Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO167G0017 Selaginella moellendorffii HOM05D002427 ORTHO05D002818 3.8e-99 364.8 176 100.0
SMO347G0398 Selaginella moellendorffii HOM05D002427 ORTHO05D002818 2.1e-25 119.8 108 66.7
AagrBONN_evm.TU.Sc2ySwM_344.3392 Anthoceros agrestis HOM05D002427 ORTHO05D002818 1.0e-19 100.9 112 51.8
CDE02G4430 Ceratophyllum demersum HOM05D002427 ORTHO05D002818 3.0e-19 99.4 132 45.5
Potri.001G305300 Populus trichocarpa HOM05D002427 ORTHO05D002818 5.1e-19 98.6 112 51.8
Sabra16G0191600 Salix brachista HOM05D002427 ORTHO05D002818 6.6e-19 98.2 112 51.8
CAN.G676.46 Capsicum annuum HOM05D002427 ORTHO05D002818 1.9e-18 96.7 112 50.9
Solyc04g015450.3 Solanum lycopersicum HOM05D002427 ORTHO05D002818 1.9e-18 96.7 112 50.9
Sopen04g007500 Solanum pennellii HOM05D002427 ORTHO05D002818 1.9e-18 96.7 112 50.9
Nitab4.5_0000147g0070 Nicotiana tabacum HOM05D002427 ORTHO05D002818 2.5e-18 96.3 112 50.9
PGSC0003DMG400027268 Solanum tuberosum HOM05D002427 ORTHO05D002818 2.5e-18 96.3 112 50.0
TWI31G0626 Tripterygium wilfordii HOM05D002427 ORTHO05D002818 3.3e-18 95.9 115 50.4
Nitab4.5_0001663g0160 Nicotiana tabacum HOM05D002427 ORTHO05D002818 4.3e-18 95.5 112 50.9
PSO017G6250 Papaver somniferum HOM05D002427 ORTHO05D002818 5.6e-18 95.1 108 51.9
PSO170G1031 Papaver somniferum HOM05D002427 ORTHO05D002818 5.6e-18 95.1 108 51.9
COL.COLO4_07358 Corchorus olitorius HOM05D002427 ORTHO05D002818 7.3e-18 94.7 110 50.9
C02p03680 Brassica napus HOM05D002427 ORTHO05D002818 9.6e-18 94.4 109 52.3
BolC2t06327H Brassica oleracea HOM05D002427 ORTHO05D002818 9.6e-18 94.4 109 52.3
BraA02t04962Z Brassica rapa HOM05D002427 ORTHO05D002818 9.6e-18 94.4 109 52.3
CDE08G1546 Ceratophyllum demersum HOM05D002427 ORTHO05D002818 9.6e-18 94.4 108 51.9
AUR62039045 Chenopodium quinoa HOM05D002427 ORTHO05D002818 9.6e-18 94.4 108 52.8
Nn1g08924 Nelumbo nucifera HOM05D002427 ORTHO05D002818 9.6e-18 94.4 108 51.9
Zm00001eb207820 Zea mays HOM05D002427 ORTHO05D002818 9.6e-18 94.4 108 53.7
CANSAT54G0435 Cannabis sativa HOM05D002427 ORTHO05D002818 1.3e-17 94.0 108 51.9
CiPaw.03G254700 Carya illinoinensis HOM05D002427 ORTHO05D002818 1.3e-17 94.0 108 51.9
AUR62004792 Chenopodium quinoa HOM05D002427 ORTHO05D002818 1.3e-17 94.0 108 53.7
Phvul.009G157100 Phaseolus vulgaris HOM05D002427 ORTHO05D002818 1.3e-17 94.0 108 50.0
Pp3c26_13410 Physcomitrium patens HOM05D002427 ORTHO05D002818 1.3e-17 94.0 108 52.8
HPP92_024255 Vanilla planifolia HOM05D002427 ORTHO05D002818 1.3e-17 94.0 108 50.9
