Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO200G0091 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 7.4e-278 959.9 485 100.0
SMO089G0008 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 1.3e-250 869.4 534 85.2
SEGI_25528 Sequoiadendron giganteum HOM05D006175 ORTHO05D008081 7.4e-169 597.8 528 56.1
Mapoly0003s0120 Marchantia polymorpha HOM05D006175 ORTHO05D008081 7.9e-163 577.8 530 54.7
GSVIVG01008158001 Vitis vinifera HOM05D006175 ORTHO05D008081 1.5e-158 563.5 532 54.7
AagrBONN_evm.TU.Sc2ySwM_369.495 Anthoceros agrestis HOM05D006175 ORTHO05D008081 3.8e-157 558.9 483 55.9
Zm00001eb037700 Zea mays HOM05D006175 ORTHO05D008081 2.5e-156 556.2 522 53.6
Cpa.g.sc103.12 Carica papaya HOM05D006175 ORTHO05D008081 1.2e-155 553.9 486 56.6
Gohir.D05G004300 Gossypium hirsutum HOM05D006175 ORTHO05D008081 2.7e-155 552.7 533 52.5
Eucgr.H00594 Eucalyptus grandis HOM05D006175 ORTHO05D008081 3.5e-155 552.4 533 52.3
Potri.012G039300 Populus trichocarpa HOM05D006175 ORTHO05D008081 2.3e-154 549.7 533 52.2
Gohir.A05G003900 Gossypium hirsutum HOM05D006175 ORTHO05D008081 3.0e-154 549.3 533 52.3
PSO782G5703 Papaver somniferum HOM05D006175 ORTHO05D008081 5.1e-154 548.5 531 52.5
Gorai.009G004100 Gossypium raimondii HOM05D006175 ORTHO05D008081 8.7e-154 547.7 538 52.2
CiPaw.15G150200 Carya illinoinensis HOM05D006175 ORTHO05D008081 1.1e-153 547.4 518 53.5
Cc04_g09090 Coffea canephora HOM05D006175 ORTHO05D008081 1.5e-153 547.0 532 51.9
PSO063G7422 Papaver somniferum HOM05D006175 ORTHO05D008081 2.5e-153 546.2 531 52.2
Ah.04g156800 Amaranthus hybridus HOM05D006175 ORTHO05D008081 4.3e-153 545.4 476 56.5
PGR083G2599 Punica granatum HOM05D006175 ORTHO05D008081 9.7e-153 544.3 532 50.9
Phvul.004G144700 Phaseolus vulgaris HOM05D006175 ORTHO05D008081 2.4e-151 539.7 532 50.6
Glyma.16G218700 Glycine max HOM05D006175 ORTHO05D008081 3.1e-151 539.3 529 51.6
CANSAT01G2997 Cannabis sativa HOM05D006175 ORTHO05D008081 5.3e-151 538.5 535 52.7
Ciclev10019690m.g Citrus clementina HOM05D006175 ORTHO05D008081 6.9e-151 538.1 535 51.4
Pp3c16_3220 Physcomitrium patens HOM05D006175 ORTHO05D008081 9.0e-151 537.7 533 51.2
Cfa020669 Carpinus fangiana HOM05D006175 ORTHO05D008081 1.5e-150 537.0 535 50.5
MELO3C001937.2 Cucumis melo HOM05D006175 ORTHO05D008081 2.0e-150 536.6 533 51.0
TWI60G0630 Tripterygium wilfordii HOM05D006175 ORTHO05D008081 1.0e-149 534.3 523 52.0
VMungo0464G1920 Vigna mungo HOM05D006175 ORTHO05D008081 1.0e-149 534.3 538 50.0
arahy.Tifrunner.gnm1.ann1.R57YID Arachis hypogaea HOM05D006175 ORTHO05D008081 3.8e-149 532.3 538 51.1
ClCG04G012690 Citrullus lanatus HOM05D006175 ORTHO05D008081 3.8e-149 532.3 537 51.0
