Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO201G0179 Selaginella moellendorffii HOM05D005749 ORTHO05D007208 5.4e-99 364.4 193 100.0
MD04G1111300 Malus domestica HOM05D005749 ORTHO05D007208 1.7e-71 273.1 187 74.3
Aqoxy2G01923 Aquilegia oxysepala HOM05D005749 ORTHO05D007208 3.7e-71 271.9 184 77.2
Sc07g0006200 Simmondsia chinensis HOM05D005749 ORTHO05D007208 4.8e-71 271.6 187 73.3
FvH4_6g14940 Fragaria vesca HOM05D005749 ORTHO05D007208 6.3e-71 271.2 187 72.2
FAN14G3553 Fragaria x ananassa HOM05D005749 ORTHO05D007208 6.3e-71 271.2 187 72.2
MBI13_g05975_MAGBIO Magnolia biondii HOM05D005749 ORTHO05D007208 8.2e-71 270.8 188 72.9
PGSC0003DMG400017609 Solanum tuberosum HOM05D005749 ORTHO05D007208 2.4e-70 269.2 187 73.3
COL.COLO4_10301 Corchorus olitorius HOM05D005749 ORTHO05D007208 3.1e-70 268.9 187 72.7
Prupe.6G244800 Prunus persica HOM05D005749 ORTHO05D007208 3.1e-70 268.9 187 72.7
Dinv35687 Davidia involucrata HOM05D005749 ORTHO05D007208 4.1e-70 268.5 187 72.7
Solyc10g085980.2 Solanum lycopersicum HOM05D005749 ORTHO05D007208 5.3e-70 268.1 187 73.3
Sopen10g035350 Solanum pennellii HOM05D005749 ORTHO05D007208 5.3e-70 268.1 187 73.3
FAN02G1517 Fragaria x ananassa HOM05D005749 ORTHO05D007208 6.9e-70 267.7 187 71.1
ECA248G2107 Erigeron canadensis HOM05D005749 ORTHO05D007208 9.1e-70 267.3 188 75.5
Nitab4.5_0000754g0010 Nicotiana tabacum HOM05D005749 ORTHO05D007208 1.5e-69 266.5 187 72.7
SGA_v2.0_scaffold75G24898 Striga asiatica HOM05D005749 ORTHO05D007208 2.0e-69 266.2 187 73.3
Gohir.A01G218100 Gossypium hirsutum HOM05D005749 ORTHO05D007208 2.6e-69 265.8 187 71.7
HanXRQChr11g0349581 Helianthus annuus HOM05D005749 ORTHO05D007208 2.6e-69 265.8 185 75.1
Nitab4.5_0002073g0030 Nicotiana tabacum HOM05D005749 ORTHO05D007208 2.6e-69 265.8 187 72.7
FAN05G4959 Fragaria x ananassa HOM05D005749 ORTHO05D007208 3.4e-69 265.4 187 70.6
Actinidia11228 Actinidia chinensis HOM05D005749 ORTHO05D007208 4.5e-69 265.0 187 72.2
CAN.G933.18 Capsicum annuum HOM05D005749 ORTHO05D007208 4.5e-69 265.0 187 71.7
Ciclev10011952m.g Citrus clementina HOM05D005749 ORTHO05D007208 4.5e-69 265.0 187 71.7
FAN09G3437 Fragaria x ananassa HOM05D005749 ORTHO05D007208 4.5e-69 265.0 187 70.1
FAN09G4246 Fragaria x ananassa HOM05D005749 ORTHO05D007208 4.5e-69 265.0 187 70.1
unitig_27.g25368 Utricularia gibba HOM05D005749 ORTHO05D007208 4.5e-69 265.0 184 73.4
AUR62016425 Chenopodium quinoa HOM05D005749 ORTHO05D007208 5.9e-69 264.6 184 74.5
Cc06_g03360 Coffea canephora HOM05D005749 ORTHO05D007208 5.9e-69 264.6 184 74.5
Migut.J00398 Erythranthe guttata HOM05D005749 ORTHO05D007208 5.9e-69 264.6 187 72.7
Potri.006G133900 Populus trichocarpa HOM05D005749 ORTHO05D007208 5.9e-69 264.6 187 72.2
SalBow3G2006 Salvia bowleyana HOM05D005749 ORTHO05D007208 5.9e-69 264.6 189 72.0
