Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO203G0232 Selaginella moellendorffii HOM05D004650 ORTHO05D005715 1.1e-145 520.0 273 100.0
SMO203G0028 Selaginella moellendorffii HOM05D004650 ORTHO05D005715 2.4e-60 236.5 255 58.0
SMO357G0006 Selaginella moellendorffii HOM05D004650 ORTHO05D005715 3.3e-33 146.4 261 42.1
AagrBONN_evm.TU.Sc2ySwM_369.318 Anthoceros agrestis HOM05D004650 ORTHO05D005715 1.4e-28 131.0 153 51.0
Mapoly0009s0044 Marchantia polymorpha HOM05D004650 ORTHO05D005715 7.4e-25 118.6 156 47.4
CBR_g29474 Chara braunii HOM05D004650 ORTHO05D005715 4.0e-23 112.8 180 38.9
Pp3c11_7560 Physcomitrium patens HOM05D004650 ORTHO05D005715 1.7e-21 107.5 157 42.7
A09p58230 Brassica napus HOM05D004650 ORTHO05D005715 2.2e-21 107.1 152 42.8
Eucgr.I01295 Eucalyptus grandis HOM05D004650 ORTHO05D005715 6.5e-21 105.5 154 42.2
HanXRQChr16g0505091 Helianthus annuus HOM05D004650 ORTHO05D005715 6.5e-21 105.5 149 44.3
Lsat_1_v5_gn_7_91680 Lactuca sativa HOM05D004650 ORTHO05D005715 6.5e-21 105.5 155 43.2
Sp4g00610 Schrenkiella parvula HOM05D004650 ORTHO05D005715 6.5e-21 105.5 152 42.1
C08p41530 Brassica napus HOM05D004650 ORTHO05D005715 8.4e-21 105.1 152 42.1
BolC8t51714H Brassica oleracea HOM05D004650 ORTHO05D005715 8.4e-21 105.1 152 42.1
ECA236G4812 Erigeron canadensis HOM05D004650 ORTHO05D005715 8.4e-21 105.1 155 42.6
Glyma.13G201700 Glycine max HOM05D004650 ORTHO05D005715 1.1e-20 104.8 178 39.3
BcaC07g41146 Brassica carinata HOM05D004650 ORTHO05D005715 1.4e-20 104.4 152 42.1
AUR62015438 Chenopodium quinoa HOM05D004650 ORTHO05D005715 1.9e-20 104.0 151 41.7
Cpa.g.sc150.59 Carica papaya HOM05D004650 ORTHO05D005715 3.2e-20 103.2 183 38.8
AUR62002225 Chenopodium quinoa HOM05D004650 ORTHO05D005715 4.2e-20 102.8 151 41.1
THA.LOC104806024 Tarenaya hassleriana HOM05D004650 ORTHO05D005715 5.5e-20 102.4 154 44.8
CANSAT11G1974 Cannabis sativa HOM05D004650 ORTHO05D005715 7.1e-20 102.1 148 42.6
Lalb_Chr19g0132251 Lupinus albus HOM05D004650 ORTHO05D005715 7.1e-20 102.1 177 37.3
Phvul.011G210900 Phaseolus vulgaris HOM05D004650 ORTHO05D005715 9.3e-20 101.7 170 39.4
SalBow3G4209 Salvia bowleyana HOM05D004650 ORTHO05D005715 9.3e-20 101.7 184 37.5
Lsat_1_v5_gn_6_14381 Lactuca sativa HOM05D004650 ORTHO05D005715 1.2e-19 101.3 146 43.2
Aqoxy4G02770 Aquilegia oxysepala HOM05D004650 ORTHO05D005715 1.6e-19 100.9 154 41.6
Aqoxy5G01524 Aquilegia oxysepala HOM05D004650 ORTHO05D005715 1.6e-19 100.9 154 41.6
