Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO200G0124 Selaginella moellendorffii HOM05D007304 ORTHO05D009233 7.2e-74 280.4 134 100.0
Sed0026932 Sechium edule HOM05D007304 ORTHO05D009233 2.0e-44 182.6 134 56.0
Ah.07g202740 Amaranthus hybridus HOM05D007304 ORTHO05D009233 5.9e-44 181.0 134 57.5
TPR.G8829 Trifolium pratense HOM05D007304 ORTHO05D009233 7.7e-44 180.6 134 57.5
Lalb_Chr06g0162071 Lupinus albus HOM05D007304 ORTHO05D009233 1.7e-43 179.5 134 56.0
CsaV3_2G033470 Cucumis sativus L. HOM05D007304 ORTHO05D009233 2.3e-43 179.1 134 56.7
Hund27084 Selenicereus undatus HOM05D007304 ORTHO05D009233 2.9e-43 178.7 134 57.5
Gorai.005G074700 Gossypium raimondii HOM05D007304 ORTHO05D009233 3.8e-43 178.3 134 56.7
Lj5g0021067 Lotus japonicus HOM05D007304 ORTHO05D009233 3.8e-43 178.3 134 56.0
arahy.Tifrunner.gnm1.ann1.W17VPE Arachis hypogaea HOM05D007304 ORTHO05D009233 5.0e-43 177.9 134 56.7
MSTRG.22445 Avicennia marina HOM05D007304 ORTHO05D009233 5.0e-43 177.9 134 56.0
CSS0049262 Camellia sinensis var. sinensis HOM05D007304 ORTHO05D009233 5.0e-43 177.9 134 56.7
MELO3C008119.2 Cucumis melo HOM05D007304 ORTHO05D009233 6.6e-43 177.6 134 56.0
COL.COLO4_22675 Corchorus olitorius HOM05D007304 ORTHO05D009233 8.6e-43 177.2 134 55.2
PGR102G2268 Punica granatum HOM05D007304 ORTHO05D009233 8.6e-43 177.2 134 56.7
Medtr1g096340 Medicago truncatula HOM05D007304 ORTHO05D009233 1.1e-42 176.8 134 55.2
Phvul.007G089900 Phaseolus vulgaris HOM05D007304 ORTHO05D009233 1.1e-42 176.8 134 57.5
GSVIVG01034475001 Vitis vinifera HOM05D007304 ORTHO05D009233 1.1e-42 176.8 134 56.7
Zm00001eb063940 Zea mays HOM05D007304 ORTHO05D009233 1.1e-42 176.8 133 57.9
arahy.Tifrunner.gnm1.ann1.E78XAF Arachis hypogaea HOM05D007304 ORTHO05D009233 1.5e-42 176.4 134 56.0
ClCG11G008190 Citrullus lanatus HOM05D007304 ORTHO05D009233 1.9e-42 176.0 134 55.2
Glyma.20G175900 Glycine max HOM05D007304 ORTHO05D009233 1.9e-42 176.0 134 56.0
Gohir.A02G060400 Gossypium hirsutum HOM05D007304 ORTHO05D009233 1.9e-42 176.0 134 56.0
VMungo0720G1999 Vigna mungo HOM05D007304 ORTHO05D009233 2.5e-42 175.6 134 56.7
BcaC01g04711 Brassica carinata HOM05D007304 ORTHO05D009233 4.2e-42 174.9 134 53.7
C03p34620 Brassica napus HOM05D007304 ORTHO05D009233 4.2e-42 174.9 134 53.7
BolC3t15773H Brassica oleracea HOM05D007304 ORTHO05D009233 4.2e-42 174.9 134 53.7
Ca_10612_v3 Cicer arietinum L. HOM05D007304 ORTHO05D009233 4.2e-42 174.9 134 55.2
Migut.N03345 Erythranthe guttata HOM05D007304 ORTHO05D009233 4.2e-42 174.9 134 53.7
Psat6g187320 Pisum sativum HOM05D007304 ORTHO05D009233 4.2e-42 174.9 134 56.0
Aqoxy5G02599 Aquilegia oxysepala HOM05D007304 ORTHO05D009233 5.6e-42 174.5 134 55.2
A03p28640 Brassica napus HOM05D007304 ORTHO05D009233 5.6e-42 174.5 134 53.7
Carub.0006s2806 Capsella rubella HOM05D007304 ORTHO05D009233 5.6e-42 174.5 134 55.2
Gohir.D02G065833 Gossypium hirsutum HOM05D007304 ORTHO05D009233 5.6e-42 174.5 134 56.7
Thecc.08G182300 Theobroma cacao HOM05D007304 ORTHO05D009233 5.6e-42 174.5 134 54.5
