Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO176G0004 Selaginella moellendorffii HOM05D006967 ORTHO05D008692 1.1e-178 629.8 316 100.0
Potri.003G157800 Populus trichocarpa HOM05D006967 ORTHO05D008692 3.3e-37 159.8 379 31.1
SEGI_11534 Sequoiadendron giganteum HOM05D006967 ORTHO05D008692 1.7e-36 157.5 409 29.8
MBI10_g30431_MAGBIO Magnolia biondii HOM05D006967 ORTHO05D008692 1.5e-34 151.0 391 29.7
RcHm_v2.0_Chr5g0022471 Rosa chinensis HOM05D006967 ORTHO05D008692 3.8e-33 146.4 370 29.7
Manes.18G124500 Manihot esculenta HOM05D006967 ORTHO05D008692 1.1e-32 144.8 381 29.7
Oeu008739.3 Olea europaea HOM05D006967 ORTHO05D008692 3.2e-32 143.3 399 29.3
Carub.0007s2087 Capsella rubella HOM05D006967 ORTHO05D008692 4.2e-32 142.9 371 30.2
CSS0034338 Camellia sinensis var. sinensis HOM05D006967 ORTHO05D008692 9.4e-32 141.7 377 31.3
Nn7g38428 Nelumbo nucifera HOM05D006967 ORTHO05D008692 9.4e-32 141.7 391 29.2
Prupe.4G123400 Prunus persica HOM05D006967 ORTHO05D008692 2.7e-31 140.2 390 28.7
FAN11G3906 Fragaria x ananassa HOM05D006967 ORTHO05D008692 6.1e-31 139.0 373 29.2
FAN21G4071 Fragaria x ananassa HOM05D006967 ORTHO05D008692 8.0e-31 138.7 395 28.1
Aqoxy1G01340 Aquilegia oxysepala HOM05D006967 ORTHO05D008692 1.0e-30 138.3 380 29.5
Thhalv10024898m.g Eutrema salsugineum HOM05D006967 ORTHO05D008692 1.0e-30 138.3 375 30.7
MD10G1221200 Malus domestica HOM05D006967 ORTHO05D008692 1.8e-30 137.5 396 28.8
CiPaw.09G141400 Carya illinoinensis HOM05D006967 ORTHO05D008692 2.3e-30 137.1 390 27.9
PSO675G8399 Papaver somniferum HOM05D006967 ORTHO05D008692 3.0e-30 136.7 390 30.8
BraA01t01143Z Brassica rapa HOM05D006967 ORTHO05D008692 4.0e-30 136.3 366 30.1
BcaC09g51322 Brassica carinata HOM05D006967 ORTHO05D008692 8.8e-30 135.2 377 29.4
C01p14260 Brassica napus HOM05D006967 ORTHO05D008692 8.8e-30 135.2 377 29.4
FvH4_3g13520 Fragaria vesca HOM05D006967 ORTHO05D008692 8.8e-30 135.2 373 28.7
PSO541G0117 Papaver somniferum HOM05D006967 ORTHO05D008692 1.5e-29 134.4 387 29.7
MSTRG.24877 Avicennia marina HOM05D006967 ORTHO05D008692 2.0e-29 134.0 375 30.1
BcaNung03720 Brassica carinata HOM05D006967 ORTHO05D008692 2.0e-29 134.0 380 28.4
BolC1t01391H Brassica oleracea HOM05D006967 ORTHO05D008692 2.0e-29 134.0 377 29.7
Sp7g18650 Schrenkiella parvula HOM05D006967 ORTHO05D008692 2.0e-29 134.0 378 29.1
THA.LOC104806234 Tarenaya hassleriana HOM05D006967 ORTHO05D008692 2.0e-29 134.0 393 29.0
CsaV3_5G000140 Cucumis sativus L. HOM05D006967 ORTHO05D008692 2.6e-29 133.7 381 28.6
Sed0023777 Sechium edule HOM05D006967 ORTHO05D008692 3.3e-29 133.3 382 28.0
Thecc.05G313500 Theobroma cacao HOM05D006967 ORTHO05D008692 3.3e-29 133.3 384 29.9
AL7G33600 Arabidopsis lyrata HOM05D006967 ORTHO05D008692 5.7e-29 132.5 382 28.5
CANSAT35G1213 Cannabis sativa HOM05D006967 ORTHO05D008692 5.7e-29 132.5 378 28.0
