Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO172G0175 Selaginella moellendorffii HOM05D005537 ORTHO05D006776 1.5e-227 792.7 457 100.0
CARHR192210 Cardamine hirsuta HOM05D005537 ORTHO05D006776 1.3e-45 188.3 447 29.8
Mapoly0006s0254 Marchantia polymorpha HOM05D005537 ORTHO05D006776 3.7e-45 186.8 555 29.9
CANSAT01G2612 Cannabis sativa HOM05D005537 ORTHO05D006776 1.0e-42 178.7 490 28.2
Carub.0006s1893 Capsella rubella HOM05D005537 ORTHO05D006776 1.3e-42 178.3 449 29.6
AL6G32140 Arabidopsis lyrata HOM05D005537 ORTHO05D006776 5.0e-42 176.4 461 29.1
AT5G20600 Arabidopsis thaliana HOM05D005537 ORTHO05D006776 1.1e-41 175.3 460 29.6
Thhalv10013208m.g Eutrema salsugineum HOM05D005537 ORTHO05D006776 4.2e-41 173.3 456 28.5
THA.LOC104799619 Tarenaya hassleriana HOM05D005537 ORTHO05D006776 4.2e-41 173.3 474 27.8
BcaB08g36512 Brassica carinata HOM05D005537 ORTHO05D006776 7.2e-41 172.6 448 28.6
BcaC04g19447 Brassica carinata HOM05D005537 ORTHO05D006776 7.2e-41 172.6 454 28.9
BolC9t58429H Brassica oleracea HOM05D005537 ORTHO05D006776 9.4e-41 172.2 459 29.0
BraA10t44018Z Brassica rapa HOM05D005537 ORTHO05D006776 1.6e-40 171.4 447 28.9
PGR044G0610 Punica granatum HOM05D005537 ORTHO05D006776 2.7e-40 170.6 484 27.5
Aa31LG1G14080 Aethionema arabicum HOM05D005537 ORTHO05D006776 6.1e-40 169.5 456 29.4
C09p55630 Brassica napus HOM05D005537 ORTHO05D006776 8.0e-40 169.1 460 28.7
Pp3c17_1280 Physcomitrium patens HOM05D005537 ORTHO05D006776 1.0e-39 168.7 248 38.3
A10p19410 Brassica napus HOM05D005537 ORTHO05D006776 1.8e-39 167.9 447 28.6
Sp6g23880 Schrenkiella parvula HOM05D005537 ORTHO05D006776 1.8e-39 167.9 460 28.0
VMungo1215G0900 Vigna mungo HOM05D005537 ORTHO05D006776 5.2e-39 166.4 507 27.2
Haze_22074 Corylus avellana HOM05D005537 ORTHO05D006776 6.7e-39 166.0 480 28.5
Duzib041G0776 Durio zibethinus HOM05D005537 ORTHO05D006776 6.7e-39 166.0 491 25.7
Ca_21044_v3 Cicer arietinum L. HOM05D005537 ORTHO05D006776 3.3e-38 163.7 440 27.5
MBI14_g19455_MAGBIO Magnolia biondii HOM05D005537 ORTHO05D006776 3.3e-38 163.7 470 27.7
SMO012G0033 Selaginella moellendorffii HOM05D005537 ORTHO05D006776 4.4e-38 163.3 450 29.8
CiPaw.07G200800 Carya illinoinensis HOM05D005537 ORTHO05D006776 9.7e-38 162.2 477 27.3
Cfa013489 Carpinus fangiana HOM05D005537 ORTHO05D006776 1.3e-37 161.8 478 26.6
COL.COLO4_28459 Corchorus olitorius HOM05D005537 ORTHO05D006776 1.7e-37 161.4 481 26.8
Glyma.13G103200 Glycine max HOM05D005537 ORTHO05D006776 1.7e-37 161.4 505 25.7
Prupe.1G069700 Prunus persica HOM05D005537 ORTHO05D006776 2.8e-37 160.6 476 28.4
Thecc.08G084500 Theobroma cacao HOM05D005537 ORTHO05D006776 6.3e-37 159.5 481 26.2
MD13G1237200 Malus domestica HOM05D005537 ORTHO05D006776 1.1e-36 158.7 482 28.8
Ciclev10010385m.g Citrus clementina HOM05D005537 ORTHO05D006776 1.4e-36 158.3 490 26.1
MD16G1242600 Malus domestica HOM05D005537 ORTHO05D006776 1.4e-36 158.3 476 28.6
