Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO203G0194 Selaginella moellendorffii HOM05D003498 ORTHO05D378116 3.3e-215 751.5 380 100.0
SMO327G0007 Selaginella moellendorffii HOM05D003498 ORTHO05D379411 7.6e-103 378.3 410 58.3
SMO327G0030 Selaginella moellendorffii HOM05D003498 ORTHO05D003393 4.9e-41 172.9 196 55.1
SMO201G0123 Selaginella moellendorffii HOM05D003498 ORTHO05D004191 7.8e-23 112.5 76 73.7
SEGI_21909 Sequoiadendron giganteum HOM05D003498 ORTHO05D004191 6.8e-19 99.4 76 64.5
ATR1120G052 Amborella trichopoda HOM05D003498 ORTHO05D004191 2.0e-18 97.8 76 61.8
Os07g0639900 Oryza sativa ssp. japonica HOM05D003498 ORTHO05D004191 4.4e-18 96.7 62 67.7
unitig_748.g7053 Utricularia gibba HOM05D003498 ORTHO05D004191 7.5e-18 95.9 62 69.4
Zm00001eb109870 Zea mays HOM05D003498 ORTHO05D004191 7.5e-18 95.9 62 67.7
FAN09G1233 Fragaria x ananassa HOM05D003498 ORTHO05D004191 9.9e-18 95.5 80 58.8
FAN14G2218 Fragaria x ananassa HOM05D003498 ORTHO05D004191 9.9e-18 95.5 80 58.8
Thecc.04G123800 Theobroma cacao HOM05D003498 ORTHO05D004191 9.9e-18 95.5 81 58.0
CANSAT56G0570 Cannabis sativa HOM05D003498 ORTHO05D004191 1.3e-17 95.1 80 57.5
FvH4_6g52930 Fragaria vesca HOM05D003498 ORTHO05D004191 1.3e-17 95.1 80 57.5
PGR083G1382 Punica granatum HOM05D003498 ORTHO05D004191 1.3e-17 95.1 76 60.5
RcHm_v2.0_Chr2g0174641 Rosa chinensis HOM05D003498 ORTHO05D004191 1.3e-17 95.1 80 58.8
FAN02G3013 Fragaria x ananassa HOM05D003498 ORTHO05D004191 1.7e-17 94.7 80 57.5
Duzib133G0132 Durio zibethinus HOM05D003498 ORTHO05D004191 2.2e-17 94.4 81 58.0
Lj7A607T30 Lonicera japonica HOM05D003498 ORTHO05D004191 2.2e-17 94.4 66 63.6
MBI11_g00914_MAGBIO Magnolia biondii HOM05D003498 ORTHO05D004191 2.9e-17 94.0 62 69.4
MD17G1016300 Malus domestica HOM05D003498 ORTHO05D004191 2.9e-17 94.0 80 57.5
PSO170G3520 Papaver somniferum HOM05D003498 ORTHO05D004191 2.9e-17 94.0 62 66.1
PSO210G3977 Papaver somniferum HOM05D003498 ORTHO05D004191 2.9e-17 94.0 62 66.1
Atru.chr10.1225 Acer truncatum HOM05D003498 ORTHO05D004191 3.7e-17 93.6 81 56.8
FAN05G5642 Fragaria x ananassa HOM05D003498 ORTHO05D004191 3.7e-17 93.6 80 57.5
MD09G1015900 Malus domestica HOM05D003498 ORTHO05D004191 3.7e-17 93.6 80 57.5
Oeu001405.1 Olea europaea HOM05D003498 ORTHO05D004191 3.7e-17 93.6 76 55.3
Ciclev10016330m.g Citrus clementina HOM05D003498 ORTHO05D004191 4.9e-17 93.2 81 55.6
Glyma.13G277200 Glycine max HOM05D003498 ORTHO05D004191 4.9e-17 93.2 81 56.8
Gohir.D07G080500 Gossypium hirsutum HOM05D003498 ORTHO05D004191 4.9e-17 93.2 81 58.0
Mapoly0001s0438 Marchantia polymorpha HOM05D003498 ORTHO05D004191 4.9e-17 93.2 76 59.2
Nitab4.5_0011275g0010 Nicotiana tabacum HOM05D003498 ORTHO05D004191 4.9e-17 93.2 62 69.4
Solyc07g048010.4 Solanum lycopersicum HOM05D003498 ORTHO05D004191 4.9e-17 93.2 62 66.1
Sopen07g024440 Solanum pennellii HOM05D003498 ORTHO05D004191 4.9e-17 93.2 62 66.1
