Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO200G0046 Selaginella moellendorffii HOM05D005966 ORTHO05D007584 0.0e+00 1377.1 698 100.0
Mapoly0010s0026 Marchantia polymorpha HOM05D005966 ORTHO05D007584 2.8e-113 413.7 706 37.8
SEGI_37567 Sequoiadendron giganteum HOM05D005966 ORTHO05D007584 1.5e-106 391.3 698 36.8
Pp3c3_25450 Physcomitrium patens HOM05D005966 ORTHO05D007584 6.8e-99 365.9 637 38.3
CiPaw.04G170200 Carya illinoinensis HOM05D005966 ORTHO05D007584 7.8e-87 325.9 642 32.7
Cfa003353 Carpinus fangiana HOM05D005966 ORTHO05D007584 6.6e-86 322.8 647 31.7
ATR1156G034 Amborella trichopoda HOM05D005966 ORTHO05D007584 2.5e-85 320.9 658 32.8
CANSAT11G2564 Cannabis sativa HOM05D005966 ORTHO05D007584 2.5e-85 320.9 650 31.1
TAR636G0633 Trochodendron aralioides HOM05D005966 ORTHO05D007584 1.4e-83 315.1 610 32.6
MD15G1175600 Malus domestica HOM05D005966 ORTHO05D007584 1.2e-82 312.0 646 31.0
Haze_25609 Corylus avellana HOM05D005966 ORTHO05D007584 2.0e-82 311.2 660 31.4
Prupe.7G240500 Prunus persica HOM05D005966 ORTHO05D007584 1.1e-80 305.4 645 31.5
Eucgr.C04186 Eucalyptus grandis HOM05D005966 ORTHO05D007584 3.2e-80 303.9 643 30.6
Nn2g12002 Nelumbo nucifera HOM05D005966 ORTHO05D007584 4.1e-80 303.5 653 31.7
Ah.14g080180 Amaranthus hybridus HOM05D005966 ORTHO05D007584 2.7e-79 300.8 598 32.6
Hund26492 Selenicereus undatus HOM05D005966 ORTHO05D007584 3.5e-79 300.4 645 31.8
Hma1.2p1_0018F.1_g012590 Hydrangea macrophylla HOM05D005966 ORTHO05D007584 4.6e-79 300.1 655 31.3
SGA_v2.0_scaffold163G38051 Striga asiatica HOM05D005966 ORTHO05D007584 7.8e-79 299.3 652 32.2
Actinidia07431 Actinidia chinensis HOM05D005966 ORTHO05D007584 1.0e-78 298.9 646 31.3
HPP92_009844 Vanilla planifolia HOM05D005966 ORTHO05D007584 1.0e-78 298.9 661 30.9
Potri.015G057100 Populus trichocarpa HOM05D005966 ORTHO05D007584 1.3e-78 298.5 657 30.1
Dinv36541 Davidia involucrata HOM05D005966 ORTHO05D007584 2.3e-78 297.7 653 29.9
Os12g0638600 Oryza sativa ssp. japonica HOM05D005966 ORTHO05D007584 3.0e-78 297.4 653 32.3
ClCG08G000940 Citrullus lanatus HOM05D005966 ORTHO05D007584 5.0e-78 296.6 659 31.1
GSVIVG01015509001 Vitis vinifera HOM05D005966 ORTHO05D007584 8.6e-78 295.8 655 30.8
Atru.chr7.1212 Acer truncatum HOM05D005966 ORTHO05D007584 1.1e-77 295.4 660 30.2
C03p11480 Brassica napus HOM05D005966 ORTHO05D007584 1.1e-77 295.4 642 31.3
Aqoxy5G00491 Aquilegia oxysepala HOM05D005966 ORTHO05D007584 1.5e-77 295.0 648 31.2
Gorai.001G041100 Gossypium raimondii HOM05D005966 ORTHO05D007584 1.5e-77 295.0 657 31.1
PSO455G0207 Papaver somniferum HOM05D005966 ORTHO05D007584 1.5e-77 295.0 649 31.1
