Gene: Sopen07g024440

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen07g024440
  • Transcript Identifier Sopen07g024440.2
  • Gene Type Coding gene
  • Location Spenn-ch07 : 69846108-69853598 : negative

Gene Family Information

  • ID HOM05D003498
  • #Genes/#Species 195/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen07g024440.2

Descriptions

  • Description Encodes thymidylate kinase which exists in two isoforms in plants. The longer variant of 263 amino acids with a N-terminal extension that is required for localization to the mitochondrion. The second isoform of 224 residues is localized to the cytoplasm and nucleoplasm. Peak of expression occurs during G1/S phase transition. | ZEUS1 (ZEU1) | FUNCTIONS IN: thymidylate kinase activity, ATP binding | INVOLVED IN: dTDP biosynthetic process | LOCATED IN: nucleoplasm, mitochondrion, cytoplasm | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Thymidylate kinase , Thymidylate kinase-like , Thymidylate kinase, conserved site
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006233
IEA
InterProdTDP biosynthetic process
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT5G59440

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004798
IEA
InterProthymidylate kinase activity
GO:0005524
IEA
InterProATP binding
GO:0003824
IEA
InterProcatalytic activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G59440
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT5G59440
GO:0005654
ISO
PLAZA Integrative Orthologynucleoplasm AT5G59440

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR018094 Thymidylate kinase
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR039430 Thymidylate kinase-like domain
IPR023144 Phenylalanine ammonia-lyase, shielding domain superfamily
IPR008948 L-Aspartase-like
Mapman id Description
6.3.2.3 Nucleotide metabolism.deoxynucleotides.salvage pathway.thymidylate kinase