COL.COLO4_27123 Corchorus olitorius HOM05D003498 ORTHO05D004191 6.4e-17 92.8 81 56.8
Duzib138G0533 Durio zibethinus HOM05D003498 ORTHO05D004191 6.4e-17 92.8 81 56.8
Gohir.A11G167100 Gossypium hirsutum HOM05D003498 ORTHO05D004191 6.4e-17 92.8 81 56.8
Gorai.007G185700 Gossypium raimondii HOM05D003498 ORTHO05D004191 6.4e-17 92.8 81 56.8
Nn3g16542 Nelumbo nucifera HOM05D003498 ORTHO05D004191 6.4e-17 92.8 67 62.7
PSO541G3815 Papaver somniferum HOM05D003498 ORTHO05D004191 6.4e-17 92.8 62 66.1
PSO675G6488 Papaver somniferum HOM05D003498 ORTHO05D004191 6.4e-17 92.8 62 66.1
SGA_v2.0_scaffold68G22828 Striga asiatica HOM05D003498 ORTHO05D004191 6.4e-17 92.8 62 66.1
THA.LOC104810770 Tarenaya hassleriana HOM05D003498 ORTHO05D004191 6.4e-17 92.8 80 56.2
TAR374G1609 Trochodendron aralioides HOM05D003498 ORTHO05D004191 6.4e-17 92.8 62 66.1
TAR622G0600 Trochodendron aralioides HOM05D003498 ORTHO05D004191 6.4e-17 92.8 62 66.1
GSVIVG01001834001 Vitis vinifera HOM05D003498 ORTHO05D004191 6.4e-17 92.8 62 66.1
MELO3C017855.2 Cucumis melo HOM05D003498 ORTHO05D004191 8.3e-17 92.4 81 56.8
Aqoxy3G02772 Aquilegia oxysepala HOM05D003498 ORTHO05D004191 1.1e-16 92.0 62 64.5
Aqoxy51s003 Aquilegia oxysepala HOM05D003498 ORTHO05D004191 1.1e-16 92.0 62 64.5
Aqoxy7G03334 Aquilegia oxysepala HOM05D003498 ORTHO05D004191 1.1e-16 92.0 62 64.5
CSS0002226 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 1.1e-16 92.0 62 64.5
CSS0006967 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 1.1e-16 92.0 62 64.5
CSS0027983 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 1.1e-16 92.0 62 64.5
CSS0030890 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 1.1e-16 92.0 62 64.5
Eucgr.A01374 Eucalyptus grandis HOM05D003498 ORTHO05D004191 1.1e-16 92.0 80 56.2
Hma1.2p1_0279F.1_g112380 Hydrangea macrophylla HOM05D003498 ORTHO05D004191 1.1e-16 92.0 62 66.1
Medtr0274s0020 Medicago truncatula HOM05D003498 ORTHO05D004191 1.1e-16 92.0 80 55.0
Medtr1g092440 Medicago truncatula HOM05D000397 ORTHO05D004191 1.1e-16 92.0 80 55.0
Nitab4.5_0000441g0220 Nicotiana tabacum HOM05D003498 ORTHO05D004191 1.1e-16 92.0 62 66.1
Nitab4.5_0002877g0040 Nicotiana tabacum HOM05D003498 ORTHO05D004191 1.1e-16 92.0 62 66.1
PGR083G2492 Punica granatum HOM05D003498 ORTHO05D004191 1.1e-16 92.0 80 55.0
SGA_v2.0_scaffold47G17560 Striga asiatica HOM05D003498 ORTHO05D004191 1.1e-16 92.0 62 64.5
Atru.chr6.2501 Acer truncatum HOM05D003498 ORTHO05D004191 1.4e-16 91.7 80 57.5
arahy.Tifrunner.gnm1.ann1.MGT28Z Arachis hypogaea HOM05D003498 ORTHO05D004191 1.4e-16 91.7 63 65.1
Peaxi162Scf00147g01820 Petunia axillaris HOM05D003498 ORTHO05D004191 1.4e-16 91.7 62 66.1
TPR.G38988 Trifolium pratense HOM05D003498 ORTHO05D004191 1.4e-16 91.7 80 55.0
AagrBONN_evm.TU.Sc2ySwM_228.2546 Anthoceros agrestis HOM05D003498 ORTHO05D004191 1.9e-16 91.3 80 56.2
AT5G59440 Arabidopsis thaliana HOM05D003498 ORTHO05D004191 1.9e-16 91.3 62 64.5