TWI75G0911 Tripterygium wilfordii HOM05D004650 ORTHO05D005715 2.1e-19 100.5 152 39.5
Carub.0004s0049 Capsella rubella HOM05D004650 ORTHO05D005715 2.7e-19 100.1 150 42.0
PGR142G2793 Punica granatum HOM05D004650 ORTHO05D005715 2.7e-19 100.1 149 40.3
Gohir.A13G019000 Gossypium hirsutum HOM05D004650 ORTHO05D005715 3.5e-19 99.8 148 43.2
Aa31LG3G140 Aethionema arabicum HOM05D004650 ORTHO05D005715 4.6e-19 99.4 152 40.1
BraA04t17255Z Brassica rapa HOM05D004650 ORTHO05D005715 4.6e-19 99.4 181 37.6
Cfa005063 Carpinus fangiana HOM05D004650 ORTHO05D005715 4.6e-19 99.4 183 38.3
Lalb_Chr03g0034141 Lupinus albus HOM05D004650 ORTHO05D005715 4.6e-19 99.4 191 36.6
VMungo1127G0931 Vigna mungo HOM05D004650 ORTHO05D005715 4.6e-19 99.4 170 37.6
BraA09t41211Z Brassica rapa HOM05D004650 ORTHO05D005715 6.0e-19 99.0 153 41.2
PSO675G4364 Papaver somniferum HOM05D004650 ORTHO05D005715 6.0e-19 99.0 158 38.6
Cc02_g17180 Coffea canephora HOM05D004650 ORTHO05D005715 7.9e-19 98.6 167 36.5
CSS0049841 Camellia sinensis var. sinensis HOM05D004650 ORTHO05D005715 1.0e-18 98.2 194 34.0
CDE02G0935 Ceratophyllum demersum HOM05D004650 ORTHO05D005715 1.0e-18 98.2 184 37.0
Glyma.12G236300 Glycine max HOM05D004650 ORTHO05D005715 1.0e-18 98.2 167 38.3
PSO541G1340 Papaver somniferum HOM05D004650 ORTHO05D005715 1.0e-18 98.2 158 39.9
AL4G10620 Arabidopsis lyrata HOM05D004650 ORTHO05D005715 1.3e-18 97.8 150 40.0
arahy.Tifrunner.gnm1.ann1.JDK4IY Arachis hypogaea HOM05D004650 ORTHO05D005715 1.3e-18 97.8 146 40.4
Migut.G00750 Erythranthe guttata HOM05D004650 ORTHO05D005715 1.3e-18 97.8 150 38.0
Manes.04G086301 Manihot esculenta HOM05D004650 ORTHO05D005715 1.3e-18 97.8 167 37.7
Medtr1g080390 Medicago truncatula HOM05D004650 ORTHO05D005715 1.3e-18 97.8 183 36.6
SEGI_24468 Sequoiadendron giganteum HOM05D004650 ORTHO05D005715 1.3e-18 97.8 151 39.7
Prupe.8G089700 Prunus persica HOM05D004650 ORTHO05D005715 1.8e-18 97.4 148 37.8
Rhsim11G0181000 Rhododendron simsii HOM05D004650 ORTHO05D005715 1.8e-18 97.4 173 38.7
RcHm_v2.0_Chr6g0266121 Rosa chinensis HOM05D004650 ORTHO05D005715 1.8e-18 97.4 148 41.2
Sed0015033 Sechium edule HOM05D004650 ORTHO05D005715 1.8e-18 97.4 171 40.9
CiPaw.06G132000 Carya illinoinensis HOM05D004650 ORTHO05D005715 2.3e-18 97.1 182 36.3
Psat2g040720 Pisum sativum HOM05D004650 ORTHO05D005715 2.3e-18 97.1 169 38.5
Thhalv10023293m.g Eutrema salsugineum HOM05D004650 ORTHO05D005715 3.0e-18 96.7 192 35.4
Gohir.A03G197200 Gossypium hirsutum HOM05D004650 ORTHO05D005715 3.0e-18 96.7 173 38.2