Os05g0160800 Oryza sativa ssp. japonica HOM05D006175 ORTHO05D008081 1.1e-148 530.8 490 53.5
EL10Ac3g05085 Beta vulgaris HOM05D006175 ORTHO05D008081 1.4e-148 530.4 514 52.9
Thecc.03G068300 Theobroma cacao HOM05D006175 ORTHO05D008081 2.5e-148 529.6 529 50.9
CsaV3_1G032270 Cucumis sativus L. HOM05D006175 ORTHO05D008081 3.2e-148 529.3 533 51.6
Atru.chr3.1303 Acer truncatum HOM05D006175 ORTHO05D008081 5.5e-148 528.5 535 50.5
Oeu019145.1 Olea europaea HOM05D006175 ORTHO05D008081 5.5e-148 528.5 534 50.7
Duzib168G0906 Durio zibethinus HOM05D006175 ORTHO05D008081 7.2e-148 528.1 562 48.8
arahy.Tifrunner.gnm1.ann1.SV5NHS Arachis hypogaea HOM05D006175 ORTHO05D008081 9.3e-148 527.7 547 50.5
QL10p033089 Quercus lobata HOM05D006175 ORTHO05D008081 2.7e-147 526.2 567 48.5
Sc10g0008900 Simmondsia chinensis HOM05D006175 ORTHO05D008081 2.7e-147 526.2 544 49.8
Dinv02367 Davidia involucrata HOM05D006175 ORTHO05D008081 3.6e-147 525.8 498 54.2
Sed0010232 Sechium edule HOM05D006175 ORTHO05D008081 3.6e-147 525.8 539 50.5
Migut.O00238 Erythranthe guttata HOM05D006175 ORTHO05D008081 6.1e-147 525.0 537 50.7
Sopen03g028960 Solanum pennellii HOM05D006175 ORTHO05D008081 6.1e-147 525.0 530 50.9
DCAR_023267 Daucus carota HOM05D006175 ORTHO05D008081 7.9e-147 524.6 575 47.8
FvH4_5g17980 Fragaria vesca HOM05D006175 ORTHO05D008081 1.3e-146 523.9 527 50.9
PGSC0003DMG400031043 Solanum tuberosum HOM05D006175 ORTHO05D008081 1.3e-146 523.9 535 50.5
Solyc03g098250.4 Solanum lycopersicum HOM05D006175 ORTHO05D008081 3.0e-146 522.7 535 50.5
CAN.G637.8 Capsicum annuum HOM05D006175 ORTHO05D008081 1.1e-145 520.8 532 51.1
Aa31LG1G13320 Aethionema arabicum HOM05D006175 ORTHO05D008081 9.7e-145 517.7 527 49.0
Aqoxy2G03817 Aquilegia oxysepala HOM05D006175 ORTHO05D008081 9.7e-145 517.7 533 49.5
TAR622G0246 Trochodendron aralioides HOM05D006175 ORTHO05D008081 9.7e-145 517.7 504 52.0
AT5G22110 Arabidopsis thaliana HOM05D006175 ORTHO05D008081 3.7e-144 515.8 535 49.3
RcHm_v2.0_Chr7g0177621 Rosa chinensis HOM05D006175 ORTHO05D008081 3.7e-144 515.8 544 49.6
Sabra12G0027800 Salix brachista HOM05D006175 ORTHO05D008081 3.7e-144 515.8 532 50.4
Lj2g0014656 Lotus japonicus HOM05D006175 ORTHO05D008081 4.8e-144 515.4 540 49.6
Prupe.8G055400 Prunus persica HOM05D006175 ORTHO05D008081 5.3e-143 511.9 528 50.9
SHI32102 Sapria himalayana HOM05D006175 ORTHO05D008081 5.3e-143 511.9 567 47.3
THA.LOC104810934 Tarenaya hassleriana HOM05D006175 ORTHO05D008081 1.2e-142 510.8 534 49.3
AL6G33090 Arabidopsis lyrata HOM05D006175 ORTHO05D008081 2.2e-141 506.5 535 48.8
Lsat_1_v5_gn_2_15241 Lactuca sativa HOM05D006175 ORTHO05D008081 2.2e-141 506.5 512 51.0
ATR0598G269 Amborella trichopoda HOM05D006175 ORTHO05D008081 2.9e-141 506.1 499 53.5
