Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO170G0018 Selaginella moellendorffii HOM05D003177 ORTHO05D003481 0.0e+00 1135.6 656 100.0
Pp3c12_4690 Physcomitrium patens HOM05D015612 ORTHO05D003481 3.2e-42 177.6 696 29.7
Nn1g03661 Nelumbo nucifera HOM05D003177 ORTHO05D003481 3.6e-25 120.9 520 32.9
Lj3g0020379 Lotus japonicus HOM05D003177 ORTHO05D003481 2.3e-24 118.2 530 23.0
Ah.06g183030 Amaranthus hybridus HOM05D003177 ORTHO05D003481 3.9e-24 117.5 525 21.1
Ca_18849_v3 Cicer arietinum L. HOM05D000068 ORTHO05D000084 3.9e-24 117.5 530 22.5
AagrBONN_evm.TU.Sc2ySwM_369.261 Anthoceros agrestis HOM05D015612 ORTHO05D003481 8.8e-24 116.3 229 35.8
Psat7g161600 Pisum sativum HOM05D003177 ORTHO05D003481 1.5e-23 115.5 532 22.0
ATR0794G044 Amborella trichopoda HOM05D003177 ORTHO05D003481 2.0e-23 115.2 363 24.2
CiPaw.11G183800 Carya illinoinensis HOM05D003177 ORTHO05D003481 4.4e-23 114.0 525 22.1
Oeu007628.1 Olea europaea HOM05D003177 ORTHO05D003481 2.8e-22 111.3 510 21.0
Nitab4.5_0000397g0040 Nicotiana tabacum HOM05D003177 ORTHO05D003481 8.2e-22 109.8 552 19.6
FvH4_7g08040 Fragaria vesca HOM05D003177 ORTHO05D003481 1.2e-20 105.9 519 22.2
FAN21G3709 Fragaria x ananassa HOM05D003177 ORTHO05D003481 1.2e-20 105.9 520 22.1
BcaC04g21326 Brassica carinata HOM05D003177 ORTHO05D003481 2.6e-20 104.8 539 21.0
FAN03G0141 Fragaria x ananassa HOM05D003177 ORTHO05D003481 2.6e-20 104.8 527 21.3
FAN01G1176 Fragaria x ananassa HOM05D003177 ORTHO05D003481 4.5e-20 104.0 522 22.2
FAN06G1056 Fragaria x ananassa HOM05D003177 ORTHO05D003481 4.5e-20 104.0 517 22.1
Cc05_g13250 Coffea canephora HOM05D003177 ORTHO05D003481 5.9e-20 103.6 636 20.6
Pp3c10_3690 Physcomitrium patens HOM05D015612 ORTHO05D003481 1.3e-19 102.4 131 42.0
BcaB01g01838 Brassica carinata HOM05D003177 ORTHO05D003481 1.7e-19 102.1 463 22.5
Thhalv10028431m.g Eutrema salsugineum HOM05D003177 ORTHO05D003481 1.7e-19 102.1 548 20.3
SGA_v2.0_scaffold9G05037 Striga asiatica HOM05D003177 ORTHO05D003481 2.2e-19 101.7 631 20.1
Zm00001eb231370 Zea mays HOM05D003177 ORTHO05D003481 2.2e-19 101.7 533 21.2
Sp6g04150 Schrenkiella parvula HOM05D003177 ORTHO05D003481 2.9e-19 101.3 560 20.7
Carub.0007s1949 Capsella rubella HOM05D003177 ORTHO05D003481 6.5e-19 100.1 546 21.1
THA.LOC104813041 Tarenaya hassleriana HOM05D003177 ORTHO05D003481 8.5e-19 99.8 552 21.0
FAN25G3665 Fragaria x ananassa HOM05D003177 ORTHO05D003481 1.5e-18 99.0 510 21.8
Lalb_Chr19g0134751 Lupinus albus HOM05D003177 ORTHO05D003481 1.5e-18 99.0 529 31.9
Lj3g0022760 Lotus japonicus HOM05D003177 ORTHO05D003481 2.5e-18 98.2 362 23.5
C09p33110 Brassica napus HOM05D003177 ORTHO05D003481 3.2e-18 97.8 546 20.7
BolC9t56146H Brassica oleracea HOM05D003177 ORTHO05D003481 3.2e-18 97.8 546 20.7
COL.COLO4_09572 Corchorus olitorius HOM05D003177 ORTHO05D003481 3.2e-18 97.8 594 19.9
Phvul.011G140050 Phaseolus vulgaris HOM05D003177 ORTHO05D003481 3.2e-18 97.8 527 22.0
GSVIVG01014607001 Vitis vinifera HOM05D003177 ORTHO05D003481 5.5e-18 97.1 519 33.1
CDE12G0546 Ceratophyllum demersum HOM05D003177 ORTHO05D003481 7.2e-18 96.7 437 21.3