SGA_v2.0_scaffold122G33210 Striga asiatica HOM05D004650 ORTHO05D005715 3.0e-18 96.7 154 37.7
AT2G21440 Arabidopsis thaliana HOM05D004650 ORTHO05D005715 3.9e-18 96.3 150 40.0
arahy.Tifrunner.gnm1.ann1.EM89X0 Arachis hypogaea HOM05D004650 ORTHO05D005715 3.9e-18 96.3 146 39.0
FAN10G1385 Fragaria x ananassa HOM05D004650 ORTHO05D005715 3.9e-18 96.3 148 38.5
Gohir.D13G029900 Gossypium hirsutum HOM05D004650 ORTHO05D005715 3.9e-18 96.3 195 37.4
Gorai.013G034200 Gossypium raimondii HOM05D004650 ORTHO05D005715 3.9e-18 96.3 195 37.4
Hund11840 Selenicereus undatus HOM05D004650 ORTHO05D005715 3.9e-18 96.3 184 37.5
FvH4_7g12280 Fragaria vesca HOM05D004650 ORTHO05D005715 5.1e-18 95.9 148 38.5
FAN10G4111 Fragaria x ananassa HOM05D004650 ORTHO05D005715 5.1e-18 95.9 147 38.8
Sc08g0000680 Simmondsia chinensis HOM05D004650 ORTHO05D005715 5.1e-18 95.9 151 38.4
Thecc.02G079400 Theobroma cacao HOM05D004650 ORTHO05D005715 5.1e-18 95.9 140 40.0
CARHR112350 Cardamine hirsuta HOM05D004650 ORTHO05D005715 1.1e-17 94.7 196 35.2
FAN27G3342 Fragaria x ananassa HOM05D004650 ORTHO05D005715 1.5e-17 94.4 173 37.6
Nn5g29730 Nelumbo nucifera HOM05D004650 ORTHO05D005715 1.5e-17 94.4 170 36.5
QL11p045374 Quercus lobata HOM05D004650 ORTHO05D005715 1.5e-17 94.4 98 49.0
A04p16150 Brassica napus HOM05D004650 ORTHO05D005715 1.9e-17 94.0 175 36.0
Ca_23900_v3 Cicer arietinum L. HOM05D004650 ORTHO05D005715 1.9e-17 94.0 183 36.1
CsaV3_7G000160 Cucumis sativus L. HOM05D004650 ORTHO05D005715 1.9e-17 94.0 176 39.2
ClCG02G004760 Citrullus lanatus HOM05D004650 ORTHO05D005715 2.5e-17 93.6 168 38.7
FAN20G2064 Fragaria x ananassa HOM05D004650 ORTHO05D005715 2.5e-17 93.6 173 36.4
Lj1g0020880 Lotus japonicus HOM05D004650 ORTHO05D005715 2.5e-17 93.6 191 37.7
Nitab4.5_0003234g0030 Nicotiana tabacum HOM05D004650 ORTHO05D005715 2.5e-17 93.6 148 37.8
GSVIVG01024222001 Vitis vinifera HOM05D004650 ORTHO05D005715 2.5e-17 93.6 185 36.8
ATR0564G425 Amborella trichopoda HOM05D004650 ORTHO05D005715 3.3e-17 93.2 178 35.4
MD10G1067900 Malus domestica HOM05D004650 ORTHO05D005715 3.3e-17 93.2 173 34.1
Solyc01g109990.4 Solanum lycopersicum HOM05D004650 ORTHO05D005715 3.3e-17 93.2 176 35.8
Sopen01g052180 Solanum pennellii HOM05D004650 ORTHO05D005715 3.3e-17 93.2 176 35.8
vmacro02074 Vaccinium macrocarpon HOM05D004650 ORTHO05D005715 3.3e-17 93.2 136 40.4
EL10Ac3g05863 Beta vulgaris HOM05D004650 ORTHO05D005715 4.3e-17 92.8 180 37.2
FvH4_2g09800 Fragaria vesca HOM05D004650 ORTHO05D005715 4.3e-17 92.8 173 37.6
