Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO203G0145 Selaginella moellendorffii HOM05D005750 ORTHO05D007126 9.5e-92 340.1 167 100.0
Pp3c7_8520 Physcomitrium patens HOM05D005750 ORTHO05D007126 4.6e-54 214.9 170 60.0
AagrBONN_evm.TU.Sc2ySwM_344.3267 Anthoceros agrestis HOM05D005750 ORTHO05D007126 3.9e-53 211.8 172 59.3
SEGI_00199 Sequoiadendron giganteum HOM05D005750 ORTHO05D007126 3.9e-53 211.8 170 58.8
PSO339G6575 Papaver somniferum HOM05D005750 ORTHO05D007126 1.1e-52 210.3 170 60.6
PSO384G4196 Papaver somniferum HOM05D005750 ORTHO05D007126 1.1e-52 210.3 170 60.6
CBR_g865 Chara braunii HOM05D005750 ORTHO05D007126 1.9e-52 209.5 170 56.5
TAR636G2178 Trochodendron aralioides HOM05D005750 ORTHO05D007126 2.1e-51 206.1 170 60.0
Dinv37089 Davidia involucrata HOM05D005750 ORTHO05D007126 6.2e-51 204.5 170 60.0
Ciclev10012396m.g Citrus clementina HOM05D005750 ORTHO05D007126 1.1e-50 203.8 170 60.6
AL5G35150 Arabidopsis lyrata HOM05D005750 ORTHO05D007126 1.4e-50 203.4 170 58.2
vmacro20231 Vaccinium macrocarpon HOM05D005750 ORTHO05D007126 1.4e-50 203.4 170 59.4
AT3G54130 Arabidopsis thaliana HOM05D005750 ORTHO05D007126 1.8e-50 203.0 170 58.2
CARHR164010 Cardamine hirsuta HOM05D005750 ORTHO05D007126 1.8e-50 203.0 173 59.0
Aqoxy1G00732 Aquilegia oxysepala HOM05D005750 ORTHO05D007126 2.4e-50 202.6 171 57.9
C04p38380 Brassica napus HOM05D005750 ORTHO05D007126 2.4e-50 202.6 171 59.1
BcaC02g09095 Brassica carinata HOM05D005750 ORTHO05D007126 3.1e-50 202.2 171 59.1
BolC4t25415H Brassica oleracea HOM05D005750 ORTHO05D007126 3.1e-50 202.2 171 59.1
Carub.0005s2072 Capsella rubella HOM05D005750 ORTHO05D007126 3.1e-50 202.2 171 59.6
MD04G1146200 Malus domestica HOM05D005750 ORTHO05D007126 4.0e-50 201.8 170 60.0
BcaB02g08472 Brassica carinata HOM05D005750 ORTHO05D007126 5.3e-50 201.4 172 58.7
Nitab4.5_0000119g0240 Nicotiana tabacum HOM05D005750 ORTHO05D007126 5.3e-50 201.4 170 59.4
Thhalv10010608m.g Eutrema salsugineum HOM05D005750 ORTHO05D007126 6.9e-50 201.1 170 58.2
SGA_v2.0_scaffold240G44116 Striga asiatica HOM05D005750 ORTHO05D007126 6.9e-50 201.1 170 57.1
Zm00001eb367490 Zea mays HOM05D005750 ORTHO05D007126 6.9e-50 201.1 174 56.9
Ah.11g045300 Amaranthus hybridus HOM05D005750 ORTHO05D007126 9.0e-50 200.7 170 58.2
A04p05670 Brassica napus HOM05D005750 ORTHO05D007126 9.0e-50 200.7 170 57.6
Cpa.g.sc56.104 Carica papaya HOM05D005750 ORTHO05D007126 9.0e-50 200.7 170 58.2
Prupe.6G269800 Prunus persica HOM05D005750 ORTHO05D007126 9.0e-50 200.7 170 59.4
Sp5g08260 Schrenkiella parvula HOM05D005750 ORTHO05D007126 9.0e-50 200.7 170 59.4
Aa31sc171G20 Aethionema arabicum HOM05D005750 ORTHO05D007126 1.2e-49 200.3 170 58.2
Atru.chr8.2137 Acer truncatum HOM05D005750 ORTHO05D007126 1.5e-49 199.9 170 59.4
Duzib093G0788 Durio zibethinus HOM05D005750 ORTHO05D007126 1.5e-49 199.9 170 58.8