arahy.Tifrunner.gnm1.ann1.82NANE Arachis hypogaea HOM05D003498 ORTHO05D004191 1.9e-16 91.3 62 66.1
Gohir.D11G173400 Gossypium hirsutum HOM05D003498 ORTHO05D004191 1.9e-16 91.3 81 55.6
Lalb_Chr10g0095001 Lupinus albus HOM05D003498 ORTHO05D004191 1.9e-16 91.3 80 56.2
Prupe.3G301400 Prunus persica HOM05D003498 ORTHO05D004191 1.9e-16 91.3 80 56.2
Rhsim08G0045600 Rhododendron simsii HOM05D003498 ORTHO05D004191 1.9e-16 91.3 62 64.5
arahy.Tifrunner.gnm1.ann1.IHQ30F Arachis hypogaea HOM05D003498 ORTHO05D004191 2.4e-16 90.9 64 64.1
Gohir.A07G076000 Gossypium hirsutum HOM05D003498 ORTHO05D004191 2.4e-16 90.9 81 54.3
Pp3c13_20320 Physcomitrium patens HOM05D003498 ORTHO05D004191 2.4e-16 90.9 76 59.2
BcaB08g36258 Brassica carinata HOM05D003498 ORTHO05D004191 3.2e-16 90.5 62 64.5
BcaC04g19772 Brassica carinata HOM05D003498 ORTHO05D004191 3.2e-16 90.5 62 64.5
A10p16650 Brassica napus HOM05D000758 ORTHO05D004191 3.2e-16 90.5 62 64.5
C09p51820 Brassica napus HOM05D000758 ORTHO05D001216 3.2e-16 90.5 62 64.5
BolC9t58046H Brassica oleracea HOM05D000758 ORTHO05D004191 3.2e-16 90.5 62 64.5
BraA10t43747Z Brassica rapa HOM05D003498 ORTHO05D004191 3.2e-16 90.5 62 64.5
CSS0032491 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 3.2e-16 90.5 62 64.5
Ca_01840_v3 Cicer arietinum L. HOM05D003498 ORTHO05D004191 3.2e-16 90.5 80 55.0
Oeu001847.2 Olea europaea HOM05D003498 ORTHO05D004191 3.2e-16 90.5 76 53.9
Potri.001G334900 Populus trichocarpa HOM05D003498 ORTHO05D004191 3.2e-16 90.5 80 56.2
vmacro05933 Vaccinium macrocarpon HOM05D003498 ORTHO05D004191 3.2e-16 90.5 62 64.5
HPP92_003500 Vanilla planifolia HOM05D003498 ORTHO05D004191 3.2e-16 90.5 62 64.5
HPP92_026896 Vanilla planifolia HOM05D003498 ORTHO05D004191 3.2e-16 90.5 62 64.5
VMungo1080G1345 Vigna mungo HOM05D003498 ORTHO05D004191 3.2e-16 90.5 80 55.0
arahy.Tifrunner.gnm1.ann1.C6G3CE Arachis hypogaea HOM05D003498 ORTHO05D004191 4.1e-16 90.1 62 64.5
EL10Ac9g22898 Beta vulgaris HOM05D003498 ORTHO05D004191 4.1e-16 90.1 62 64.5
AUR62012870 Chenopodium quinoa HOM05D003498 ORTHO05D004191 4.1e-16 90.1 81 51.9
Psat5g244520 Pisum sativum HOM05D003498 ORTHO05D004191 4.1e-16 90.1 80 55.0
Rhsim10G0009900 Rhododendron simsii HOM05D003498 ORTHO05D004191 4.1e-16 90.1 62 64.5
AUR62003275 Chenopodium quinoa HOM05D003498 ORTHO05D004191 5.4e-16 89.7 62 61.3
Haze_21315 Corylus avellana HOM05D003498 ORTHO05D004191 5.4e-16 89.7 80 53.8
Nitab4.5_0005699g0040 Nicotiana tabacum HOM05D003498 ORTHO05D004191 5.4e-16 89.7 62 64.5
Peaxi162Scf00776g00325 Petunia axillaris HOM05D003498 ORTHO05D004191 5.4e-16 89.7 62 64.5
Phvul.005G072200 Phaseolus vulgaris HOM05D003498 ORTHO05D004191 5.4e-16 89.7 80 55.0
Sc07g0003610 Simmondsia chinensis HOM05D003498 ORTHO05D004191 5.4e-16 89.7 80 56.2
Actinidia05930 Actinidia chinensis HOM05D003498 ORTHO05D004191 7.1e-16 89.4 62 62.9
MSTRG.15556 Avicennia marina HOM05D003498 ORTHO05D004191 7.1e-16 89.4 62 62.9
