Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO203G0177 Selaginella moellendorffii HOM05D004953 ORTHO05D006193 5.0e-213 744.2 379 100.0
SMO203G0202 Selaginella moellendorffii HOM05D003498 ORTHO05D006193 3.6e-102 375.9 397 59.7
SMO201G0221 Selaginella moellendorffii HOM05D004953 ORTHO05D006193 2.8e-62 243.4 326 49.4
Mapoly0032s0035 Marchantia polymorpha HOM05D004953 ORTHO05D006193 1.2e-22 111.7 160 43.8
SMO201G0123 Selaginella moellendorffii HOM05D003498 ORTHO05D004191 1.1e-18 98.6 139 48.2
SEGI_29467 Sequoiadendron giganteum HOM05D004953 ORTHO05D006193 3.9e-16 90.1 429 25.9
Pp3c2_410 Physcomitrium patens HOM05D004953 ORTHO05D006193 5.6e-15 86.3 149 38.3
Manes.13G056300 Manihot esculenta HOM05D004953 ORTHO05D006193 9.9e-12 75.5 176 30.1
Migut.D00772 Erythranthe guttata HOM05D004953 ORTHO05D006193 1.3e-11 75.1 315 25.7
THA.LOC104819011 Tarenaya hassleriana HOM05D004953 ORTHO05D006193 2.2e-11 74.3 321 24.6
Solyc09g042760.2 Solanum lycopersicum HOM05D004953 ORTHO05D006193 4.9e-11 73.2 319 22.6
TWI36G1252 Tripterygium wilfordii HOM05D004953 ORTHO05D006193 4.9e-11 73.2 339 24.2
Cfa010574 Carpinus fangiana HOM05D004953 ORTHO05D006193 6.4e-11 72.8 313 24.9
Dinv28790 Davidia involucrata HOM05D004953 ORTHO05D006193 8.4e-11 72.4 168 30.4
CAN.G1468.3 Capsicum annuum HOM05D004953 ORTHO05D006193 1.1e-10 72.0 319 24.5
Oeu013420.1 Olea europaea HOM05D004953 ORTHO05D006193 1.9e-10 71.2 147 32.7
SalBow3G1227 Salvia bowleyana HOM05D004953 ORTHO05D006193 1.9e-10 71.2 315 25.4
Sopen09g015810 Solanum pennellii HOM05D004953 ORTHO05D006193 1.9e-10 71.2 318 23.0
vmacro02841 Vaccinium macrocarpon HOM05D004953 ORTHO05D006193 1.9e-10 71.2 173 30.6
CiPaw.13G055800 Carya illinoinensis HOM05D004953 ORTHO05D006193 2.4e-10 70.9 174 30.5
CDE07G1537 Ceratophyllum demersum HOM05D004953 ORTHO05D006193 2.4e-10 70.9 187 31.6
AUR62008065 Chenopodium quinoa HOM05D004953 ORTHO05D006193 2.4e-10 70.9 395 23.0
TAR365G0304 Trochodendron aralioides HOM05D004953 ORTHO05D006193 2.4e-10 70.9 316 23.7
Actinidia04690 Actinidia chinensis HOM05D004953 ORTHO05D006193 3.2e-10 70.5 152 30.3
Rhsim13G0055000 Rhododendron simsii HOM05D004953 ORTHO05D006193 4.2e-10 70.1 175 30.9
CSS0005222 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 5.4e-10 69.7 173 30.1
CSS0012001 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 5.4e-10 69.7 173 30.1
Ca_08034_v3 Cicer arietinum L. HOM05D004953 ORTHO05D006193 5.4e-10 69.7 311 24.4
Cc01_g15850 Coffea canephora HOM05D004953 ORTHO05D006193 5.4e-10 69.7 172 30.2
Hund02809 Selenicereus undatus HOM05D004953 ORTHO05D006193 5.4e-10 69.7 147 29.9
Nitab4.5_0008926g0010 Nicotiana tabacum HOM05D004953 ORTHO05D006193 7.1e-10 69.3 319 23.5