TAR623G1622 Trochodendron aralioides HOM05D005749 ORTHO05D007208 7.7e-69 264.2 187 72.7
Gorai.002G252100 Gossypium raimondii HOM05D005749 ORTHO05D007208 1.0e-68 263.8 187 71.1
CSS0045869 Camellia sinensis var. sinensis HOM05D005749 ORTHO05D007208 1.3e-68 263.5 184 73.4
Hma1.2p1_0350F.1_g132660 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 1.3e-68 263.5 187 71.7
Thhalv10013777m.g Eutrema salsugineum HOM05D005749 ORTHO05D007208 1.7e-68 263.1 188 71.8
Thecc.05G051000 Theobroma cacao HOM05D005749 ORTHO05D007208 2.2e-68 262.7 188 72.3
GSVIVG01025567001 Vitis vinifera HOM05D005749 ORTHO05D007208 2.2e-68 262.7 187 72.2
Gohir.D01G207000 Gossypium hirsutum HOM05D005749 ORTHO05D007208 2.9e-68 262.3 187 71.1
AL6G22910 Arabidopsis lyrata HOM05D005749 ORTHO05D007208 5.0e-68 261.5 188 70.7
Duzib093G1962 Durio zibethinus HOM05D005749 ORTHO05D007208 5.0e-68 261.5 184 71.2
Pp3c12_18750 Physcomitrium patens HOM05D005749 ORTHO05D007208 6.5e-68 261.2 193 69.9
QL07p045817 Quercus lobata HOM05D005749 ORTHO05D007208 8.5e-68 260.8 187 71.1
Sp6g31500 Schrenkiella parvula HOM05D005749 ORTHO05D007208 8.5e-68 260.8 188 70.7
Eucgr.K03191 Eucalyptus grandis HOM05D005749 ORTHO05D007208 1.1e-67 260.4 184 72.3
THA.LOC104816307 Tarenaya hassleriana HOM05D005749 ORTHO05D007208 1.1e-67 260.4 187 71.1
C02p05630 Brassica napus HOM05D005749 ORTHO05D007208 1.4e-67 260.0 188 70.2
BolC2t06507H Brassica oleracea HOM05D005749 ORTHO05D007208 1.4e-67 260.0 188 70.2
PSO339G5588 Papaver somniferum HOM05D005749 ORTHO05D007208 1.4e-67 260.0 187 71.7
PSO384G0170 Papaver somniferum HOM05D005749 ORTHO05D007208 1.4e-67 260.0 187 71.7
AT5G12130 Arabidopsis thaliana HOM05D005749 ORTHO05D007208 1.9e-67 259.6 188 69.7
A02p01390 Brassica napus HOM05D005749 ORTHO05D007208 1.9e-67 259.6 188 70.2
RcHm_v2.0_Chr3g0468141 Rosa chinensis HOM05D005749 ORTHO05D007208 1.9e-67 259.6 187 69.0
BraA02t05118Z Brassica rapa HOM05D005749 ORTHO05D007208 3.2e-67 258.8 188 69.7
C09p64740 Brassica napus HOM05D005749 ORTHO05D007208 4.2e-67 258.5 188 70.2
BolC9t59305H Brassica oleracea HOM05D005749 ORTHO05D007208 4.2e-67 258.5 188 70.2
TPR.G35663 Trifolium pratense HOM05D005749 ORTHO05D007208 5.5e-67 258.1 187 70.6
BcaNung06325 Brassica carinata HOM05D005749 ORTHO05D007208 7.2e-67 257.7 188 69.7
PGR004G0882 Punica granatum HOM05D005749 ORTHO05D007208 7.2e-67 257.7 184 69.6
Aa31LG3G15070 Aethionema arabicum HOM05D005749 ORTHO05D007208 9.4e-67 257.3 188 69.7
Carub.0006s1064 Capsella rubella HOM05D005749 ORTHO05D007208 9.4e-67 257.3 182 72.0
CARHR200990 Cardamine hirsuta HOM05D005749 ORTHO05D007208 9.4e-67 257.3 188 69.7
A10p25670 Brassica napus HOM05D005749 ORTHO05D007208 1.2e-66 256.9 188 69.7
BraA10t44632Z Brassica rapa HOM05D005749 ORTHO05D007208 1.2e-66 256.9 188 69.7