CiPaw.16G062000 Carya illinoinensis HOM05D007304 ORTHO05D009233 7.2e-42 174.1 134 56.0
TWI32G0836 Tripterygium wilfordii HOM05D007304 ORTHO05D009233 7.2e-42 174.1 134 55.2
Cc10_g11390 Coffea canephora HOM05D007304 ORTHO05D009233 9.5e-42 173.7 134 53.7
Duzib177G0769 Durio zibethinus HOM05D007304 ORTHO05D009233 9.5e-42 173.7 134 55.2
Lj4P501T9 Lonicera japonica HOM05D007304 ORTHO05D009233 9.5e-42 173.7 134 55.2
SEGI_32747 Sequoiadendron giganteum HOM05D007304 ORTHO05D009233 9.5e-42 173.7 134 54.5
BraA03t12064Z Brassica rapa HOM05D007304 ORTHO05D009233 1.2e-41 173.3 134 53.7
Manes.02G191500 Manihot esculenta HOM05D007304 ORTHO05D009233 1.2e-41 173.3 134 54.5
EL10Ac8g20249 Beta vulgaris HOM05D007304 ORTHO05D009233 1.6e-41 172.9 134 54.5
Cfa018186 Carpinus fangiana HOM05D007304 ORTHO05D009233 1.6e-41 172.9 134 53.7
Potri.013G113500 Populus trichocarpa HOM05D007304 ORTHO05D009233 2.1e-41 172.6 134 53.7
AL6G43210 Arabidopsis lyrata HOM05D007304 ORTHO05D009233 2.8e-41 172.2 134 53.7
AT4G09620 Arabidopsis thaliana HOM05D007304 ORTHO05D009233 2.8e-41 172.2 134 53.7
Haze_17932 Corylus avellana HOM05D007304 ORTHO05D009233 2.8e-41 172.2 134 53.7
SalBow6G2896 Salvia bowleyana HOM05D007304 ORTHO05D009233 2.8e-41 172.2 134 52.2
Sp6g07990 Schrenkiella parvula HOM05D007304 ORTHO05D009233 2.8e-41 172.2 134 53.0
AUR62004650 Chenopodium quinoa HOM05D007304 ORTHO05D009233 3.6e-41 171.8 134 55.2
DCAR_011537 Daucus carota HOM05D007304 ORTHO05D009233 3.6e-41 171.8 134 52.2
FvH4_5g27630 Fragaria vesca HOM05D007304 ORTHO05D009233 3.6e-41 171.8 133 55.6
FAN04G0833 Fragaria x ananassa HOM05D007304 ORTHO05D009233 3.6e-41 171.8 133 55.6
SGA_v2.0_scaffold149G36602 Striga asiatica HOM05D007304 ORTHO05D009233 3.6e-41 171.8 134 53.0
THA.LOC104816302 Tarenaya hassleriana HOM05D007304 ORTHO05D009233 3.6e-41 171.8 134 53.7
AUR62023569 Chenopodium quinoa HOM05D007304 ORTHO05D009233 4.7e-41 171.4 134 54.5
Thhalv10028979m.g Eutrema salsugineum HOM05D007304 ORTHO05D009233 4.7e-41 171.4 134 53.0
Oeu039601.1 Olea europaea HOM05D007304 ORTHO05D009233 4.7e-41 171.4 134 53.7
RhsimUnG0069500 Rhododendron simsii HOM05D007304 ORTHO05D009233 4.7e-41 171.4 134 54.5
HPP92_003142 Vanilla planifolia HOM05D007304 ORTHO05D009233 4.7e-41 171.4 134 55.2
CAN.G1530.5 Capsicum annuum HOM05D007304 ORTHO05D009233 6.1e-41 171.0 134 55.2
FAN13G2406 Fragaria x ananassa HOM05D007304 ORTHO05D009233 6.1e-41 171.0 133 55.6
Sopen11g009380 Solanum pennellii HOM05D007304 ORTHO05D009233 6.1e-41 171.0 134 55.2
RcHm_v2.0_Chr7g0219041 Rosa chinensis HOM05D007304 ORTHO05D009233 8.0e-41 170.6 133 55.6
Sc26g0000380 Simmondsia chinensis HOM05D007304 ORTHO05D009233 8.0e-41 170.6 134 56.7
Ciclev10002467m.g Citrus clementina HOM05D007304 ORTHO05D009233 1.0e-40 170.2 134 52.2
QL02p033889 Quercus lobata HOM05D007304 ORTHO05D009233 1.0e-40 170.2 134 52.2
Nn5g27732 Nelumbo nucifera HOM05D007304 ORTHO05D009233 1.4e-40 169.9 134 53.7
PGSC0003DMG400009226 Solanum tuberosum HOM05D007304 ORTHO05D009233 1.4e-40 169.9 134 54.5