PGR031G3084 Punica granatum HOM05D003177 ORTHO05D003481 9.4e-18 96.3 517 20.9
A09p26090 Brassica napus HOM05D003177 ORTHO05D003481 3.6e-17 94.4 541 20.9
Eucgr.F03427 Eucalyptus grandis HOM05D003177 ORTHO05D003481 3.6e-17 94.4 520 29.6
Nitab4.5_0009192g0010 Nicotiana tabacum HOM05D003177 ORTHO05D003481 3.6e-17 94.4 569 18.6
Medtr4g081220 Medicago truncatula HOM05D003177 ORTHO05D003481 4.7e-17 94.0 533 21.4
Glyma.06G268800 Glycine max HOM05D003177 ORTHO05D003481 6.1e-17 93.6 529 20.8
Cpa.g.sc97.68 Carica papaya HOM05D003177 ORTHO05D003481 8.0e-17 93.2 435 21.6
TAR629G1976 Trochodendron aralioides HOM05D003177 ORTHO05D003481 8.0e-17 93.2 521 31.5
CARHR228640 Cardamine hirsuta HOM05D003177 ORTHO05D003481 1.0e-16 92.8 543 20.1
CAN.G337.147 Capsicum annuum HOM05D003177 ORTHO05D003481 1.8e-16 92.0 525 25.9
CANSAT11G2707 Cannabis sativa HOM05D003177 ORTHO05D003481 2.3e-16 91.7 507 21.5
Sc19g0005940 Simmondsia chinensis HOM05D003177 ORTHO05D003481 3.0e-16 91.3 269 24.5
BraA09t38176Z Brassica rapa HOM05D003177 ORTHO05D003481 5.2e-16 90.5 557 20.3
RcHm_v2.0_Chr4g0410111 Rosa chinensis HOM05D003177 ORTHO05D003481 5.2e-16 90.5 519 31.6
Lj4g0006066 Lotus japonicus HOM05D003177 ORTHO05D003481 6.7e-16 90.1 362 23.2
Sp7g20030 Schrenkiella parvula HOM05D003177 ORTHO05D003481 1.1e-15 89.4 524 19.8
Migut.H01856 Erythranthe guttata HOM05D003177 ORTHO05D003481 2.6e-15 88.2 525 24.6
Thhalv10024397m.g Eutrema salsugineum HOM05D003177 ORTHO05D003481 4.4e-15 87.4 566 20.5
A01p13180 Brassica napus HOM05D003177 ORTHO05D003481 5.7e-15 87.0 543 19.2
arahy.Tifrunner.gnm1.ann1.LL10MS Arachis hypogaea HOM05D003177 ORTHO05D003481 9.7e-15 86.3 551 20.3
Glyma.12G214200 Glycine max HOM05D003177 ORTHO05D003481 9.7e-15 86.3 472 29.0
Haze_09611 Corylus avellana HOM05D003177 ORTHO05D003481 1.3e-14 85.9 542 20.7
Sopen07g032250 Solanum pennellii HOM05D003177 ORTHO05D003481 1.3e-14 85.9 524 24.4
QL08p013320 Quercus lobata HOM05D003177 ORTHO05D003481 1.7e-14 85.5 430 27.9
Aqoxy4G02069 Aquilegia oxysepala HOM05D003177 ORTHO05D003481 2.2e-14 85.1 510 24.1
arahy.Tifrunner.gnm1.ann1.7VJC80 Arachis hypogaea HOM05D003177 ORTHO05D003481 2.2e-14 85.1 334 21.6
Actinidia10706 Actinidia chinensis HOM05D003177 ORTHO05D003481 3.7e-14 84.3 491 28.1
arahy.Tifrunner.gnm1.ann1.P62B18 Arachis hypogaea HOM05D003177 ORTHO05D003481 3.7e-14 84.3 334 21.3
Peaxi162Scf01086g00156 Petunia axillaris HOM05D003177 ORTHO05D003481 6.3e-14 83.6 522 26.1
arahy.Tifrunner.gnm1.ann1.W18Y25 Arachis hypogaea HOM05D003177 ORTHO05D003481 8.2e-14 83.2 334 21.0
Ciclev10008545m.g Citrus clementina HOM05D003177 ORTHO05D003481 8.2e-14 83.2 274 23.7
arahy.Tifrunner.gnm1.ann1.Y3PJTZ Arachis hypogaea HOM05D003177 ORTHO05D003481 1.1e-13 82.8 334 21.0
Lalb_Chr14g0366151 Lupinus albus HOM05D003177 ORTHO05D003481 1.1e-13 82.8 362 21.0
BcaC09g51192 Brassica carinata HOM05D003177 ORTHO05D003481 1.4e-13 82.4 543 19.0
CARHR252740 Cardamine hirsuta HOM05D003177 ORTHO05D003481 1.4e-13 82.4 290 23.4
Solyc07g064110.3 Solanum lycopersicum HOM05D003177 ORTHO05D003481 1.4e-13 82.4 524 29.0
AL6G48280 Arabidopsis lyrata HOM05D003177 ORTHO05D003481 1.8e-13 82.0 519 24.5