Thhalv10001961m.g Eutrema salsugineum HOM05D006175 ORTHO05D008081 2.9e-141 506.1 529 47.8
Carub.0006s1975 Capsella rubella HOM05D006175 ORTHO05D008081 3.8e-141 505.8 539 48.4
COL.COLO4_27108 Corchorus olitorius HOM05D006175 ORTHO05D008081 1.1e-140 504.2 474 52.7
SpUn0288_0010 Schrenkiella parvula HOM05D006175 ORTHO05D008081 2.5e-140 503.1 529 47.8
SGA_v2.0_scaffold90G27775 Striga asiatica HOM05D006175 ORTHO05D008081 1.2e-139 500.7 530 49.2
Peaxi162Scf00171g00431 Petunia axillaris HOM05D006175 ORTHO05D008081 2.1e-139 500.0 535 50.1
SalBow5G1258 Salvia bowleyana HOM05D006175 ORTHO05D008081 7.9e-139 498.0 543 47.9
BcaB01g03058 Brassica carinata HOM05D006175 ORTHO05D008081 1.1e-137 494.2 522 48.3
ECA238G0751 Erigeron canadensis HOM05D006175 ORTHO05D008081 2.0e-137 493.4 530 48.1
BcaC01g04929 Brassica carinata HOM05D006175 ORTHO05D008081 2.8e-136 489.6 529 48.0
C03p31990 Brassica napus HOM05D006175 ORTHO05D008081 3.7e-136 489.2 529 48.0
BolC3t15542H Brassica oleracea HOM05D006175 ORTHO05D008081 3.7e-136 489.2 529 48.0
A03p26700 Brassica napus HOM05D006175 ORTHO05D008081 1.4e-135 487.3 530 48.1
BraA03t11882Z Brassica rapa HOM05D006175 ORTHO05D008081 2.0e-134 483.4 530 48.1
MD06G1235400 Malus domestica HOM05D006175 ORTHO05D008081 6.5e-133 478.4 519 48.2
Haze_18963 Corylus avellana HOM05D006175 ORTHO05D008081 4.2e-132 475.7 428 54.9
AUR62028170 Chenopodium quinoa HOM05D006175 ORTHO05D008081 5.5e-132 475.3 475 52.2
Medtr6g075170 Medicago truncatula HOM05D006175 ORTHO05D008081 1.2e-131 474.2 536 47.4
vmacro03513 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 1.2e-131 474.2 600 43.8
AUR62002056 Chenopodium quinoa HOM05D006175 ORTHO05D008081 2.3e-130 469.9 579 45.6
TPR.G28014 Trifolium pratense HOM05D006175 ORTHO05D008081 4.8e-128 462.2 548 44.2
Manes.03G098800 Manihot esculenta HOM05D006175 ORTHO05D008081 8.2e-128 461.5 489 48.5
Lj5A165T85 Lonicera japonica HOM05D006175 ORTHO05D008081 2.6e-126 456.4 475 48.8
CSS0011699 Camellia sinensis var. sinensis HOM05D006175 ORTHO05D008081 4.7e-123 445.7 550 43.8
HPP92_019162 Vanilla planifolia HOM05D006175 ORTHO05D008081 3.0e-122 443.0 480 50.2
Hund09784 Selenicereus undatus HOM05D006175 ORTHO05D008081 2.0e-118 430.3 516 46.3
Nitab4.5_0005973g0040 Nicotiana tabacum HOM05D006175 ORTHO05D008081 2.7e-118 429.9 555 44.7
Lalb_Chr22g0353691 Lupinus albus HOM05D006175 ORTHO05D008081 1.1e-116 424.5 297 63.6
Rhsim06G0000100 Rhododendron simsii HOM05D006175 ORTHO05D008081 1.2e-110 404.4 297 62.3
HanXRQChr05g0129731 Helianthus annuus HOM05D006175 ORTHO05D008081 3.8e-109 399.4 316 58.2
HanXRQChr11g0338981 Helianthus annuus HOM05D006175 ORTHO05D008081 6.6e-101 372.1 301 58.1
