Glycine max HOM05D003155 ORTHO05D004342 5.0e-33 146.0 287 33.8
MD08G1194300 Malus domestica HOM05D003155 ORTHO05D004342 5.0e-33 146.0 299 33.4
TWI09G1633 Tripterygium wilfordii HOM05D003155 ORTHO05D004342 5.0e-33 146.0 284 34.5
Glyma.05G192900 Glycine max HOM05D003155 ORTHO05D004342 6.6e-33 145.6 287 33.4
arahy.Tifrunner.gnm1.ann1.PM89VL Arachis hypogaea HOM05D003155 ORTHO05D004342 8.6e-33 145.2 286 33.6
C06p22560 Brassica napus HOM05D003155 ORTHO05D004342 8.6e-33 145.2 300 33.7
CARHR165020 Cardamine hirsuta HOM05D003155 ORTHO05D004342 8.6e-33 145.2 287 32.1
CBR_g16871 Chara braunii HOM05D003155 ORTHO05D004342 8.6e-33 145.2 304 31.2
Sp5g07410 Schrenkiella parvula HOM05D003155 ORTHO05D004342 8.6e-33 145.2 287 34.1
MD05G1254600 Malus domestica HOM05D003155 ORTHO05D004342 1.1e-32 144.8 287 35.5
BcaB02g07704 Brassica carinata HOM05D003155 ORTHO05D004342 1.5e-32 144.4 287 34.1
Phvul.002G273500 Phaseolus vulgaris HOM05D003155 ORTHO05D004342 1.5e-32 144.4 287 34.1
THA.LOC104817470 Tarenaya hassleriana HOM05D003155 ORTHO05D004342 1.5e-32 144.4 287 34.5
Aqoxy5G00145 Aquilegia oxysepala HOM05D003155 ORTHO05D004342 1.9e-32 144.1 286 33.6
arahy.Tifrunner.gnm1.ann1.DJPQ45 Arachis hypogaea HOM05D003155 ORTHO05D004342 1.9e-32 144.1 286 33.2
AT3G55010 Arabidopsis thaliana HOM05D003155 ORTHO05D004342 2.5e-32 143.7 287 33.1
BcaC08g44717 Brassica carinata HOM05D003155 ORTHO05D004342 2.5e-32 143.7 287 33.8
Zm00001eb284260 Zea mays HOM05D003155 ORTHO05D004342 2.5e-32 143.7 286 32.9
C08p30250 Brassica napus HOM05D003155 ORTHO05D004342 3.3e-32 143.3 300 33.3
CiPaw.13G147200 Carya illinoinensis HOM05D003155 ORTHO05D004342 3.3e-32 143.3 301 34.2
Lalb_Chr08g0238231 Lupinus albus HOM05D003155 ORTHO05D004342 3.3e-32 143.3 287 32.8
AL5G36130 Arabidopsis lyrata HOM05D003155 ORTHO05D004342 7.3e-32 142.1 287 32.4
CDE05G1659 Ceratophyllum demersum HOM05D003155 ORTHO05D004342 7.3e-32 142.1 297 32.7
Cfa005833 Carpinus fangiana HOM05D003155 ORTHO05D004342 9.5e-32 141.7 284 34.9
Carub.0005s2164 Capsella rubella HOM05D003155 ORTHO05D004342 1.6e-31 141.0 287 32.1
DCAR_024227 Daucus carota HOM05D003155 ORTHO05D004342 1.6e-31 141.0 286 33.9
SEGI_27039 Sequoiadendron giganteum HOM05D003155 ORTHO05D004342 4.7e-31 139.4 288 32.3
Oeu008950.2 Olea europaea HOM05D003155 ORTHO05D004342 6.2e-31 139.0 289 34.6
RcHm_v2.0_Chr7g0218451 Rosa chinensis HOM05D003155 ORTHO05D004342 6.2e-31 139.0 272 33.8
Cre07.g318750 Chlamydomonas reinhardtii HOM05D003155 ORTHO05D004342 1.8e-30 137.5 284 29.2
MD15G1382500 Malus domestica HOM05D003155 ORTHO05D004342 1.2e-29 134.8 276 33.0
Psat7g045040 Pisum sativum HOM05D003155 ORTHO05D004342 7.5e-29 132.1 255 33.3
Thhalv10018710m.g Eutrema salsugineum HOM05D003155 ORTHO05D004342 6.4e-28 129.0 291 32.3
PGSC0003DMG400027622 Solanum tuberosum HOM05D003155 ORTHO05D004342 1.1e-27 128.3 259 34.4
MD08G1193800 Malus domestica HOM05D003155 ORTHO05D004342 1.9e-27 127.5 267 32.6
MD08G1195100 Malus domestica HOM05D003155 ORTHO05D004342 1.9e-27 127.5 267 32.6
CSS0047504 Camellia sinensis var. sinensis HOM05D003155 ORTHO05D004342 5.4e-27 125.9 291 31.3
DCAR_027274 Daucus carota HOM05D003155 ORTHO05D004342 5.4e-27 125.9 286 31.5
TWI53G1268 Tripterygium wilfordii HOM05D003155 ORTHO05D004342 2.1e-26 124.0 246 33.7