AT4G04790 Arabidopsis thaliana HOM05D003177 ORTHO05D003481 2.4e-13 81.6 542 24.4
AT4G21880 Arabidopsis thaliana HOM05D003177 ORTHO05D003481 3.1e-13 81.3 569 25.1
DCAR_008676 Daucus carota HOM05D003177 ORTHO05D003481 3.1e-13 81.3 269 24.9
Glyma.13G287400 Glycine max HOM05D003177 ORTHO05D003481 5.3e-13 80.5 367 21.3
CBR_g24294 Chara braunii HOM05D015612 ORTHO05D003481 9.1e-13 79.7 214 29.9
BolC1t01542H Brassica oleracea HOM05D003177 ORTHO05D003481 1.2e-12 79.3 503 19.7
CSS0012105 Camellia sinensis var. sinensis HOM05D003177 ORTHO05D003481 1.2e-12 79.3 522 30.5
Potri.001G417400 Populus trichocarpa HOM05D003177 ORTHO05D003481 1.2e-12 79.3 534 27.5
BcaNung02254 Brassica carinata HOM05D003177 ORTHO05D003481 3.5e-12 77.8 512 20.1
C01p15880 Brassica napus HOM05D003177 ORTHO05D003481 4.5e-12 77.4 543 19.0
arahy.Tifrunner.gnm1.ann1.2TAV4H Arachis hypogaea HOM05D003177 ORTHO05D003481 5.9e-12 77.0 527 27.1
AL7G32020 Arabidopsis lyrata HOM05D003177 ORTHO05D003481 7.7e-12 76.6 528 25.4
BraA01t01262Z Brassica rapa HOM05D003177 ORTHO05D003481 1.3e-11 75.9 508 20.3
SEGI_25291 Sequoiadendron giganteum HOM05D003177 ORTHO05D003481 1.7e-11 75.5 200 29.5
Duzib268G0600 Durio zibethinus HOM05D003177 ORTHO05D003481 5.0e-11 73.9 511 31.1
Cfa020414 Carpinus fangiana HOM05D003177 ORTHO05D003481 6.5e-11 73.6 525 29.1
Pp3c2_1560 Physcomitrium patens HOM05D015612 ORTHO05D050301 8.5e-11 73.2 423 23.6
AagrBONN_evm.TU.Sc2ySwM_369.263 Anthoceros agrestis HOM05D015612 ORTHO05D003481 1.1e-10 72.8 97 43.3
unitig_749.g13972 Utricularia gibba HOM05D003177 ORTHO05D003481 1.9e-10 72.0 312 24.0
TPR.G25924 Trifolium pratense HOM05D003177 ORTHO05D003481 4.2e-10 70.9 573 21.3
Mapoly0011s0128 Marchantia polymorpha HOM05D015612 ORTHO05D003481 9.4e-10 69.7 122 34.4
Carub.0006s3271 Capsella rubella HOM05D003177 ORTHO05D003481 1.2e-09 69.3 543 23.0
EL10Ac4g07970 Beta vulgaris HOM05D003177 ORTHO05D003481 6.1e-09 67.0 244 23.4
Aa31LG9G9680 Aethionema arabicum HOM05D003177 ORTHO05D003481 1.0e-08 66.2 546 22.2
Phvul.003G295700 Phaseolus vulgaris HOM05D003177 ORTHO05D003481 3.0e-08 64.7 361 19.9
Haze_15114 Corylus avellana HOM05D000891 ORTHO05D000761 1.2e-07 62.8 390 18.7
HanXRQChr05g0159201 Helianthus annuus HOM05D003177 ORTHO05D003481 1.2e-07 62.8 240 23.8
Gohir.A01G074600 Gossypium hirsutum HOM05D003177 ORTHO05D003481 3.4e-07 61.2 515 24.5
Glyma.12G135500 Glycine max HOM05D003177 ORTHO05D003481 1.3e-06 59.3 254 25.6
Nitab4.5_0007167g0040 Nicotiana tabacum HOM05D006156 ORTHO05D007699 1.3e-06 59.3 124 30.6
MD04G1014300 Malus domestica HOM05D000162 ORTHO05D000090 2.2e-06 58.5 113 29.2
Thecc.07G052500 Theobroma cacao HOM05D003177 ORTHO05D003481 2.2e-06 58.5 121 30.6
PSO063G3185 Papaver somniferum HOM05D000001 ORTHO05D000003 2.8e-06 58.2 261 23.0
VMungo1127G0069 Vigna mungo HOM05D003177 ORTHO05D003481 3.7e-06 57.8 244 25.0
Cfa010144 Carpinus fangiana HOM05D004783 ORTHO05D005581 6.3e-06 57.0 132 31.1
CiPaw.01G035200 Carya illinoinensis HOM05D000891 ORTHO05D000761 8.3e-06 56.6 391 18.9


User provided reference genes

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