Atru.chr13.1788 Acer truncatum HOM05D007304 ORTHO05D009233 1.8e-40 169.5 134 50.7
Atru.chr13.1792 Acer truncatum HOM05D007304 ORTHO05D009233 1.8e-40 169.5 134 50.7
PSO063G3154 Papaver somniferum HOM05D007304 ORTHO05D009233 3.0e-40 168.7 134 53.0
Peaxi162Scf00310g00614 Petunia axillaris HOM05D007304 ORTHO05D009233 3.0e-40 168.7 134 53.7
ECA246G3843 Erigeron canadensis HOM05D007304 ORTHO05D009233 4.0e-40 168.3 134 53.0
TAR376G0332 Trochodendron aralioides HOM05D007304 ORTHO05D009233 4.0e-40 168.3 133 55.6
Lsat_1_v5_gn_6_109640 Lactuca sativa HOM05D007304 ORTHO05D009233 5.2e-40 167.9 133 51.9
Rhsim11G0060100 Rhododendron simsii HOM05D007304 ORTHO05D009233 6.8e-40 167.5 134 53.7
CANSAT25G3778 Cannabis sativa HOM05D007304 ORTHO05D009233 8.9e-40 167.2 134 53.0
MD05G1041300 Malus domestica HOM05D007304 ORTHO05D009233 8.9e-40 167.2 134 52.2
PSO017G3329 Papaver somniferum HOM05D007304 ORTHO05D009233 8.9e-40 167.2 134 52.2
CARHR260470 Cardamine hirsuta HOM05D007304 ORTHO05D009233 2.0e-39 166.0 134 51.5
Nitab4.5_0000422g0040 Nicotiana tabacum HOM05D007304 ORTHO05D009233 4.4e-39 164.9 134 53.0
Nitab4.5_0000560g0190 Nicotiana tabacum HOM05D007304 ORTHO05D009233 4.4e-39 164.9 134 53.0
MBI17_g27205_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 2.2e-38 162.5 134 52.2
Sabra13G0096200 Salix brachista HOM05D007304 ORTHO05D009233 9.2e-37 157.1 129 51.2
HanXRQChr05g0150521 Helianthus annuus HOM05D007304 ORTHO05D009233 2.7e-36 155.6 134 49.3
Os03g0838900 Oryza sativa ssp. japonica HOM05D007304 ORTHO05D009233 5.9e-36 154.5 134 50.0
Aa31LG9G14900 Aethionema arabicum HOM05D007304 ORTHO05D009233 1.7e-35 152.9 134 44.8
Pp3c24_12240 Physcomitrium patens HOM05D007304 ORTHO05D009233 6.6e-35 151.0 134 51.5
Mapoly0175s0009 Marchantia polymorpha HOM05D007304 ORTHO05D009233 1.5e-34 149.8 134 47.8
AagrBONN_evm.TU.Sc2ySwM_117.12 Anthoceros agrestis HOM05D007304 ORTHO05D009233 2.5e-34 149.1 133 48.9
Actinidia29417 Actinidia chinensis HOM05D004490 ORTHO05D005353 1.2e-33 146.7 120 53.3
Dinv41708 Davidia involucrata HOM05D007304 ORTHO05D009233 4.4e-31 138.3 122 50.8
Eucgr.F04126 Eucalyptus grandis HOM05D007304 ORTHO05D009233 1.3e-30 136.7 117 50.4
unitig_21.g20192 Utricularia gibba HOM05D007304 ORTHO05D009233 1.0e-27 127.1 133 42.1
CDE02G2755 Ceratophyllum demersum HOM05D000288 ORTHO05D000173 3.1e-24 115.5 78 61.5
Cre10.g445100 Chlamydomonas reinhardtii HOM05D007304 ORTHO05D009233 1.7e-22 109.8 125 38.4
BcaB01g02784 Brassica carinata HOM05D007304 ORTHO05D009233 2.4e-21 105.9 98 45.9
Cpa.g.sc66.48 Carica papaya HOM05D007304 ORTHO05D009233 6.0e-20 101.3 97 46.4
Solyc11g017430.3 Solanum lycopersicum HOM05D007304 ORTHO05D009233 6.8e-16 87.8 48 70.8
MBI11_g39361_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 4.6e-12 75.1 53 56.6
Prupe.8G057100 Prunus persica HOM05D007304 ORTHO05D009233 1.2e-09 67.0 65 43.1
MD10G1047700 Malus domestica HOM05D007304 ORTHO05D009233 5.8e-07 58.2 44 52.3


User provided reference genes

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