TPR.G19829 Trifolium pratense HOM05D006967 ORTHO05D008692 5.7e-29 132.5 388 27.1
Haze_05177 Corylus avellana HOM05D006967 ORTHO05D008692 9.7e-29 131.7 389 26.0
TWI63G0275 Tripterygium wilfordii HOM05D006967 ORTHO05D008692 1.3e-28 131.3 378 28.3
A01p12010 Brassica napus HOM05D006967 ORTHO05D008692 1.7e-28 131.0 366 28.7
AagrBONN_evm.TU.Sc2ySwM_368.2736 Anthoceros agrestis HOM05D006967 ORTHO05D008692 2.2e-28 130.6 385 28.3
MELO3C005917.2 Cucumis melo HOM05D006967 ORTHO05D008692 3.7e-28 129.8 381 28.1
CAN.G40.7 Capsicum annuum HOM05D006967 ORTHO05D008692 8.2e-28 128.6 387 29.2
Cc09_g04480 Coffea canephora HOM05D006967 ORTHO05D008692 1.8e-27 127.5 391 29.4
AT4G20310 Arabidopsis thaliana HOM05D006967 ORTHO05D008692 2.4e-27 127.1 366 28.4
DCAR_004368 Daucus carota HOM05D006967 ORTHO05D008692 2.4e-27 127.1 374 28.9
Peaxi162Scf00715g00310 Petunia axillaris HOM05D006967 ORTHO05D008692 2.4e-27 127.1 378 28.3
Medtr8g070630 Medicago truncatula HOM05D006967 ORTHO05D008692 4.1e-27 126.3 387 26.9
CARHR227130 Cardamine hirsuta HOM05D006967 ORTHO05D008692 5.3e-27 125.9 361 28.8
Sopen01g015960 Solanum pennellii HOM05D006967 ORTHO05D008692 5.3e-27 125.9 387 27.6
BcaNung03721 Brassica carinata HOM05D006967 ORTHO05D008692 7.0e-27 125.6 380 28.4
Eucgr.E04333 Eucalyptus grandis HOM05D006967 ORTHO05D008692 7.0e-27 125.6 379 28.0
AUR62032339 Chenopodium quinoa HOM05D006967 ORTHO05D008692 9.1e-27 125.2 374 28.1
Sopen01g019010 Solanum pennellii HOM05D006967 ORTHO05D008692 1.6e-26 124.4 376 27.7
ECA238G0649 Erigeron canadensis HOM05D006967 ORTHO05D008692 2.0e-26 124.0 361 29.4
Lj4g0002657 Lotus japonicus HOM05D006967 ORTHO05D008692 2.6e-26 123.6 386 26.4
Aa31LG6G2720 Aethionema arabicum HOM05D006967 ORTHO05D008692 5.9e-26 122.5 382 28.5
ATR0737G179 Amborella trichopoda HOM05D006967 ORTHO05D008692 1.0e-25 121.7 379 28.8
Solyc01g020520.4 Solanum lycopersicum HOM05D006967 ORTHO05D008692 1.3e-25 121.3 376 27.9
Rhsim13G0136900 Rhododendron simsii HOM05D006967 ORTHO05D008692 2.2e-25 120.6 342 28.9
HanXRQChr14g0439851 Helianthus annuus HOM05D006967 ORTHO05D008692 6.5e-25 119.0 386 26.4
HPP92_009939 Vanilla planifolia HOM05D006967 ORTHO05D008692 6.5e-25 119.0 388 27.6
Duzib177G0925 Durio zibethinus HOM05D006967 ORTHO05D008692 2.5e-24 117.1 377 29.2
FAN16G1037 Fragaria x ananassa HOM05D006967 ORTHO05D008692 4.2e-24 116.3 335 28.1
SHI28117 Sapria himalayana HOM05D006967 ORTHO05D008692 7.2e-24 115.5 398 26.6
AUR62028614 Chenopodium quinoa HOM05D006967 ORTHO05D008692 9.4e-24 115.2 335 27.8
Gohir.A13G109700 Gossypium hirsutum HOM05D006967 ORTHO05D008692 9.4e-24 115.2 384 26.6
Gohir.D13G112300 Gossypium hirsutum HOM05D006967 ORTHO05D008692 9.4e-24 115.2 383 27.2
Gorai.013G126100 Gossypium raimondii HOM05D006967 ORTHO05D008692 9.4e-24 115.2 383 27.4
Nitab4.5_0000217g0010 Nicotiana tabacum HOM05D006967 ORTHO05D008692 2.1e-23 114.0 344 29.4
