Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO174G0079 Selaginella moellendorffii HOM05D005981 ORTHO05D007551 2.1e-174 615.5 301 100.0
SMO308G0008 Selaginella moellendorffii HOM05D005981 ORTHO05D007551 2.6e-79 299.7 180 82.8
SMO271G0041 Selaginella moellendorffii HOM05D005981 ORTHO05D007551 9.8e-79 297.7 180 82.8
SMO174G0158 Selaginella moellendorffii HOM05D005981 ORTHO05D007551 6.8e-64 248.4 181 72.4
Mapoly0035s0044 Marchantia polymorpha HOM05D005981 ORTHO05D007551 6.4e-38 162.2 178 44.4
arahy.Tifrunner.gnm1.ann1.SEU8EV Arachis hypogaea HOM05D005981 ORTHO05D007551 2.1e-36 157.1 240 38.8
ATR1134G043 Amborella trichopoda HOM05D005981 ORTHO05D007551 4.6e-36 156.0 180 44.4
Sed0004103 Sechium edule HOM05D005981 ORTHO05D007551 4.6e-36 156.0 179 43.6
arahy.Tifrunner.gnm1.ann1.VB64T6 Arachis hypogaea HOM05D005981 ORTHO05D007551 1.3e-35 154.5 240 38.3
Aqoxy5G02601 Aquilegia oxysepala HOM05D005981 ORTHO05D007551 2.3e-35 153.7 219 40.2
MSTRG.1511 Avicennia marina HOM05D005981 ORTHO05D007551 8.7e-35 151.8 215 41.9
MELO3C008115.2 Cucumis melo HOM05D005981 ORTHO05D007551 8.7e-35 151.8 177 45.2
Eucgr.F04135 Eucalyptus grandis HOM05D005981 ORTHO05D007551 1.1e-34 151.4 266 35.0
Ciclev10001512m.g Citrus clementina HOM05D005981 ORTHO05D007551 1.5e-34 151.0 214 41.1
ClCG11G008230 Citrullus lanatus HOM05D005981 ORTHO05D007551 2.5e-34 150.2 177 44.6
CsaV3_2G033430 Cucumis sativus L. HOM05D005981 ORTHO05D007551 3.3e-34 149.8 177 44.1
Lj2g0016315 Lotus japonicus HOM05D005981 ORTHO05D007551 3.3e-34 149.8 223 39.5
Migut.C01243 Erythranthe guttata HOM05D005981 ORTHO05D007551 5.6e-34 149.1 177 44.6
Solyc11g017230.2 Solanum lycopersicum HOM05D005981 ORTHO05D007551 7.3e-34 148.7 210 40.0
Sopen11g009130 Solanum pennellii HOM05D005981 ORTHO05D007551 7.3e-34 148.7 210 40.0
GSVIVG01034499001 Vitis vinifera HOM05D005981 ORTHO05D007551 7.3e-34 148.7 181 44.8
CAN.G61.32 Capsicum annuum HOM05D005981 ORTHO05D007551 1.2e-33 147.9 209 39.2
THA.LOC104806782 Tarenaya hassleriana HOM05D005981 ORTHO05D007551 1.2e-33 147.9 222 39.6
Gorai.009G289700 Gossypium raimondii HOM05D005981 ORTHO05D007551 1.6e-33 147.5 181 45.3
unitig_747.g21468 Utricularia gibba HOM05D005981 ORTHO05D007551 1.6e-33 147.5 177 46.9
Gohir.A05G274500 Gossypium hirsutum HOM05D005981 ORTHO05D007551 2.8e-33 146.7 181 45.3
Pp3c1_23520 Physcomitrium patens HOM05D005981 ORTHO05D007551 2.8e-33 146.7 179 43.0
CiPaw.16G062400 Carya illinoinensis HOM05D005981 ORTHO05D007551 3.6e-33 146.4 177 44.6