CDE05G2659 Ceratophyllum demersum HOM05D005537 ORTHO05D006776 3.1e-36 157.1 503 25.0
vmacro19325 Vaccinium macrocarpon HOM05D005537 ORTHO05D006776 3.1e-36 157.1 485 27.8
Gorai.002G136300 Gossypium raimondii HOM05D005537 ORTHO05D006776 5.3e-36 156.4 479 26.7
Lalb_Chr13g0299751 Lupinus albus HOM05D005537 ORTHO05D006776 5.3e-36 156.4 467 29.8
Gohir.D06G023000 Gossypium hirsutum HOM05D005537 ORTHO05D006776 7.0e-36 156.0 479 25.3
BolC3t13639H Brassica oleracea HOM05D005537 ORTHO05D006776 1.2e-35 155.2 436 26.6
Gohir.A06G025900 Gossypium hirsutum HOM05D005537 ORTHO05D006776 1.2e-35 155.2 487 25.3
TAR624G0592 Trochodendron aralioides HOM05D005537 ORTHO05D006776 1.2e-35 155.2 485 26.0
Lsat_1_v5_gn_6_25660 Lactuca sativa HOM05D005537 ORTHO05D006776 1.6e-35 154.8 476 26.1
Aqoxy5G04373 Aquilegia oxysepala HOM05D005537 ORTHO05D006776 2.0e-35 154.5 508 26.8
Psat4g004960 Pisum sativum HOM05D005537 ORTHO05D006776 4.5e-35 153.3 461 27.1
TPR.G37121 Trifolium pratense HOM05D005537 ORTHO05D006776 4.5e-35 153.3 512 26.2
Medtr4g133100 Medicago truncatula HOM05D005537 ORTHO05D006776 5.9e-35 152.9 469 27.1
Rhsim08G0162000 Rhododendron simsii HOM05D005537 ORTHO05D006776 5.9e-35 152.9 484 27.1
PSO063G7542 Papaver somniferum HOM05D005537 ORTHO05D006776 7.7e-35 152.5 493 26.4
FAN17G0445 Fragaria x ananassa HOM05D005537 ORTHO05D006776 1.0e-34 152.1 473 28.3
Gorai.010G027600 Gossypium raimondii HOM05D005537 ORTHO05D006776 1.0e-34 152.1 479 24.6
CDE05G3054 Ceratophyllum demersum HOM05D005537 ORTHO05D006776 1.7e-34 151.4 527 25.6
Sabra15G0023400 Salix brachista HOM05D005537 ORTHO05D006776 1.7e-34 151.4 490 25.7
AUR62021325 Chenopodium quinoa HOM05D005537 ORTHO05D006776 2.2e-34 151.0 435 26.0
Manes.02G080100 Manihot esculenta HOM05D005537 ORTHO05D006776 2.2e-34 151.0 470 27.0
RhsimUnG0132200 Rhododendron simsii HOM05D005537 ORTHO05D006776 2.2e-34 151.0 484 26.9
ClCG11G011540 Citrullus lanatus HOM05D005537 ORTHO05D006776 2.9e-34 150.6 481 26.2
Lj2g0020928 Lotus japonicus HOM05D005537 ORTHO05D006776 2.9e-34 150.6 479 26.1
Sed0009431 Sechium edule HOM05D005537 ORTHO05D006776 6.5e-34 149.4 487 25.9
FAN07G2345 Fragaria x ananassa HOM05D005537 ORTHO05D006776 8.5e-34 149.1 479 27.1
Lju50A4T51 Lonicera japonica HOM05D005537 ORTHO05D006776 8.5e-34 149.1 486 27.2
PSO170G0047 Papaver somniferum HOM05D005537 ORTHO05D006776 8.5e-34 149.1 501 26.1
Atru.chr2.2727 Acer truncatum HOM05D005537 ORTHO05D006776 1.1e-33 148.7 468 25.9
ECA233G0023 Erigeron canadensis HOM05D005537 ORTHO05D006776 1.1e-33 148.7 483 25.5
arahy.Tifrunner.gnm1.ann1.HQKU7C Arachis hypogaea HOM05D005537 ORTHO05D006776 1.5e-33 148.3 469 26.4
arahy.Tifrunner.gnm1.ann1.W452X0 Arachis hypogaea HOM05D005537 ORTHO05D006776 1.5e-33 148.3 473 26.6
FvH4_4g06690 Fragaria vesca HOM05D005537 ORTHO05D006776 1.9e-33 147.9 476 27.3
FAN12G0761 Fragaria x ananassa HOM05D005537 ORTHO05D006776 1.9e-33 147.9 476 27.1
FAN22G0220 Fragaria x ananassa HOM05D005537 ORTHO05D006776 3.2e-33 147.1 475 27.2