vmacro01251 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 2.3e-98 363.6 627 36.5
Nitab4.5_0001180g0190 Nicotiana tabacum HOM05D006175 ORTHO05D008081 1.5e-97 360.9 544 40.6
Prupe.5G240100 Prunus persica HOM05D006175 ORTHO05D008081 3.3e-92 343.2 548 38.1
unitig_0.g1094 Utricularia gibba HOM05D006175 ORTHO05D008081 4.3e-92 342.8 520 40.0
FAN18G1603 Fragaria x ananassa HOM05D006175 ORTHO05D008081 6.2e-91 339.0 232 66.8
MCO14G014 Micromonas commoda HOM05D006175 ORTHO05D008081 1.5e-81 307.8 651 31.6
Psat6g072600 Pisum sativum HOM05D006175 ORTHO05D008081 7.5e-81 305.4 519 38.3
Glyma.09G169100 Glycine max HOM05D006175 ORTHO05D008081 2.9e-80 303.5 300 50.7
MD14G1242400 Malus domestica HOM05D006175 ORTHO05D008081 2.6e-73 280.4 434 38.7
Cre10.g424200 Chlamydomonas reinhardtii HOM05D006175 ORTHO05D008081 1.1e-63 248.4 507 32.5
AL4G26880 Arabidopsis lyrata HOM05D006175 ORTHO05D008081 7.1e-63 245.7 317 44.2
PRCOL_00003367 Prasinoderma coloniale HOM05D006175 ORTHO05D008081 1.5e-60 238.0 561 31.4
VMungo1215G0683 Vigna mungo HOM05D006175 ORTHO05D008081 1.3e-48 198.4 197 48.2
AUR62043421 Chenopodium quinoa HOM05D006175 ORTHO05D008081 1.4e-47 194.9 169 56.8
CDE04G1443 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 1.5e-41 174.9 104 75.0
CDE04G3312 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 1.3e-27 128.6 150 44.0
Lalb_Chr22g0353701 Lupinus albus HOM05D006175 ORTHO05D008081 6.9e-26 122.9 174 43.1
CDE04G2185 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 5.9e-25 119.8 85 62.4
Cfa025039 Carpinus fangiana HOM05D006175 ORTHO05D008081 5.0e-24 116.7 559 24.2
FAN04G2119 Fragaria x ananassa HOM05D006175 ORTHO05D008081 2.3e-21 107.8 167 39.5
HanXRQChr05g0129721 Helianthus annuus HOM05D006175 ORTHO05D008081 6.7e-21 106.3 170 39.4
FAN08G2730 Fragaria x ananassa HOM05D006175 ORTHO05D008081 8.8e-21 105.9 167 38.3
FAN13G0892 Fragaria x ananassa HOM05D006175 ORTHO05D008081 3.3e-20 104.0 167 38.3
HanXRQChr11g0338971 Helianthus annuus HOM05D006175 ORTHO05D008081 1.7e-19 101.7 170 38.8
Ca_23674_v3 Cicer arietinum L. HOM05D006175 ORTHO05D008081 5.9e-17 93.2 173 32.9
Thecc.10G092900 Theobroma cacao HOM05D006175 ORTHO05D008952 2.1e-14 84.7 141 36.2
Thecc.04G242900 Theobroma cacao HOM05D006175 ORTHO05D008081 2.4e-10 71.2 48 68.8
BcaC05g28616 Brassica carinata HOM05D002760 ORTHO05D001361 3.8e-08 63.9 31 77.4
A07p06810 Brassica napus HOM05D002760 ORTHO05D003169 3.8e-08 63.9 31 77.4
BNapus_Darmor_BZH_scaffold_38p01460 Brassica napus HOM05D002760 ORTHO05D003169 3.8e-08 63.9 31 77.4
BraA03t12607Z Brassica rapa HOM05D002760 ORTHO05D003169 3.8e-08 63.9 31 77.4
C05p47240 Brassica napus HOM05D002760 ORTHO05D003169 1.1e-07 62.4 31 74.2


User provided reference genes

Program Settings