HanXRQChr04g0107411 Helianthus annuus HOM05D005981 ORTHO05D007551 1.1e-32 144.8 188 42.0
Os01g0874800 Oryza sativa ssp. japonica HOM05D005981 ORTHO05D007551 1.1e-32 144.8 233 38.2
Phvul.004G084494 Phaseolus vulgaris HOM05D005981 ORTHO05D007551 1.4e-32 144.4 210 39.5
Atru.chr13.1816 Acer truncatum HOM05D005981 ORTHO05D007551 1.8e-32 144.1 217 39.6
Atru.chr13.1806 Acer truncatum HOM05D005981 ORTHO05D007551 3.1e-32 143.3 217 39.6
Gohir.D05G276700 Gossypium hirsutum HOM05D005981 ORTHO05D007551 3.1e-32 143.3 181 44.8
TAR381G0932 Trochodendron aralioides HOM05D005981 ORTHO05D007551 3.1e-32 143.3 176 42.6
Glyma.16G156300 Glycine max HOM05D005981 ORTHO05D007551 4.0e-32 142.9 177 44.1
EL10Ac1g00070 Beta vulgaris HOM05D005981 ORTHO05D007551 6.9e-32 142.1 184 43.5
CSS0002602 Camellia sinensis var. sinensis HOM05D005981 ORTHO05D007551 9.0e-32 141.7 217 38.7
Thecc.08G202800 Theobroma cacao HOM05D005981 ORTHO05D007551 9.0e-32 141.7 181 44.8
CSS0046436 Camellia sinensis var. sinensis HOM05D005981 ORTHO05D007551 1.2e-31 141.4 183 42.1
Duzib177G0330 Durio zibethinus HOM05D005981 ORTHO05D007551 1.2e-31 141.4 183 43.2
MBI17_g15293_MAGBIO Magnolia biondii HOM05D005981 ORTHO05D007551 1.2e-31 141.4 210 37.6
Lj7A293G47 Lonicera japonica HOM05D005981 ORTHO05D007551 1.5e-31 141.0 214 37.9
Medtr6g033525 Medicago truncatula HOM05D005981 ORTHO05D007551 1.5e-31 141.0 177 43.5
FAN20G1782 Fragaria x ananassa HOM05D005981 ORTHO05D007551 2.6e-31 140.2 183 41.5
AUR62023576 Chenopodium quinoa HOM05D005981 ORTHO05D007551 3.4e-31 139.8 181 41.4
Lsat_1_v5_gn_1_10481 Lactuca sativa HOM05D005981 ORTHO05D007551 3.4e-31 139.8 209 38.8
Prupe.8G055700 Prunus persica HOM05D005981 ORTHO05D007551 4.4e-31 139.4 181 41.4
PGR119G0141 Punica granatum HOM05D005981 ORTHO05D007551 5.8e-31 139.0 177 43.5
MD10G1046800 Malus domestica HOM05D005981 ORTHO05D007551 7.6e-31 138.7 181 41.4
QL02p034064 Quercus lobata HOM05D005981 ORTHO05D007551 7.6e-31 138.7 177 42.9
Hund27079 Selenicereus undatus HOM05D005981 ORTHO05D007551 7.6e-31 138.7 183 41.5
Sc23g0001130 Simmondsia chinensis HOM05D005981 ORTHO05D007551 7.6e-31 138.7 179 41.9
Manes.18G100000 Manihot esculenta HOM05D005981 ORTHO05D007551 9.9e-31 138.3 176 42.6
SGA_v2.0_scaffold118G32466 Striga asiatica HOM05D005981 ORTHO05D007551 9.9e-31 138.3 180 43.3
FAN27G0258 Fragaria x ananassa HOM05D005981 ORTHO05D007551 1.3e-30 137.9 183 41.0
Sabra13G0096800 Salix brachista HOM05D005981 ORTHO05D008130 1.3e-30 137.9 183 43.7