DCAR_028833 Daucus carota HOM05D005750 ORTHO05D007126 2.0e-49 199.5 170 58.8
MD12G1159400 Malus domestica HOM05D005750 ORTHO05D007126 2.6e-49 199.1 170 59.4
CiPaw.09G205200 Carya illinoinensis HOM05D005750 ORTHO05D007126 3.4e-49 198.7 170 60.0
Os01g0851400 Oryza sativa ssp. japonica HOM05D005750 ORTHO05D007126 3.4e-49 198.7 172 56.4
unitig_46.g18409 Utricularia gibba HOM05D005750 ORTHO05D007126 3.4e-49 198.7 170 58.2
Duzib128G1738 Durio zibethinus HOM05D005750 ORTHO05D007126 4.5e-49 198.4 170 58.8
Lsat_1_v5_gn_8_99481 Lactuca sativa HOM05D005750 ORTHO05D007126 4.5e-49 198.4 173 57.8
TWI74G1070 Tripterygium wilfordii HOM05D005750 ORTHO05D007126 4.5e-49 198.4 170 58.2
THA.LOC104823389 Tarenaya hassleriana HOM05D005750 ORTHO05D007126 5.8e-49 198.0 172 57.6
BraA04t16263Z Brassica rapa HOM05D005750 ORTHO05D007126 7.6e-49 197.6 170 57.1
ClCG10G021760 Citrullus lanatus HOM05D005750 ORTHO05D007126 7.6e-49 197.6 171 59.6
CANSAT35G0049 Cannabis sativa HOM05D005750 ORTHO05D007126 1.0e-48 197.2 170 58.8
Migut.J00232 Erythranthe guttata HOM05D005750 ORTHO05D007126 1.0e-48 197.2 170 57.1
CSS0046643 Camellia sinensis var. sinensis HOM05D005750 ORTHO05D007126 1.3e-48 196.8 170 57.1
CAN.G351.8 Capsicum annuum HOM05D005750 ORTHO05D007126 1.3e-48 196.8 170 58.2
MELO3C009196.2 Cucumis melo HOM05D005750 ORTHO05D007126 1.3e-48 196.8 171 58.5
CsaV3_3G034210 Cucumis sativus L. HOM05D005750 ORTHO05D007126 1.3e-48 196.8 171 58.5
Lalb_Chr07g0193351 Lupinus albus HOM05D005750 ORTHO05D007126 1.3e-48 196.8 171 59.1
arahy.Tifrunner.gnm1.ann1.CU0EG8 Arachis hypogaea HOM05D005750 ORTHO05D007126 1.7e-48 196.4 172 58.7
Thecc.05G023200 Theobroma cacao HOM05D005750 ORTHO05D007126 1.7e-48 196.4 170 58.8
Sopen10g036170 Solanum pennellii HOM05D005750 ORTHO05D007126 2.2e-48 196.1 170 58.2
SGA_v2.0_scaffold85G26769 Striga asiatica HOM05D005750 ORTHO05D007126 2.2e-48 196.1 170 56.5
MSTRG.26795 Avicennia marina HOM05D005750 ORTHO05D007126 2.9e-48 195.7 170 57.6
Gorai.002G260600 Gossypium raimondii HOM05D005750 ORTHO05D007126 2.9e-48 195.7 170 58.2
RcHm_v2.0_Chr3g0463971 Rosa chinensis HOM05D005750 ORTHO05D007126 2.9e-48 195.7 173 57.2
Actinidia13787 Actinidia chinensis HOM05D005750 ORTHO05D007126 3.8e-48 195.3 170 58.2
Sed0027096 Sechium edule HOM05D005750 ORTHO05D007126 3.8e-48 195.3 171 59.1
Dinv35517 Davidia involucrata HOM05D005750 ORTHO05D007126 4.9e-48 194.9 170 57.6
Gohir.A01G224900 Gossypium hirsutum HOM05D005750 ORTHO05D007126 4.9e-48 194.9 170 58.2
Gohir.D01G214500 Gossypium hirsutum HOM05D005750 ORTHO05D007126 4.9e-48 194.9 170 58.2
arahy.Tifrunner.gnm1.ann1.2Q187C Arachis hypogaea HOM05D005750 ORTHO05D007126 6.5e-48 194.5 172 58.7
A09p47130 Brassica napus HOM05D005750 ORTHO05D007126 6.5e-48 194.5 170 57.6
C08p29390 Brassica napus HOM05D005750 ORTHO05D007126 6.5e-48 194.5 170 56.5