ClCG01G000040 Citrullus lanatus HOM05D006967 ORTHO05D008692 4.7e-23 112.8 340 27.6
Solyc01g049910.4 Solanum lycopersicum HOM05D006967 ORTHO05D008692 4.7e-23 112.8 384 26.8
vmacro03578 Vaccinium macrocarpon HOM05D006967 ORTHO05D008692 1.4e-22 111.3 338 29.0
Sabra03G0114400 Salix brachista HOM05D006967 ORTHO05D008692 3.0e-22 110.2 331 28.7
Lj2A340G21 Lonicera japonica HOM05D006967 ORTHO05D008692 6.8e-22 109.0 340 27.6
Os01g0654200 Oryza sativa ssp. japonica HOM05D006967 ORTHO05D008692 8.8e-22 108.6 312 27.9
SGA_v2.0_scaffold62G21391 Striga asiatica HOM05D006967 ORTHO05D008692 2.6e-21 107.1 365 24.7
EL10Ac5g10560 Beta vulgaris HOM05D006967 ORTHO05D008692 3.4e-21 106.7 408 25.5
arahy.Tifrunner.gnm1.ann1.IV6A0X Arachis hypogaea HOM05D006967 ORTHO05D008692 3.7e-20 103.2 379 24.5
arahy.Tifrunner.gnm1.ann1.S5Z5QJ Arachis hypogaea HOM05D006967 ORTHO05D008692 3.7e-20 103.2 379 24.5
QL11p010599 Quercus lobata HOM05D006967 ORTHO05D008692 8.3e-20 102.1 361 26.0
PGSC0003DMG402016926 Solanum tuberosum HOM05D006967 ORTHO05D008692 4.1e-19 99.8 331 26.3
Hund09497 Selenicereus undatus HOM05D006967 ORTHO05D008692 5.9e-18 95.9 367 24.0
SMO365G0010 Selaginella moellendorffii HOM05D006967 ORTHO05D008692 1.2e-15 88.2 42 97.6
Lalb_Chr09g0334571 Lupinus albus HOM05D006967 ORTHO05D008692 2.7e-15 87.0 203 30.0
Migut.M02039 Erythranthe guttata HOM05D006967 ORTHO05D008692 3.6e-15 86.7 192 30.2
Migut.G00899 Erythranthe guttata HOM05D006967 ORTHO05D008692 6.1e-15 85.9 192 29.7
Migut.K01517 Erythranthe guttata HOM05D006967 ORTHO05D008692 8.0e-15 85.5 192 30.2
arahy.Tifrunner.gnm1.ann1.B3JMJ8 Arachis hypogaea HOM05D006967 ORTHO05D008692 1.2e-13 81.6 193 30.6
Psat4g112640 Pisum sativum HOM05D006967 ORTHO05D008692 1.2e-13 81.6 187 29.4
TAR624G1073 Trochodendron aralioides HOM05D006967 ORTHO05D008692 3.4e-13 80.1 224 29.0
Phvul.003G274600 Phaseolus vulgaris HOM05D006967 ORTHO05D008692 4.9e-12 76.3 191 28.8
Ah.11g050600 Amaranthus hybridus HOM05D006967 ORTHO05D008692 1.1e-11 75.1 124 33.9
Glyma.16G096000 Glycine max HOM05D006967 ORTHO05D008692 2.4e-11 73.9 189 28.6
Ca_22538_v3 Cicer arietinum L. HOM05D006967 ORTHO05D008692 4.1e-11 73.2 232 27.6
Zm00001eb158090 Zea mays HOM05D006967 ORTHO05D008692 7.0e-11 72.4 180 29.4
Dinv05283 Davidia involucrata HOM05D006967 ORTHO05D008692 9.1e-11 72.0 168 31.0
COL.COLO4_10527 Corchorus olitorius HOM05D001999 ORTHO05D001994 1.2e-10 71.6 118 36.4
Nitab4.5_0001253g0030 Nicotiana tabacum HOM05D006967 ORTHO05D008692 1.2e-10 71.6 173 30.6
Ciclev10015668m.g Citrus clementina HOM05D006967 ORTHO05D008692 1.6e-10 71.2 173 27.7
FAN25G2282 Fragaria x ananassa HOM05D006967 ORTHO05D008692 4.5e-10 69.7 182 28.6
Sc05g0001460 Simmondsia chinensis HOM05D006967 ORTHO05D008692 1.7e-09 67.8 113 34.5


User provided reference genes

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