FAN24G0050 Fragaria x ananassa HOM05D004650 ORTHO05D005715 4.3e-17 92.8 173 37.6
Oeu050697.1 Olea europaea HOM05D004650 ORTHO05D005715 4.3e-17 92.8 172 37.8
Zm00001eb212720 Zea mays HOM05D004650 ORTHO05D005715 4.3e-17 92.8 182 34.6
Haze_02320 Corylus avellana HOM05D004650 ORTHO05D005715 5.7e-17 92.4 185 35.7
MELO3C013443.2 Cucumis melo HOM05D004650 ORTHO05D005715 5.7e-17 92.4 176 37.5
TPR.G3476 Trifolium pratense HOM05D004650 ORTHO05D005715 9.6e-17 91.7 176 36.9
MSTRG.5411 Avicennia marina HOM05D004650 ORTHO05D005715 1.3e-16 91.3 148 37.8
DCAR_023026 Daucus carota HOM05D004650 ORTHO05D005715 1.3e-16 91.3 187 35.8
Dinv42031 Davidia involucrata HOM05D004650 ORTHO05D005715 1.3e-16 91.3 162 37.0
Nitab4.5_0009512g0020 Nicotiana tabacum HOM05D004650 ORTHO05D005715 2.1e-16 90.5 169 34.9
Os03g0801800 Oryza sativa ssp. japonica HOM05D004650 ORTHO05D005715 2.8e-16 90.1 184 34.2
MD05G1059700 Malus domestica HOM05D004650 ORTHO05D005715 3.7e-16 89.7 173 34.7
C04p50630 Brassica napus HOM05D004650 ORTHO05D005715 4.8e-16 89.4 179 35.2
Potri.009G120900 Populus trichocarpa HOM05D004650 ORTHO05D005715 4.8e-16 89.4 148 38.5
SHI01140 Sapria himalayana HOM05D004650 ORTHO05D005715 4.8e-16 89.4 99 44.4
Atru.chr5.3088 Acer truncatum HOM05D004650 ORTHO05D005715 6.2e-16 89.0 172 37.8
FvH4_7g06401 Fragaria vesca HOM05D004650 ORTHO05D005715 6.2e-16 89.0 137 38.0
TAR633G2180 Trochodendron aralioides HOM05D004650 ORTHO05D005715 1.1e-15 88.2 90 46.7
Ciclev10027768m.g Citrus clementina HOM05D004650 ORTHO05D005715 1.8e-15 87.4 148 37.2
Lj5C193G19 Lonicera japonica HOM05D004650 ORTHO05D005715 2.4e-15 87.0 145 37.2
TPR.G23542 Trifolium pratense HOM05D004650 ORTHO05D005715 3.4e-14 83.2 97 41.2
Sabra09G0093300 Salix brachista HOM05D004650 ORTHO05D005715 5.8e-14 82.4 169 36.1
Actinidia11754 Actinidia chinensis HOM05D004650 ORTHO05D005715 4.2e-12 76.3 83 43.4
FAN10G1169 Fragaria x ananassa HOM05D004650 ORTHO05D005715 3.0e-10 70.1 189 27.0
COL.COLO4_26001 Corchorus olitorius HOM05D004650 ORTHO05D005715 1.4e-07 61.2 98 35.7
Cre02.g104650 Chlamydomonas reinhardtii HOM05D004650 ORTHO05D005715 3.1e-07 60.1 64 45.3
MBI03_g33031_MAGBIO Magnolia biondii HOM05D004650 ORTHO05D005715 3.1e-07 60.1 192 29.2
PRCOL_00006869 Prasinoderma coloniale HOM05D004650 ORTHO05D005715 5.9e-06 55.8 80 40.0
FAN15G0405 Fragaria x ananassa HOM05D004650 ORTHO05D005715 1.0e-05 55.1 43 55.8


User provided reference genes

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