BolC8t50540H Brassica oleracea HOM05D005750 ORTHO05D007126 6.5e-48 194.5 170 56.5
BraA09t40175Z Brassica rapa HOM05D005750 ORTHO05D007126 6.5e-48 194.5 170 57.6
Eucgr.B02764 Eucalyptus grandis HOM05D005750 ORTHO05D007126 6.5e-48 194.5 177 55.9
PGR031G0365 Punica granatum HOM05D005750 ORTHO05D007126 8.4e-48 194.1 182 54.4
GSVIVG01034019001 Vitis vinifera HOM05D005750 ORTHO05D007126 8.4e-48 194.1 170 55.9
EL10Ac5g11550 Beta vulgaris HOM05D005750 ORTHO05D007126 1.1e-47 193.7 172 56.4
BcaB01g00216 Brassica carinata HOM05D005750 ORTHO05D007126 1.1e-47 193.7 170 57.6
HanXRQChr16g0510541 Helianthus annuus HOM05D005750 ORTHO05D007126 1.1e-47 193.7 173 56.6
MBI14_g32934_MAGBIO Magnolia biondii HOM05D005750 ORTHO05D007126 1.1e-47 193.7 171 56.1
Lj2A78G34 Lonicera japonica HOM05D005750 ORTHO05D007126 1.4e-47 193.4 173 56.6
TAR623G1708 Trochodendron aralioides HOM05D005750 ORTHO05D007126 1.4e-47 193.4 170 54.7
CDE02G4717 Ceratophyllum demersum HOM05D005750 ORTHO05D007126 1.9e-47 193.0 170 55.9
Hma1.2p1_0763F.1_g214560 Hydrangea macrophylla HOM05D005750 ORTHO05D007126 1.9e-47 193.0 170 54.7
Manes.09G101500 Manihot esculenta HOM05D005750 ORTHO05D007126 3.2e-47 192.2 170 54.7
Cc06_g01740 Coffea canephora HOM05D005750 ORTHO05D007126 4.2e-47 191.8 170 55.9
Peaxi162Scf00014g00091 Petunia axillaris HOM05D005750 ORTHO05D007126 4.2e-47 191.8 170 55.9
Potri.016G110300 Populus trichocarpa HOM05D005750 ORTHO05D007126 4.2e-47 191.8 170 57.1
Glyma.01G110900 Glycine max HOM05D005750 ORTHO05D007126 5.5e-47 191.4 170 57.6
TWI53G0977 Tripterygium wilfordii HOM05D005750 ORTHO05D007126 5.5e-47 191.4 170 57.6
VMungo0331G1407 Vigna mungo HOM05D005750 ORTHO05D007126 5.5e-47 191.4 170 58.2
Psat7g247000 Pisum sativum HOM05D005750 ORTHO05D007126 7.1e-47 191.0 170 58.2
Lj3g0021719 Lotus japonicus HOM05D005750 ORTHO05D007126 1.2e-46 190.3 172 57.0
Phvul.010G008000 Phaseolus vulgaris HOM05D005750 ORTHO05D007126 1.2e-46 190.3 170 57.6
FvH4_6g12170 Fragaria vesca HOM05D005750 ORTHO05D007126 1.6e-46 189.9 173 55.5
FAN09G4178 Fragaria x ananassa HOM05D005750 ORTHO05D007126 1.6e-46 189.9 173 55.5
FAN14G0046 Fragaria x ananassa HOM05D005750 ORTHO05D007126 1.6e-46 189.9 173 55.5
FAN14G1750 Fragaria x ananassa HOM05D005750 ORTHO05D007126 1.6e-46 189.9 173 55.5
AUR62042943 Chenopodium quinoa HOM05D005750 ORTHO05D007126 3.5e-46 188.7 172 55.8
Hund15288 Selenicereus undatus HOM05D005750 ORTHO05D007126 3.5e-46 188.7 171 56.1
Zm00001eb147810 Zea mays HOM05D005750 ORTHO05D007126 4.6e-46 188.3 174 54.6
Sc01g0006740 Simmondsia chinensis HOM05D005750 ORTHO05D007126 7.9e-46 187.6 170 54.7
TPR.G5219 Trifolium pratense HOM05D005750 ORTHO05D007126 7.9e-46 187.6 170 55.9
FAN02G3889 Fragaria x ananassa HOM05D005750 ORTHO05D007126 1.3e-45 186.8 171 55.0