CsaV3_5G040100 Cucumis sativus L. HOM05D005966 ORTHO05D007584 4.3e-77 293.5 652 30.7
Gohir.A07G035000 Gossypium hirsutum HOM05D005966 ORTHO05D007584 4.3e-77 293.5 658 30.7
A03p09900 Brassica napus HOM05D005966 ORTHO05D007584 7.3e-77 292.7 639 31.1
AL6G31730 Arabidopsis lyrata HOM05D005966 ORTHO05D007584 9.5e-77 292.4 645 31.0
AUR62011094 Chenopodium quinoa HOM05D005966 ORTHO05D007584 9.5e-77 292.4 644 30.9
BolC3t13620H Brassica oleracea HOM05D005966 ORTHO05D007584 2.1e-76 291.2 643 31.6
PSO170G3915 Papaver somniferum HOM05D005966 ORTHO05D007584 2.1e-76 291.2 650 30.5
Duzib187G1826 Durio zibethinus HOM05D005966 ORTHO05D007584 2.8e-76 290.8 657 30.0
Lj4g0014642 Lotus japonicus HOM05D005966 ORTHO05D007584 2.8e-76 290.8 649 29.7
Aa31LG1G14440 Aethionema arabicum HOM05D005966 ORTHO05D007584 3.6e-76 290.4 650 31.1
EL10Ac8g18623 Beta vulgaris HOM05D005966 ORTHO05D007584 3.6e-76 290.4 644 30.6
Sopen12g002600 Solanum pennellii HOM05D005966 ORTHO05D007584 4.7e-76 290.0 659 30.7
vmacro06121 Vaccinium macrocarpon HOM05D005966 ORTHO05D007584 4.7e-76 290.0 674 29.8
vmacro06181 Vaccinium macrocarpon HOM05D005966 ORTHO05D007584 4.7e-76 290.0 674 29.8
TPR.G10691 Trifolium pratense HOM05D005966 ORTHO05D007584 6.2e-76 289.7 654 31.5
Solyc12g006650.2 Solanum lycopersicum HOM05D005966 ORTHO05D007584 8.1e-76 289.3 659 30.7
ECA236G0249 Erigeron canadensis HOM05D005966 ORTHO05D007584 1.1e-75 288.9 634 30.4
AUR62033484 Chenopodium quinoa HOM05D005966 ORTHO05D007584 1.4e-75 288.5 643 30.5
MELO3C022187.2 Cucumis melo HOM05D005966 ORTHO05D007584 1.4e-75 288.5 652 30.4
PGSC0003DMG400020667 Solanum tuberosum HOM05D005966 ORTHO05D007584 1.8e-75 288.1 659 30.0
Ciclev10007689m.g Citrus clementina HOM05D005966 ORTHO05D007584 2.3e-75 287.7 656 31.1
Psat4g039400 Pisum sativum HOM05D005966 ORTHO05D007584 5.2e-75 286.6 656 30.8
CARHR192650 Cardamine hirsuta HOM05D005966 ORTHO05D007584 6.8e-75 286.2 649 30.4
DCAR_014873 Daucus carota HOM05D005966 ORTHO05D007584 6.8e-75 286.2 648 31.0
Oeu018459.1 Olea europaea HOM05D005966 ORTHO05D007584 6.8e-75 286.2 678 30.5
VMungo1215G0752 Vigna mungo HOM05D005966 ORTHO05D007584 6.8e-75 286.2 657 30.0
RcHm_v2.0_Chr7g0212931 Rosa chinensis HOM05D005966 ORTHO05D007584 8.9e-75 285.8 649 29.1
Nitab4.5_0007523g0010 Nicotiana tabacum HOM05D005966 ORTHO05D007584 1.2e-74 285.4 664 30.1
Nitab4.5_0010819g0010 Nicotiana tabacum HOM05D005966 ORTHO05D007584 1.2e-74 285.4 667 30.3
Sabra15G0082400 Salix brachista HOM05D005966 ORTHO05D007584 1.5e-74 285.0 651 29.6
Thhalv10012923m.g Eutrema salsugineum HOM05D005966 ORTHO05D007584 2.0e-74 284.6 643 31.3