ECA238G3044 Erigeron canadensis HOM05D003498 ORTHO05D004191 7.1e-16 89.4 62 62.9
Manes.14G170700 Manihot esculenta HOM05D003498 ORTHO05D004191 7.1e-16 89.4 80 55.0
Prupe.3G071800 Prunus persica HOM05D003498 ORTHO05D004191 7.1e-16 89.4 80 55.0
Sabra16G0216000 Salix brachista HOM05D003498 ORTHO05D004191 7.1e-16 89.4 62 62.9
Sed0009078 Sechium edule HOM05D003498 ORTHO05D004191 7.1e-16 89.4 80 53.8
Dinv33373 Davidia involucrata HOM05D003498 ORTHO05D004191 9.2e-16 89.0 62 62.9
Lj1g0028146 Lotus japonicus HOM05D003498 ORTHO05D004191 9.2e-16 89.0 80 56.2
Lj5g0005525 Lotus japonicus HOM05D003498 ORTHO05D004191 9.2e-16 89.0 76 55.3
Manes.14G169300 Manihot esculenta HOM05D003498 ORTHO05D004191 9.2e-16 89.0 80 53.8
Hund09045 Selenicereus undatus HOM05D003498 ORTHO05D004191 9.2e-16 89.0 80 52.5
Actinidia38210 Actinidia chinensis HOM05D003498 ORTHO05D004191 1.2e-15 88.6 62 62.9
Ah.01g001720 Amaranthus hybridus HOM05D003498 ORTHO05D004191 1.2e-15 88.6 62 62.9
CSS0025632 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 1.2e-15 88.6 62 61.3
Carub.0008s2011 Capsella rubella HOM05D003498 ORTHO05D004191 1.2e-15 88.6 62 62.9
Cc07_g00530 Coffea canephora HOM05D003498 ORTHO05D004191 1.2e-15 88.6 62 62.9
DCAR_027394 Daucus carota HOM05D003498 ORTHO05D004191 1.2e-15 88.6 62 62.9
Lsat_1_v5_gn_2_93800 Lactuca sativa HOM05D003498 ORTHO05D004191 1.2e-15 88.6 62 62.9
Sp6g21120 Schrenkiella parvula HOM05D003498 ORTHO05D004191 1.2e-15 88.6 62 62.9
PGSC0003DMG400006157 Solanum tuberosum HOM05D003498 ORTHO05D004191 1.2e-15 88.6 71 56.3
Aa31LG1G11800 Aethionema arabicum HOM05D003498 ORTHO05D004191 1.6e-15 88.2 62 62.9
AL8G35910 Arabidopsis lyrata HOM05D003498 ORTHO05D004191 1.6e-15 88.2 62 61.3
Cpa.g.sc802.1 Carica papaya HOM05D003498 ORTHO05D004191 1.6e-15 88.2 62 62.9
Cfa012954 Carpinus fangiana HOM05D002694 ORTHO05D002927 1.6e-15 88.2 62 62.9
CiPaw.08G003000 Carya illinoinensis HOM05D003498 ORTHO05D004191 1.6e-15 88.2 80 53.8
AUR62017642 Chenopodium quinoa HOM05D003498 ORTHO05D004191 1.6e-15 88.2 62 59.7
Haze_25285 Corylus avellana HOM05D003498 ORTHO05D004191 1.6e-15 88.2 68 58.8
TWI36G0082 Tripterygium wilfordii HOM05D003498 ORTHO05D004191 1.6e-15 88.2 81 53.1
CAN.G1461.1 Capsicum annuum HOM05D003498 ORTHO05D004191 2.1e-15 87.8 62 62.9
CDE09G0325 Ceratophyllum demersum HOM05D003498 ORTHO05D004191 2.1e-15 87.8 62 62.9
CsaV3_4G001780 Cucumis sativus L. HOM05D003498 ORTHO05D004191 2.1e-15 87.8 81 51.9
Migut.K01441 Erythranthe guttata HOM05D003498 ORTHO05D004191 2.1e-15 87.8 62 61.3
MCO11G310 Micromonas commoda HOM05D003498 ORTHO05D004191 2.1e-15 87.8 87 55.2
CARHR285810 Cardamine hirsuta HOM05D003498 ORTHO05D004191 2.7e-15 87.4 62 61.3
AUR62042988 Chenopodium quinoa HOM05D003498 ORTHO05D004191 2.7e-15 87.4 62 59.7
ClCG07G012360 Citrullus lanatus HOM05D003498 ORTHO05D004191 2.7e-15 87.4 80 53.8
