Gene: AT5G20600

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G20600
  • Transcript Identifier AT5G20600.1
  • Gene Type Coding gene
  • Location Chr5 : 6966345-6967943 : negative

Gene Family Information

  • ID HOM05D005537
  • #Genes/#Species 139/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G20600.1
  • uniprot Q8RY12

Descriptions

  • Description ribosomal RNA processing-like protein
  • Computational description FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: preribosome, small subunit precursor; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleolar, Nop52 (InterPro:IPR010301); Has 543 Blast hits to 530 proteins in 201 species: Archae - 0; Bacteria - 10; Metazoa - 211; Fungi - 164; Plants - 46; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006364
IEA
GOA DatabaserRNA processing
GO:0006364
IBA
Gene OntologyrRNA processing1
GO:0006364
IEA
InterProrRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003674
ND
Gene Ontologymolecular_function

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM, IBA
Gene Ontologynucleus1
GO:0030688
IEA
Gene Ontologypreribosome, small subunit precursor
GO:0030688
IEA
InterPropreribosome, small subunit precursor
GO:0030687
IBA
Gene Ontologypreribosome, large subunit precursor1
GO:0005829
IDA
GOA Databasecytosol

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010301 Nucleolar, Nop52
Mapman id Description
17.1.1.5 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.rRNA processing factor (RRP1)