Phvul.003G161800 Phaseolus vulgaris HOM05D005966 ORTHO05D007584 2.0e-74 284.6 666 30.0
CAN.G377.10 Capsicum annuum HOM05D005966 ORTHO05D007584 2.6e-74 284.3 658 29.9
PGR102G3358 Punica granatum HOM05D005966 ORTHO05D007584 2.6e-74 284.3 644 30.6
AT5G20170 Arabidopsis thaliana HOM05D005966 ORTHO05D007584 3.4e-74 283.9 649 30.4
Oeu021589.1 Olea europaea HOM05D005966 ORTHO05D007584 3.4e-74 283.9 617 30.1
Sp6g24230 Schrenkiella parvula HOM05D005966 ORTHO05D007584 3.4e-74 283.9 643 30.6
HanXRQChr04g0104201 Helianthus annuus HOM05D005966 ORTHO05D007584 5.8e-74 283.1 625 32.0
FAN18G1628 Fragaria x ananassa HOM05D005966 ORTHO05D007584 9.8e-74 282.3 646 29.1
Lalb_Chr07g0178861 Lupinus albus HOM05D005966 ORTHO05D007584 9.8e-74 282.3 654 29.2
MSTRG.14036 Avicennia marina HOM05D005966 ORTHO05D007584 1.3e-73 282.0 654 31.0
BraA03t10303Z Brassica rapa HOM05D005966 ORTHO05D007584 1.3e-73 282.0 639 30.7
Medtr4g114100 Medicago truncatula HOM05D005966 ORTHO05D007584 1.7e-73 281.6 655 30.5
Gorai.009G019100 Gossypium raimondii HOM05D005966 ORTHO05D007584 2.2e-73 281.2 665 29.5
FvH4_5g23630 Fragaria vesca HOM05D005966 ORTHO05D007584 3.7e-73 280.4 646 29.1
Glyma.05G009700 Glycine max HOM05D005966 ORTHO05D007584 4.9e-73 280.0 653 29.6
Cc06_g08730 Coffea canephora HOM05D005966 ORTHO05D007584 6.4e-73 279.6 650 29.2
Ca_21691_v3 Cicer arietinum L. HOM05D005966 ORTHO05D007584 8.3e-73 279.3 663 29.7
Glyma.17G117600 Glycine max HOM05D005966 ORTHO05D007584 8.3e-73 279.3 648 29.6
Gohir.A05G017800 Gossypium hirsutum HOM05D005966 ORTHO05D007584 1.1e-72 278.9 662 29.8
Carub.0006s1857 Capsella rubella HOM05D005966 ORTHO05D007584 2.4e-72 277.7 649 30.2
Thecc.09G123800 Theobroma cacao HOM05D005966 ORTHO05D007584 2.4e-72 277.7 656 28.7
Actinidia26399 Actinidia chinensis HOM05D005966 ORTHO05D007584 3.2e-72 277.3 660 30.2
FAN13G2896 Fragaria x ananassa HOM05D005966 ORTHO05D007584 3.2e-72 277.3 646 28.9
Sed0002176 Sechium edule HOM05D005966 ORTHO05D007584 5.4e-72 276.6 650 28.8
FAN18G2691 Fragaria x ananassa HOM05D005966 ORTHO05D007584 2.1e-71 274.6 603 29.4
arahy.Tifrunner.gnm1.ann1.QB31BF Arachis hypogaea HOM05D005966 ORTHO05D007584 4.6e-71 273.5 654 28.9
Zm00001eb207940 Zea mays HOM05D005966 ORTHO05D007584 1.7e-70 271.6 650 29.4
THA.LOC104799647 Tarenaya hassleriana HOM05D005966 ORTHO05D007584 2.3e-70 271.2 652 31.0
CSS0033485 Camellia sinensis var. sinensis HOM05D005966 ORTHO05D007584 6.6e-70 269.6 665 29.2
Lsat_1_v5_gn_8_59020 Lactuca sativa HOM05D005966 ORTHO05D007584 1.5e-69 268.5 649 30.4