TWI53G1422 Tripterygium wilfordii HOM05D003155 ORTHO05D004342 2.1e-26 124.0 246 33.7
vmacro12338 Vaccinium macrocarpon HOM05D003155 ORTHO05D004342 2.1e-26 124.0 276 33.7
Dinv33099 Davidia involucrata HOM05D003155 ORTHO05D004342 4.3e-24 116.3 232 35.8
Sp5g14230 Schrenkiella parvula HOM05D003155 ORTHO05D004342 4.3e-24 116.3 265 30.9
QL05p045478 Quercus lobata HOM05D003155 ORTHO05D004342 3.6e-23 113.2 179 39.1
CDE05G2880 Ceratophyllum demersum HOM05D003155 ORTHO05D004342 1.8e-22 110.9 243 30.9
RcHm_v2.0_Chr2g0117621 Rosa chinensis HOM05D003155 ORTHO05D004342 3.4e-21 106.7 181 36.5
Haze_26160 Corylus avellana HOM05D003155 ORTHO05D004342 2.9e-20 103.6 282 28.0
Cfa023437 Carpinus fangiana HOM05D000974 ORTHO05D006000 1.1e-19 101.7 290 28.3
Atru.chr10.1938 Acer truncatum HOM05D003155 ORTHO05D004342 2.4e-19 100.5 170 36.5
CARHR165030 Cardamine hirsuta HOM05D003155 ORTHO05D004342 5.4e-19 99.4 287 30.0
BcaNung04653 Brassica carinata HOM05D003155 ORTHO05D004342 9.2e-19 98.6 203 34.0
TPR.G31811 Trifolium pratense HOM05D003155 ORTHO05D004342 4.6e-18 96.3 239 31.0
Lalb_Chr11g0068521 Lupinus albus HOM05D003155 ORTHO05D004342 3.0e-17 93.6 187 35.3
CARHR047360 Cardamine hirsuta HOM05D003155 ORTHO05D004342 1.5e-16 91.3 185 34.1
Lsat_1_v5_gn_8_28960 Lactuca sativa HOM05D003155 ORTHO05D004342 3.3e-16 90.1 241 29.5
AagrBONN_evm.TU.Sc2ySwM_344.1369 Anthoceros agrestis HOM05D003155 ORTHO05D004342 4.3e-16 89.7 199 31.7
GSVIVG01011409001 Vitis vinifera HOM05D003155 ORTHO05D004342 7.3e-16 89.0 185 34.6
CSS0042611 Camellia sinensis var. sinensis HOM05D003155 ORTHO05D004342 3.6e-15 86.7 133 36.1
MD08G1195000 Malus domestica HOM05D003155 ORTHO05D004342 1.1e-14 85.1 217 30.9
Dinv10072 Davidia involucrata HOM05D003155 ORTHO05D004342 6.9e-14 82.4 142 35.9
Medtr5g093890 Medicago truncatula HOM05D003155 ORTHO05D004342 2.9e-12 77.0 113 37.2
CiPaw.07G115200 Carya illinoinensis HOM05D003155 ORTHO05D004342 8.4e-12 75.5 139 33.8
CAN.G405.2 Capsicum annuum HOM05D003155 ORTHO05D004342 1.1e-11 75.1 179 30.7
vmacro21347 Vaccinium macrocarpon HOM05D003155 ORTHO05D004342 1.9e-11 74.3 153 32.7
Zm00001eb115440 Zea mays HOM05D003155 ORTHO05D004342 1.9e-11 74.3 179 30.2
AagrBONN_evm.TU.Sc2ySwM_368.885 Anthoceros agrestis HOM05D003155 ORTHO05D004342 3.2e-11 73.6 101 35.6
Lj6C819T16 Lonicera japonica HOM05D003155 ORTHO05D004342 1.3e-09 68.2 278 24.5
Cfa005835 Carpinus fangiana HOM05D003155 ORTHO05D004342 2.5e-08 63.9 186 29.6
RcHm_v2.0_Chr5g0056581 Rosa chinensis HOM05D003155 ORTHO05D004342 3.3e-08 63.5 131 33.6
Lsat_1_v5_gn_5_90561 Lactuca sativa HOM05D003155 ORTHO05D004342 5.6e-08 62.8 114 36.0
Lsat_1_v5_gn_0_24560 Lactuca sativa HOM05D003155 ORTHO05D004342 1.6e-07 61.2 85 43.5
Lsat_1_v5_gn_3_120781 Lactuca sativa HOM05D003155 ORTHO05D004342 1.6e-07 61.2 85 43.5
Lsat_1_v5_gn_4_175621 Lactuca sativa HOM05D003155 ORTHO05D004342 1.6e-07 61.2 85 43.5
Lsat_1_v5_gn_6_3740 Lactuca sativa HOM05D003155 ORTHO05D004342 1.6e-07 61.2 85 43.5
Lsat_1_v5_gn_9_22280 Lactuca sativa HOM05D003155 ORTHO05D004342 2.8e-07 60.5 114 35.1
CSS0004103 Camellia sinensis var. sinensis HOM05D003155 ORTHO05D004342 1.8e-06 57.8 111 30.6
Dinv10071 Davidia involucrata HOM05D003155 ORTHO05D004342 3.1e-06 57.0 66 40.9


User provided reference genes

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