Lju432C4G13 Lonicera japonica HOM05D005537 ORTHO05D006776 1.2e-32 145.2 411 26.8
Sabra12G0025000 Salix brachista HOM05D005537 ORTHO05D006776 1.2e-32 145.2 489 24.5
MELO3C003946.2 Cucumis melo HOM05D005537 ORTHO05D006776 1.6e-32 144.8 486 26.3
Psat2g005840 Pisum sativum HOM05D005537 ORTHO05D006776 1.6e-32 144.8 416 26.7
Duzib093G2104 Durio zibethinus HOM05D005537 ORTHO05D006776 2.1e-32 144.4 488 24.2
HanXRQChr13g0401171 Helianthus annuus HOM05D005537 ORTHO05D006776 2.1e-32 144.4 478 27.4
SGA_v2.0_scaffold12G06075 Striga asiatica HOM05D005537 ORTHO05D006776 2.1e-32 144.4 497 25.4
Potri.012G036500 Populus trichocarpa HOM05D005537 ORTHO05D006776 3.6e-32 143.7 495 23.8
Cc06_g13120 Coffea canephora HOM05D005537 ORTHO05D006776 6.1e-32 142.9 494 25.1
Dinv25489 Davidia involucrata HOM05D005537 ORTHO05D006776 6.1e-32 142.9 496 26.2
CSS0042006 Camellia sinensis var. sinensis HOM05D005537 ORTHO05D006776 1.4e-31 141.7 489 26.0
CSS0045027 Camellia sinensis var. sinensis HOM05D005537 ORTHO05D006776 1.4e-31 141.7 489 26.0
Gohir.A01G123800 Gossypium hirsutum HOM05D005537 ORTHO05D006776 1.4e-31 141.7 479 26.1
Os04g0658600 Oryza sativa ssp. japonica HOM05D005537 ORTHO05D006776 1.4e-31 141.7 474 27.4
SEGI_27163 Sequoiadendron giganteum HOM05D005537 ORTHO05D006776 3.0e-31 140.6 482 27.4
Pp3c12_970 Physcomitrium patens HOM05D005537 ORTHO05D006776 4.0e-31 140.2 228 34.6
unitig_899.g15473 Utricularia gibba HOM05D005537 ORTHO05D006776 5.2e-31 139.8 491 26.1
Psat2g005880 Pisum sativum HOM05D005537 ORTHO05D006776 1.2e-30 138.7 439 26.0
Sc18g0003000 Simmondsia chinensis HOM05D005537 ORTHO05D006776 1.5e-30 138.3 493 24.5
Sed0014380 Sechium edule HOM05D005537 ORTHO05D006776 4.4e-30 136.7 473 25.4
Ah.09g230210 Amaranthus hybridus HOM05D005537 ORTHO05D006776 5.7e-30 136.3 476 23.7
MSTRG.26216 Avicennia marina HOM05D005537 ORTHO05D006776 1.3e-29 135.2 490 24.9
Migut.K00238 Erythranthe guttata HOM05D005537 ORTHO05D006776 1.3e-29 135.2 479 24.2
TWI63G1753 Tripterygium wilfordii HOM05D005537 ORTHO05D006776 1.7e-29 134.8 531 23.7
Peaxi162Scf00231g10125 Petunia axillaris HOM05D005537 ORTHO05D006776 2.8e-29 134.0 501 23.8
Sopen07g006800 Solanum pennellii HOM05D005537 ORTHO05D006776 4.8e-29 133.3 499 23.8
PGSC0003DMG400004098 Solanum tuberosum HOM05D005537 ORTHO05D006776 6.3e-29 132.9 499 24.0
QL11p009893 Quercus lobata HOM05D005537 ORTHO05D006776 8.2e-29 132.5 496 24.2
SHI03078 Sapria himalayana HOM05D005537 ORTHO05D006776 1.1e-28 132.1 519 23.9
HPP92_018575 Vanilla planifolia HOM05D005537 ORTHO05D006776 1.1e-28 132.1 494 26.3
Nitab4.5_0000055g0260 Nicotiana tabacum HOM05D005537 ORTHO05D006776 1.8e-28 131.3 518 25.3
Solyc07g017940.1 Solanum lycopersicum HOM05D005537 ORTHO05D006776 1.8e-28 131.3 510 23.1
Zm00001eb067650 Zea mays HOM05D005537 ORTHO05D006776 3.1e-28 130.6 490 26.1
TPR.G1254 Trifolium pratense HOM05D005537 ORTHO05D006776 4.1e-28 130.2 448 24.3