QL07p036167 Quercus lobata HOM05D005750 ORTHO05D007126 1.3e-45 186.8 181 53.6
Medtr4g014710 Medicago truncatula HOM05D005750 ORTHO05D007126 1.8e-45 186.4 170 55.9
Sed0026182 Sechium edule HOM05D005750 ORTHO05D007126 6.7e-45 184.5 168 56.0
Potri.006G095700 Populus trichocarpa HOM05D005750 ORTHO05D007126 8.7e-45 184.1 170 54.7
COL.COLO4_14617 Corchorus olitorius HOM05D005750 ORTHO05D007126 5.7e-44 181.4 194 50.0
Glyma.03G076500 Glycine max HOM05D005750 ORTHO05D007126 7.4e-44 181.0 185 53.5
Sabra16G0106800 Salix brachista HOM05D005750 ORTHO05D007126 1.8e-42 176.4 194 50.5
Cre11.g475450 Chlamydomonas reinhardtii HOM05D005750 ORTHO05D007126 4.1e-42 175.3 171 53.2
Oeu004613.2 Olea europaea HOM05D005750 ORTHO05D007126 6.9e-42 174.5 211 46.0
Rhsim05G0204700 Rhododendron simsii HOM05D005750 ORTHO05D007126 3.4e-41 172.2 198 48.5
Sabra06G0073600 Salix brachista HOM05D005750 ORTHO05D007126 4.5e-41 171.8 211 44.5
MCO10G202 Micromonas commoda HOM05D005750 ORTHO05D007126 4.2e-39 165.2 185 47.6
Haze_20940 Corylus avellana HOM05D005750 ORTHO05D007126 3.0e-37 159.1 170 49.4
TPR.G5190 Trifolium pratense HOM05D005750 ORTHO05D007126 1.5e-33 146.7 170 45.9
Gohir.D04G128250 Gossypium hirsutum HOM05D005750 ORTHO05D007126 6.5e-32 141.4 163 46.0
CiPaw.10G154000 Carya illinoinensis HOM05D005750 ORTHO05D007126 9.4e-31 137.5 129 55.8
Gorai.012G111300 Gossypium raimondii HOM05D005750 ORTHO05D007126 2.7e-30 136.0 163 45.4
Actinidia29137 Actinidia chinensis HOM05D005750 ORTHO05D007126 7.9e-30 134.4 135 53.3
HPP92_018186 Vanilla planifolia HOM05D005750 ORTHO05D007126 6.7e-29 131.3 173 43.9
Haze_26299 Corylus avellana HOM05D005750 ORTHO05D007126 2.6e-28 129.4 172 41.9
ECA236G1744 Erigeron canadensis HOM05D005750 ORTHO05D007126 3.3e-28 129.0 110 56.4
PRCOL_00002333 Prasinoderma coloniale HOM05D005750 ORTHO05D007126 2.6e-25 119.4 193 38.3
Nitab4.5_0006439g0020 Nicotiana tabacum HOM05D005750 ORTHO05D007126 4.5e-25 118.6 97 62.9
TAR402G0002 Trochodendron aralioides HOM05D005750 ORTHO05D007126 8.0e-22 107.8 91 60.4
Solyc10g086770.3 Solanum lycopersicum HOM05D005750 ORTHO05D007126 1.8e-21 106.7 92 55.4
Ca_23809_v3 Cicer arietinum L. HOM05D005750 ORTHO05D007126 2.3e-21 106.3 93 54.8
PGSC0003DMG400019130 Solanum tuberosum HOM05D005750 ORTHO05D007126 3.9e-21 105.5 92 54.3
Nn2g13588 Nelumbo nucifera HOM05D005750 ORTHO05D007126 8.8e-21 104.4 93 53.8
AUR62025787 Chenopodium quinoa HOM05D005750 ORTHO05D007126 1.5e-20 103.6 92 53.3
Ca_23812_v3 Cicer arietinum L. HOM05D005750 ORTHO05D007126 3.6e-14 82.4 76 57.9
ATR0618G451 Amborella trichopoda HOM05D005750 ORTHO05D007126 1.8e-13 80.1 47 76.6
Nn2g11345 Nelumbo nucifera HOM05D005750 ORTHO05D007126 3.3e-12 75.9 45 73.3
A04p05660 Brassica napus HOM05D005750 ORTHO05D007126 8.2e-11 71.2 42 71.4


User provided reference genes

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