AUR62004659 Chenopodium quinoa HOM05D005981 ORTHO05D007551 2.2e-30 137.1 181 40.9
Thhalv10008072m.g Eutrema salsugineum HOM05D005981 ORTHO05D007551 2.2e-30 137.1 185 43.2
AL1G48940 Arabidopsis lyrata HOM05D005981 ORTHO05D007551 2.9e-30 136.7 135 51.9
Actinidia23324 Actinidia chinensis HOM05D005981 ORTHO05D007551 3.8e-30 136.3 182 42.3
A09p32090 Brassica napus HOM05D005981 ORTHO05D007551 3.8e-30 136.3 141 50.4
BraA09t38748Z Brassica rapa HOM05D005981 ORTHO05D007551 3.8e-30 136.3 141 50.4
Potri.013G114400 Populus trichocarpa HOM05D005981 ORTHO05D007551 3.8e-30 136.3 180 43.3
Carub.0001s3253 Capsella rubella HOM05D005981 ORTHO05D007551 4.9e-30 136.0 141 48.9
BcaB07g33127 Brassica carinata HOM05D005981 ORTHO05D007551 8.4e-30 135.2 141 49.6
FvH4_2g12160 Fragaria vesca HOM05D005981 ORTHO05D007551 8.4e-30 135.2 209 37.8
BcaC08g43776 Brassica carinata HOM05D005981 ORTHO05D007551 1.1e-29 134.8 141 49.6
BolC6t36287H Brassica oleracea HOM05D005981 ORTHO05D007551 1.1e-29 134.8 141 49.6
FAN24G2303 Fragaria x ananassa HOM05D005981 ORTHO05D007551 1.1e-29 134.8 209 37.8
PSO017G5512 Papaver somniferum HOM05D005981 ORTHO05D007551 1.1e-29 134.8 179 40.2
Zm00001eb146190 Zea mays HOM05D005981 ORTHO05D007551 1.1e-29 134.8 181 40.9
AT1G34380 Arabidopsis thaliana HOM05D005981 ORTHO05D007551 1.4e-29 134.4 140 50.0
C06p11540 Brassica napus HOM05D005981 ORTHO05D007551 1.4e-29 134.4 141 48.9
CARHR033840 Cardamine hirsuta HOM05D005981 ORTHO05D007551 1.4e-29 134.4 140 50.0
Sp1g29600 Schrenkiella parvula HOM05D005981 ORTHO05D007551 1.4e-29 134.4 181 42.0
Psat1g098600 Pisum sativum HOM05D005981 ORTHO05D007551 1.9e-29 134.0 176 44.9
Nitab4.5_0006099g0030 Nicotiana tabacum HOM05D005981 ORTHO05D007551 3.2e-29 133.3 255 36.1
CANSAT56G4197 Cannabis sativa HOM05D005981 ORTHO05D007551 4.2e-29 132.9 208 38.9
Cc00_g04830 Coffea canephora HOM05D005981 ORTHO05D007551 5.4e-29 132.5 177 41.2
RcHm_v2.0_Chr6g0272141 Rosa chinensis HOM05D005981 ORTHO05D007551 7.1e-29 132.1 174 41.4
TPR.G36660 Trifolium pratense HOM05D005981 ORTHO05D007551 9.3e-29 131.7 180 42.8
Nitab4.5_0000159g0230 Nicotiana tabacum HOM05D005981 ORTHO05D007551 1.0e-27 128.3 210 37.6
Ca_14000_v3 Cicer arietinum L. HOM05D005981 ORTHO05D007551 1.3e-27 127.9 203 39.9
CDE06G1238 Ceratophyllum demersum HOM05D005981 ORTHO05D007551 1.5e-26 124.4 179 39.1
Aa31LG6G8450 Aethionema arabicum HOM05D005981 ORTHO05D007551 4.3e-26 122.9 140 45.7
Rhsim04G0161600 Rhododendron simsii HOM05D005981 ORTHO05D007551 2.4e-24 117.1 178 40.4