Cc06_g23000 Coffea canephora HOM05D003498 ORTHO05D004191 2.7e-15 87.4 81 54.3
TPR.G22201 Trifolium pratense HOM05D003498 ORTHO05D004191 2.7e-15 87.4 74 52.7
Thhalv10014606m.g Eutrema salsugineum HOM05D003498 ORTHO05D004191 3.5e-15 87.0 62 61.3
Gorai.001G085600 Gossypium raimondii HOM05D003498 ORTHO05D004191 3.5e-15 87.0 81 55.6
HanXRQChr14g0428161 Helianthus annuus HOM05D003498 ORTHO05D004191 3.5e-15 87.0 62 62.9
HanXRQChr14g0450941 Helianthus annuus HOM05D003498 ORTHO05D004191 3.5e-15 87.0 62 61.3
Actinidia18419 Actinidia chinensis HOM05D003498 ORTHO05D004191 4.6e-15 86.7 73 54.8
QL02p008668 Quercus lobata HOM05D003498 ORTHO05D004191 4.6e-15 86.7 81 53.1
CBR_g30299 Chara braunii HOM05D003498 ORTHO05D004191 6.0e-15 86.3 62 58.1
CBR_g50851 Chara braunii HOM05D003498 ORTHO05D004191 6.0e-15 86.3 62 58.1
AUR62033715 Chenopodium quinoa HOM05D003498 ORTHO05D004191 6.0e-15 86.3 62 58.1
Lsat_1_v5_gn_2_32401 Lactuca sativa HOM05D003498 ORTHO05D004191 6.0e-15 86.3 62 61.3
AUR62012113 Chenopodium quinoa HOM05D003498 ORTHO05D004191 1.0e-14 85.5 85 50.6
PRCOL_00002439 Prasinoderma coloniale HOM05D003498 ORTHO05D004191 1.7e-14 84.7 80 52.5
SMO265G0021 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 1.9e-13 81.3 131 49.6
Haze_27494 Corylus avellana HOM05D003498 ORTHO05D004191 2.1e-12 77.8 79 49.4
TPR.G23191 Trifolium pratense HOM05D003498 ORTHO05D005148 3.6e-12 77.0 60 55.0
Manes.06G007550 Manihot esculenta HOM05D003498 ORTHO05D004191 4.7e-12 76.6 62 56.5
SMO203G0202 Selaginella moellendorffii HOM05D003498 ORTHO05D006193 1.3e-09 68.6 35 91.4
Zm00001eb248420 Zea mays HOM05D003498 ORTHO05D004191 2.2e-09 67.8 35 82.9
QL02p026417 Quercus lobata HOM05D003498 ORTHO05D004191 3.8e-09 67.0 41 75.6
Zm00001eb208950 Zea mays HOM05D003498 ORTHO05D004191 6.4e-09 66.2 35 80.0
TPR.G16146 Trifolium pratense HOM05D003498 ORTHO05D004191 1.9e-08 64.7 54 53.7
Zm00001eb311360 Zea mays HOM05D003498 ORTHO05D004191 2.4e-08 64.3 35 80.0
Cre03.g190750 Chlamydomonas reinhardtii HOM05D003498 ORTHO05D004191 3.2e-08 63.9 74 50.0
Medtr0271s0030 Medicago truncatula HOM05D003498 ORTHO05D004191 3.2e-08 63.9 35 77.1
CSS0031931 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 4.1e-08 63.5 35 77.1
Cre03.g190800 Chlamydomonas reinhardtii HOM05D003498 ORTHO05D004191 4.1e-08 63.5 65 49.2
Atru.chr9.861 Acer truncatum HOM05D003498 ORTHO05D037953 9.2e-08 62.4 35 77.1
AUR62043688 Chenopodium quinoa HOM05D003498 ORTHO05D004191 9.2e-08 62.4 35 74.3
BcaC05g26822 Brassica carinata HOM05D003498 ORTHO05D004191 1.0e-06 58.9 39 66.7
Cfa023828 Carpinus fangiana HOM05D003498 ORTHO05D004191 1.7e-06 58.2 79 39.2
CiPaw.07G235500 Carya illinoinensis HOM05D003498 ORTHO05D004191 3.9e-06 57.0 52 53.8
Lalb_Chr01g0016871 Lupinus albus HOM05D003498 ORTHO05D004191 6.6e-06 56.2 35 71.4
Ciclev10026903m.g Citrus clementina HOM05D003498 ORTHO05D037953 8.7e-06 55.8 33 69.7


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