Gohir.D01G111500 Gossypium hirsutum HOM05D005537 ORTHO05D006776 7.0e-28 129.4 238 31.1
ATR0580G047 Amborella trichopoda HOM05D005537 ORTHO05D006776 1.2e-27 128.6 242 31.0
AagrBONN_evm.TU.Sc2ySwM_228.2028 Anthoceros agrestis HOM05D005537 ORTHO05D006776 2.0e-27 127.9 606 24.6
RcHm_v2.0_Chr4g0398601 Rosa chinensis HOM05D005537 ORTHO05D006776 2.7e-27 127.5 246 32.1
Eucgr.C02216 Eucalyptus grandis HOM05D005537 ORTHO05D006776 5.9e-27 126.3 489 24.5
CiPaw.08G029800 Carya illinoinensis HOM05D005537 ORTHO05D006776 7.7e-27 125.9 281 28.5
CsaV3_2G008990 Cucumis sativus L. HOM05D005537 ORTHO05D006776 3.8e-26 123.6 233 30.0
SGA_v2.0_scaffold17G07935 Striga asiatica HOM05D005537 ORTHO05D006776 3.8e-26 123.6 494 24.1
GSVIVG01029258001 Vitis vinifera HOM05D008207 ORTHO05D010373 6.5e-26 122.9 237 32.1
Cpa.g.sc115.49 Carica papaya HOM05D005537 ORTHO05D006776 1.9e-25 121.3 316 27.8
Nn8g40421 Nelumbo nucifera HOM05D005537 ORTHO05D006776 1.2e-24 118.6 495 25.7
CAN.G1186.23 Capsicum annuum HOM05D005537 ORTHO05D006776 2.1e-24 117.9 516 24.8
Nitab4.5_0004772g0040 Nicotiana tabacum HOM05D005537 ORTHO05D006776 2.7e-24 117.5 511 24.5
SEGI_41129 Sequoiadendron giganteum HOM05D005537 ORTHO05D006776 8.0e-24 115.9 574 22.8
BcaB01g04778 Brassica carinata HOM05D005537 ORTHO05D006776 1.4e-23 115.2 418 25.4
DCAR_017989 Daucus carota HOM05D005537 ORTHO05D006776 1.8e-23 114.8 534 22.5
A03p10160 Brassica napus HOM05D005537 ORTHO05D006776 3.4e-22 110.5 404 24.5
C03p11680 Brassica napus HOM05D002335 ORTHO05D006282 3.4e-22 110.5 432 24.5
unitig_746.g26559 Utricularia gibba HOM05D005537 ORTHO05D006776 7.5e-22 109.4 231 28.6
AUR62033242 Chenopodium quinoa HOM05D008207 ORTHO05D010373 2.2e-21 107.8 371 25.6
BraA03t10326Z Brassica rapa HOM05D005537 ORTHO05D006776 1.1e-20 105.5 176 32.4
Cre01.g019200 Chlamydomonas reinhardtii HOM05D005537 ORTHO05D006776 3.8e-18 97.1 231 29.4
Zm00001eb432550 Zea mays HOM05D005537 ORTHO05D006776 3.8e-18 97.1 288 25.0
CBR_g32208 Chara braunii HOM05D005537 ORTHO05D006776 1.2e-16 92.0 250 28.4
PRCOL_00002161 Prasinoderma coloniale HOM05D005537 ORTHO05D006776 7.0e-12 76.3 200 26.0
Glyma.17G055832 Glycine max HOM05D005537 ORTHO05D006776 2.7e-11 74.3 110 42.7
EL10Ac8g18309 Beta vulgaris HOM05D005537 ORTHO05D006776 1.0e-10 72.4 81 49.4
Cc00_g32040 Coffea canephora HOM05D005537 ORTHO05D006776 3.8e-10 70.5 102 30.4
FvH4_5g34681 Fragaria vesca HOM05D005537 ORTHO05D006776 2.5e-09 67.8 105 33.3
Oeu009853.2 Olea europaea HOM05D005537 ORTHO05D006776 2.5e-09 67.8 69 52.2
SEGI_03037 Sequoiadendron giganteum HOM05D005537 ORTHO05D006776 1.2e-08 65.5 81 49.4
Actinidia01575 Actinidia chinensis HOM05D005537 ORTHO05D006776 2.8e-08 64.3 431 22.0
unitig_746.g26560 Utricularia gibba HOM05D005537 ORTHO05D006776 2.8e-08 64.3 93 39.8
MCO12G389 Micromonas commoda HOM05D005537 ORTHO05D006776 1.5e-06 58.5 129 27.1


User provided reference genes

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