Cfa017475 Carpinus fangiana HOM05D005749 ORTHO05D007208 1.2e-66 256.9 181 72.4
Ca_02301_v3 Cicer arietinum L. HOM05D005749 ORTHO05D007208 1.6e-66 256.5 187 70.1
Os05g0121200 Oryza sativa ssp. japonica HOM05D005749 ORTHO05D007208 1.6e-66 256.5 191 69.1
Haze_20679 Corylus avellana HOM05D005749 ORTHO05D007208 2.1e-66 256.1 186 71.5
Medtr1g067200 Medicago truncatula HOM05D005749 ORTHO05D007208 2.1e-66 256.1 187 70.1
DCAR_014958 Daucus carota HOM05D005749 ORTHO05D007208 3.6e-66 255.4 177 70.6
AagrBONN_evm.TU.Sc2ySwM_362.1198 Anthoceros agrestis HOM05D005749 ORTHO05D007208 1.0e-65 253.8 194 65.5
CiPaw.10G138600 Carya illinoinensis HOM05D005749 ORTHO05D007208 1.8e-65 253.1 187 69.0
Lalb_Chr20g0112991 Lupinus albus HOM05D005749 ORTHO05D007208 1.8e-65 253.1 187 69.0
Glyma.10G047600 Glycine max HOM05D005749 ORTHO05D007208 3.9e-65 251.9 187 67.4
Glyma.13G135400 Glycine max HOM05D005749 ORTHO05D007208 5.1e-65 251.5 187 67.9
RhsimUnG0120200 Rhododendron simsii HOM05D005749 ORTHO05D007208 6.7e-65 251.1 204 66.2
Lalb_Chr02g0153481 Lupinus albus HOM05D005749 ORTHO05D007208 8.8e-65 250.8 184 67.9
Mapoly0068s0066 Marchantia polymorpha HOM05D005749 ORTHO05D007208 8.8e-65 250.8 183 71.6
Lj5g0012474 Lotus japonicus HOM05D005749 ORTHO05D007208 1.1e-64 250.4 187 69.0
VMungo0720G0421 Vigna mungo HOM05D005749 ORTHO05D007208 1.1e-64 250.4 184 67.9
Zm00001eb265640 Zea mays HOM05D005749 ORTHO05D007208 1.1e-64 250.4 192 67.7
arahy.Tifrunner.gnm1.ann1.F15EJL Arachis hypogaea HOM05D005749 ORTHO05D007208 2.6e-64 249.2 187 67.4
CsaV3_4G024440 Cucumis sativus L. HOM05D005749 ORTHO05D007208 2.6e-64 249.2 188 67.6
Peaxi162Scf00146g01323 Petunia axillaris HOM05D005749 ORTHO05D007208 5.7e-64 248.1 185 70.3
Lj2A105T62 Lonicera japonica HOM05D005749 ORTHO05D007208 9.7e-64 247.3 198 66.2
MELO3C003076.2 Cucumis melo HOM05D005749 ORTHO05D007208 3.7e-63 245.4 188 67.0
ClCG04G008720 Citrullus lanatus HOM05D005749 ORTHO05D007208 1.2e-61 240.4 191 65.4
Zm00001eb355290 Zea mays HOM05D005749 ORTHO05D007208 4.5e-61 238.4 186 66.1
Lsat_1_v5_gn_1_53521 Lactuca sativa HOM05D005749 ORTHO05D007208 1.0e-60 237.3 185 71.4
vmacro20079 Vaccinium macrocarpon HOM05D005749 ORTHO05D007208 1.7e-60 236.5 231 58.9
HPP92_000647 Vanilla planifolia HOM05D005749 ORTHO05D007208 1.7e-60 236.5 189 64.0
HPP92_000699 Vanilla planifolia HOM05D005749 ORTHO05D007208 2.2e-60 236.1 189 64.0
ATR0594G051 Amborella trichopoda HOM05D005749 ORTHO05D007208 4.7e-58 228.4 157 73.2
Oeu029112.2 Olea europaea HOM05D000267 ORTHO05D000298 1.8e-57 226.5 191 66.0
MCO03G081 Micromonas commoda HOM05D005749 ORTHO05D007208 1.7e-55 219.9 194 57.2
Sed0002515 Sechium edule HOM05D005749 ORTHO05D007208 3.7e-55 218.8 161 68.3
CANSAT80G2775 Cannabis sativa HOM05D005749 ORTHO05D007208 5.3e-54 214.9 171 63.7
MCO03G201 Micromonas commoda HOM05D005749 ORTHO05D007208 9.1e-54 214.2 186 58.1