GSVIVG01001528001 Vitis vinifera HOM05D004953 ORTHO05D006193 7.1e-10 69.3 172 30.2
Haze_03508 Corylus avellana HOM05D004953 ORTHO05D006193 1.2e-09 68.6 385 22.6
Medtr7g080880 Medicago truncatula HOM05D004953 ORTHO05D006193 1.2e-09 68.6 308 25.0
Peaxi162Scf02239g00020 Petunia axillaris HOM05D004953 ORTHO05D006193 1.2e-09 68.6 316 22.8
Sc17g0001570 Simmondsia chinensis HOM05D004953 ORTHO05D006193 1.6e-09 68.2 169 28.4
Duzib133G0915 Durio zibethinus HOM05D004953 ORTHO05D006193 2.1e-09 67.8 322 24.2
Gohir.D11G150400 Gossypium hirsutum HOM05D004953 ORTHO05D006193 2.1e-09 67.8 322 23.6
Gorai.007G161300 Gossypium raimondii HOM05D004953 ORTHO05D006193 2.1e-09 67.8 322 23.6
unitig_52.g16794 Utricularia gibba HOM05D004953 ORTHO05D006193 2.1e-09 67.8 168 31.5
AT5G48390 Arabidopsis thaliana HOM05D004953 ORTHO05D006193 2.7e-09 67.4 325 23.1
Lsat_1_v5_gn_8_98501 Lactuca sativa HOM05D004953 ORTHO05D006193 2.7e-09 67.4 173 30.6
Nitab4.5_0000038g0380 Nicotiana tabacum HOM05D004953 ORTHO05D006193 2.7e-09 67.4 323 23.2
Sabra14G0134100 Salix brachista HOM05D004953 ORTHO05D006193 2.7e-09 67.4 175 32.0
PGSC0003DMG400021911 Solanum tuberosum HOM05D004953 ORTHO05D006193 2.7e-09 67.4 319 22.6
C07p39140 Brassica napus HOM05D004953 ORTHO05D006193 3.5e-09 67.0 314 23.9
BolC7t44434H Brassica oleracea HOM05D004953 ORTHO05D006193 3.5e-09 67.0 314 23.9
CsaV3_2G009520 Cucumis sativus L. HOM05D004953 ORTHO05D006193 3.5e-09 67.0 317 24.6
Lj2C1111T4 Lonicera japonica HOM05D004953 ORTHO05D006193 3.5e-09 67.0 146 30.8
AL8G21200 Arabidopsis lyrata HOM05D004953 ORTHO05D006193 4.6e-09 66.6 325 23.1
A06p39200 Brassica napus HOM05D004953 ORTHO05D006193 4.6e-09 66.6 314 23.9
Thhalv10005371m.g Eutrema salsugineum HOM05D004953 ORTHO05D006193 6.0e-09 66.2 322 23.6
RcHm_v2.0_Chr6g0282191 Rosa chinensis HOM05D004953 ORTHO05D006193 6.0e-09 66.2 173 29.5
Ciclev10018269m.g Citrus clementina HOM05D004953 ORTHO05D006193 7.9e-09 65.9 170 28.8
Lj1g0025378 Lotus japonicus HOM05D004953 ORTHO05D006193 7.9e-09 65.9 315 23.5
Glyma.18G246600 Glycine max HOM05D004953 ORTHO05D006193 1.0e-08 65.5 314 23.6
Gohir.A11G144000 Gossypium hirsutum HOM05D004953 ORTHO05D006193 1.0e-08 65.5 322 23.6
Sp2g18750 Schrenkiella parvula HOM05D004953 ORTHO05D006193 1.0e-08 65.5 173 29.5
AUR62028642 Chenopodium quinoa HOM05D004953 ORTHO05D006193 1.3e-08 65.1 151 29.1
FAN27G2958 Fragaria x ananassa HOM05D004953 ORTHO05D006193 1.3e-08 65.1 173 30.6
Potri.014G175350 Populus trichocarpa HOM05D004953 ORTHO05D006193 1.8e-08 64.7 326 23.9
CARHR183800 Cardamine hirsuta HOM05D004953 ORTHO05D006193 3.0e-08 63.9 325 23.4
ClCG11G010960 Citrullus lanatus HOM05D004953 ORTHO05D006193 3.0e-08 63.9 310 23.9