Rhsim06G0097100 Rhododendron simsii HOM05D005981 ORTHO05D007551 2.4e-24 117.1 178 40.4
Peaxi162Scf00495g00015 Petunia axillaris HOM05D005981 ORTHO05D007551 4.0e-24 116.3 177 40.7
Zm00001eb366510 Zea mays HOM05D005981 ORTHO05D007551 4.0e-24 116.3 136 44.9
Oeu021010.1 Olea europaea HOM05D005981 ORTHO05D007551 8.4e-22 108.6 138 44.9
DCAR_023098 Daucus carota HOM05D005981 ORTHO05D007551 5.4e-21 105.9 135 44.4
Dinv41690 Davidia involucrata HOM05D005981 ORTHO05D007551 7.1e-21 105.5 121 46.3
SalBow7G4031 Salvia bowleyana HOM05D006403 ORTHO05D008130 2.7e-20 103.6 184 36.4
TWI60G0628 Tripterygium wilfordii HOM05D005981 ORTHO05D007551 4.6e-20 102.8 173 38.2
HPP92_000088 Vanilla planifolia HOM05D005981 ORTHO05D007551 2.5e-18 97.1 136 40.4
Zm00001eb366480 Zea mays HOM05D005981 ORTHO05D007551 3.3e-18 96.7 176 35.2
Lalb_Chr03g0035891 Lupinus albus HOM05D005981 ORTHO05D007551 1.6e-17 94.4 99 46.5
MD05G1040800 Malus domestica HOM05D005981 ORTHO05D007551 3.7e-17 93.2 154 38.3
vmacro12496 Vaccinium macrocarpon HOM05D005981 ORTHO05D007551 6.2e-17 92.4 116 47.4
HPP92_000083 Vanilla planifolia HOM05D005981 ORTHO05D007551 2.9e-14 83.6 125 36.8
CBR_g56098 Chara braunii HOM05D005981 ORTHO05D007551 1.6e-12 77.8 180 31.7
Ca_13999_v3 Cicer arietinum L. HOM05D002058 ORTHO05D009216 1.8e-11 74.3 129 37.2
Ca_27969_v3 Cicer arietinum L. HOM05D005981 ORTHO05D007551 1.8e-11 74.3 124 37.9
AagrBONN_evm.TU.Sc2ySwM_344.1289 Anthoceros agrestis HOM05D005981 ORTHO05D007551 3.0e-11 73.6 86 46.5
arahy.Tifrunner.gnm1.ann1.XJI1XC Arachis hypogaea HOM05D005981 ORTHO05D007551 3.9e-11 73.2 238 26.1
HPP92_000081 Vanilla planifolia HOM05D005981 ORTHO05D007551 2.5e-10 70.5 86 43.0
AagrBONN_evm.TU.Sc2ySwM_228.5815 Anthoceros agrestis HOM05D005531 ORTHO05D006332 3.4e-07 60.1 110 34.5
Lalb_Chr03g0035881 Lupinus albus HOM05D005981 ORTHO05D007551 1.3e-06 58.2 112 35.7
Glyma.07G208400 Glycine max HOM05D005531 ORTHO05D006332 2.9e-06 57.0 97 35.1
MCO14G121 Micromonas commoda HOM05D005531 ORTHO05D006332 3.8e-06 56.6 100 34.0
PRCOL_00004663 Prasinoderma coloniale HOM05D005531 ORTHO05D006332 3.8e-06 56.6 161 29.2
Ah.05g177990 Amaranthus hybridus HOM05D005981 ORTHO05D001449 4.9e-06 56.2 79 39.2
Psat7g121280 Pisum sativum HOM05D005531 ORTHO05D006332 4.9e-06 56.2 97 36.1
AagrBONN_evm.TU.Sc2ySwM_228.1809 Anthoceros agrestis HOM05D005531 ORTHO05D006332 8.4e-06 55.5 114 33.3


User provided reference genes

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