MD12G1129500 Malus domestica HOM05D005749 ORTHO05D007208 2.0e-53 213.0 166 68.1
Cre17.g712400 Chlamydomonas reinhardtii HOM05D005749 ORTHO05D007208 2.6e-53 212.6 191 59.7
PRCOL_00003295 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 7.7e-53 211.1 191 57.1
SEGI_07760 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 2.5e-51 206.1 137 76.6
Hund12066 Selenicereus undatus HOM05D005749 ORTHO05D007208 9.4e-51 204.1 187 66.8
arahy.Tifrunner.gnm1.ann1.R14JEG Arachis hypogaea HOM05D005749 ORTHO05D007208 1.2e-48 197.2 141 71.6
Actinidia19727 Actinidia chinensis HOM05D005749 ORTHO05D007208 2.0e-48 196.4 129 74.4
Manes.08G001100 Manihot esculenta HOM05D005749 ORTHO05D007208 2.0e-48 196.4 138 73.9
arahy.Tifrunner.gnm1.ann1.SNR3S1 Arachis hypogaea HOM05D005749 ORTHO05D007208 1.1e-46 190.7 326 39.3
arahy.Tifrunner.gnm1.ann1.V0P37H Arachis hypogaea HOM05D005749 ORTHO05D007208 4.1e-46 188.7 331 38.4
AUR62011608 Chenopodium quinoa HOM05D005749 ORTHO05D007208 4.5e-45 185.3 184 58.2
Sabra06G0105200 Salix brachista HOM05D005749 ORTHO05D007208 5.5e-43 178.3 228 48.7
Psat6g125120 Pisum sativum HOM05D005749 ORTHO05D007208 7.2e-43 177.9 124 74.2
EL10Ac7g17315 Beta vulgaris HOM05D005749 ORTHO05D007208 6.1e-42 174.9 203 52.2
Cpa.g.sc114.35 Carica papaya HOM05D005749 ORTHO05D007208 6.1e-42 174.9 114 79.8
Hma1.2p1_0350F.1_g132650 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 4.4e-40 168.7 119 71.4
PRCOL_00006447 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 7.5e-40 167.9 191 50.3
Ah.08g212020 Amaranthus hybridus HOM05D005749 ORTHO05D007208 7.2e-35 151.4 203 49.8
Hma1.2p1_0111F.1_g053580 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 1.2e-32 144.1 102 68.6
Atru.chr8.2516 Acer truncatum HOM05D005749 ORTHO05D007208 6.3e-31 138.3 100 71.0
PRCOL_00000418 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 8.9e-25 117.9 175 38.3
Lsat_1_v5_gn_1_79620 Lactuca sativa HOM05D005749 ORTHO05D007208 7.0e-22 108.2 90 64.4
CBR_g5606 Chara braunii HOM05D000019 ORTHO05D000002 9.2e-22 107.8 172 37.8
CDE09G0524 Ceratophyllum demersum HOM05D005749 ORTHO05D007208 6.6e-20 101.7 181 35.4
Phvul.007G161800 Phaseolus vulgaris HOM05D005749 ORTHO05D007208 4.4e-16 89.0 78 51.3
Dinv03750 Davidia involucrata HOM05D005749 ORTHO05D007208 8.6e-12 74.7 67 62.7
Cpa.g.sc114.34 Carica papaya HOM05D005749 ORTHO05D007208 1.5e-11 73.9 59 57.6
RcHm_v2.0_Chr2g0168111 Rosa chinensis HOM05D005749 ORTHO05D007208 5.6e-11 72.0 56 57.1
CBR_g41620 Chara braunii HOM05D005749 ORTHO05D007208 3.1e-09 66.2 61 54.1
Dinv06973 Davidia involucrata HOM05D005749 ORTHO05D007208 1.2e-08 64.3 36 86.1
MCO11G480 Micromonas commoda HOM05D005749 ORTHO05D007208 4.1e-06 55.8 127 27.6


User provided reference genes

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