Migut.E01544 Erythranthe guttata HOM05D005966 ORTHO05D007584 9.5e-69 265.8 651 30.6
arahy.Tifrunner.gnm1.ann1.Z0FLIL Arachis hypogaea HOM05D005966 ORTHO05D007584 1.6e-68 265.0 667 28.8
Peaxi162Scf00984g00027 Petunia axillaris HOM05D005966 ORTHO05D007584 2.8e-68 264.2 633 30.6
SalBow1G1471 Salvia bowleyana HOM05D005966 ORTHO05D007584 6.2e-68 263.1 732 27.7
Rhsim03G0247300 Rhododendron simsii HOM05D005966 ORTHO05D007584 8.4e-65 252.7 586 30.2
Lj7C631G5 Lonicera japonica HOM05D005966 ORTHO05D007584 1.4e-64 251.9 746 26.1
Gohir.D07G039000 Gossypium hirsutum HOM05D005966 ORTHO05D007584 7.8e-63 246.1 654 28.7
AagrBONN_evm.TU.Sc2ySwM_117.630 Anthoceros agrestis HOM05D005966 ORTHO05D007584 4.4e-58 230.3 321 41.7
Sabra15G0082900 Salix brachista HOM05D005966 ORTHO05D007584 4.4e-58 230.3 631 28.2
Manes.06G049700 Manihot esculenta HOM05D005966 ORTHO05D007584 9.9e-58 229.2 657 26.9
Gohir.D05G018700 Gossypium hirsutum HOM05D005966 ORTHO05D007584 2.9e-57 227.6 665 27.1
QL02p087915 Quercus lobata HOM05D005966 ORTHO05D007584 8.4e-57 226.1 903 22.8
CDE01G0041 Ceratophyllum demersum HOM05D005966 ORTHO05D007584 4.9e-49 200.3 565 27.6
Zm00001eb334260 Zea mays HOM05D005966 ORTHO05D007584 1.3e-46 192.2 546 27.1
unitig_578.g16582 Utricularia gibba HOM05D005966 ORTHO05D007584 9.6e-45 186.0 635 27.1
MD02G1034800 Malus domestica HOM05D005966 ORTHO05D007584 6.9e-43 179.9 663 25.2
Sc08g0006730 Simmondsia chinensis HOM05D005966 ORTHO05D007584 1.3e-41 175.6 516 26.2
Glyma.14G007400 Glycine max HOM05D005966 ORTHO05D007584 2.9e-41 174.5 293 36.5
Cpa.g.sc75.51 Carica papaya HOM05D005966 ORTHO05D007584 1.5e-37 162.2 500 27.2
FAN08G0676 Fragaria x ananassa HOM05D005966 ORTHO05D007584 6.3e-28 130.2 159 40.3
CBR_g48370 Chara braunii HOM05D005966 ORTHO05D000048 6.9e-27 126.7 261 33.3
COL.COLO4_05778 Corchorus olitorius HOM05D005966 ORTHO05D007584 1.2e-26 125.9 250 34.0
SHI18656 Sapria himalayana HOM05D005966 ORTHO05D007584 9.3e-24 116.3 515 23.5
Sc08g0006740 Simmondsia chinensis HOM05D005966 ORTHO05D007584 3.0e-22 111.3 140 40.7
SHI18657 Sapria himalayana HOM05D005966 ORTHO05D007584 4.5e-18 97.4 132 38.6
Aqoxy7G02129 Aquilegia oxysepala HOM05D005966 ORTHO05D007584 3.1e-11 74.7 159 32.1
Pp3c19_8370 Physcomitrium patens HOM05D005966 ORTHO05D007584 1.4e-08 65.9 134 36.6
Cpa.g.sc75.52 Carica papaya HOM05D005966 ORTHO05D007584 4.7e-07 60.8 92 33.7
Lsat_1_v5_gn_8_82580 Lactuca sativa HOM05D005966 ORTHO05D007584 3.0e-06 58.2 50 48.0
Dinv41526 Davidia involucrata HOM05D006513 ORTHO05D008150 3.9e-06 57.8 148 27.0


User provided reference genes

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