MELO3C008751.2 Cucumis melo HOM05D004953 ORTHO05D006193 3.0e-08 63.9 317 24.3
Thecc.01G207300 Theobroma cacao HOM05D004953 ORTHO05D006193 3.0e-08 63.9 176 30.1
EL10Ac5g10584 Beta vulgaris HOM05D004953 ORTHO05D006193 3.9e-08 63.5 327 22.6
MBI10_g23576_MAGBIO Magnolia biondii HOM05D004953 ORTHO05D006193 5.1e-08 63.2 168 30.4
HanXRQChr12g0363951 Helianthus annuus HOM05D004953 ORTHO05D006193 6.7e-08 62.8 173 28.9
QL09p045412 Quercus lobata HOM05D004953 ORTHO05D006193 6.7e-08 62.8 165 30.9
FAN15G1962 Fragaria x ananassa HOM05D004953 ORTHO05D006193 8.7e-08 62.4 174 29.3
TPR.G35843 Trifolium pratense HOM05D004953 ORTHO05D006193 8.7e-08 62.4 319 23.2
Psat3g100880 Pisum sativum HOM05D004953 ORTHO05D006193 1.5e-07 61.6 146 30.1
CANSAT01G2219 Cannabis sativa HOM05D004953 ORTHO05D006193 1.9e-07 61.2 173 28.3
SHI10219 Sapria himalayana HOM05D004953 ORTHO05D006193 1.9e-07 61.2 176 26.7
Sed0015090 Sechium edule HOM05D004953 ORTHO05D006193 1.9e-07 61.2 300 23.3
VMungo1383G3652 Vigna mungo HOM05D004953 ORTHO05D006193 1.9e-07 61.2 170 26.5
Carub.0008s0798 Capsella rubella HOM05D004953 ORTHO05D006193 2.5e-07 60.8 322 23.3
Actinidia33396 Actinidia chinensis HOM05D004953 ORTHO05D006193 3.3e-07 60.5 129 29.5
Aqoxy2G04177 Aquilegia oxysepala HOM05D004953 ORTHO05D006193 3.3e-07 60.5 193 26.4
Prupe.8G186900 Prunus persica HOM05D004953 ORTHO05D006193 3.3e-07 60.5 164 29.9
Eucgr.K00106 Eucalyptus grandis HOM05D004953 ORTHO05D006193 4.3e-07 60.1 171 29.2
SGA_v2.0_scaffold8G04488 Striga asiatica HOM05D004953 ORTHO05D006193 4.3e-07 60.1 309 24.3
COL.COLO4_34276 Corchorus olitorius HOM05D004953 ORTHO05D006193 5.6e-07 59.7 319 23.2
FvH4_2g17460 Fragaria vesca HOM05D004953 ORTHO05D006193 5.6e-07 59.7 173 28.9
FAN24G2388 Fragaria x ananassa HOM05D004953 ORTHO05D006193 5.6e-07 59.7 173 28.9
Phvul.008G050500 Phaseolus vulgaris HOM05D004953 ORTHO05D006193 9.6e-07 58.9 170 26.5
Lalb_Chr03g0040531 Lupinus albus HOM05D004953 ORTHO05D006193 1.6e-06 58.2 187 26.7
Aa31LG11G3580 Aethionema arabicum HOM05D004953 ORTHO05D006193 2.1e-06 57.8 169 29.0
Aa31LG11G8930 Aethionema arabicum HOM05D004953 ORTHO05D006193 2.1e-06 57.8 388 21.6
Nn1g09452 Nelumbo nucifera HOM05D004953 ORTHO05D006193 2.1e-06 57.8 168 26.8
Sed0024263 Sechium edule HOM05D004953 ORTHO05D006193 2.1e-06 57.8 317 23.0
ECA236G0268 Erigeron canadensis HOM05D004953 ORTHO05D006193 2.8e-06 57.4 171 29.2
arahy.Tifrunner.gnm1.ann1.57Z9Z9 Arachis hypogaea HOM05D004953 ORTHO05D006193 6.2e-06 56.2 170 31.2
MD05G1153500 Malus domestica HOM05D004953 ORTHO05D006193 6.2e-06 56.2 174 25.3


User provided reference genes

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