HPP92_024266 Vanilla planifolia HOM05D002427 ORTHO05D002818 1.3e-17 94.0 108 50.9
MELO3C003261.2 Cucumis melo HOM05D002427 ORTHO05D002818 1.6e-17 93.6 108 50.9
ATR0684G052 Amborella trichopoda HOM05D002427 ORTHO05D002818 2.1e-17 93.2 108 51.9
CsaV3_4G029800 Cucumis sativus L. HOM05D002427 ORTHO05D002818 2.1e-17 93.2 108 50.9
Mapoly0067s0096 Marchantia polymorpha HOM05D002427 ORTHO05D002818 2.1e-17 93.2 82 63.4
THA.LOC104818410 Tarenaya hassleriana HOM05D002427 ORTHO05D002818 2.1e-17 93.2 108 52.8
BcaC03g13236 Brassica carinata HOM05D002427 ORTHO05D002818 2.8e-17 92.8 108 51.9
DCAR_012727 Daucus carota HOM05D002427 ORTHO05D002818 2.8e-17 92.8 112 50.0
Oeu011019.1 Olea europaea HOM05D002427 ORTHO05D002818 2.8e-17 92.8 112 49.1
Sp6g34210 Schrenkiella parvula HOM05D002427 ORTHO05D002818 2.8e-17 92.8 108 51.9
Aa31LG3G17890 Aethionema arabicum HOM05D002427 ORTHO05D002818 3.6e-17 92.4 108 50.9
Cfa002224 Carpinus fangiana HOM05D002427 ORTHO05D002818 3.6e-17 92.4 108 51.9
Thhalv10012870m.g Eutrema salsugineum HOM05D002427 ORTHO05D002818 3.6e-17 92.4 108 51.9
Glyma.06G159400 Glycine max HOM05D002427 ORTHO05D002818 3.6e-17 92.4 108 50.0
Gohir.D04G040100 Gossypium hirsutum HOM05D002427 ORTHO05D002818 3.6e-17 92.4 108 50.9
Gorai.012G045200 Gossypium raimondii HOM05D002427 ORTHO05D002818 3.6e-17 92.4 108 50.9
MD02G1127200 Malus domestica HOM05D002427 ORTHO05D002818 3.6e-17 92.4 108 50.9
Manes.13G078601 Manihot esculenta HOM05D002427 ORTHO05D002818 3.6e-17 92.4 108 50.0
Prupe.7G172400 Prunus persica HOM05D002427 ORTHO05D002818 3.6e-17 92.4 108 51.9
QL10p040373 Quercus lobata HOM05D002427 ORTHO05D002818 3.6e-17 92.4 109 49.5
VMungo1309G0797 Vigna mungo HOM05D002427 ORTHO05D002818 3.6e-17 92.4 108 50.0
Ah.06g191700 Amaranthus hybridus HOM05D002427 ORTHO05D002818 4.8e-17 92.0 108 50.9
Glyma.04G206300 Glycine max HOM05D002427 ORTHO05D002818 4.8e-17 92.0 108 49.1
QL10p040252 Quercus lobata HOM05D002427 ORTHO05D002818 4.8e-17 92.0 108 50.0
Sc09g0004380 Simmondsia chinensis HOM05D002427 ORTHO05D002818 4.8e-17 92.0 108 52.8
Thecc.01G238700 Theobroma cacao HOM05D002427 ORTHO05D002818 4.8e-17 92.0 108 50.9
Duzib147G0870 Durio zibethinus HOM05D002427 ORTHO05D002818 6.2e-17 91.7 108 49.1
Atru.chr4.1181 Acer truncatum HOM05D002427 ORTHO05D002818 8.1e-17 91.3 108 51.9
AL6G19380 Arabidopsis lyrata HOM05D002427 ORTHO05D002818 8.1e-17 91.3 108 50.0
AT5G08650 Arabidopsis thaliana HOM05D002427 ORTHO05D002818 8.1e-17 91.3 108 50.0
Carub.0006s0764 Capsella rubella HOM05D002427 ORTHO05D002818 8.1e-17 91.3 108 50.0
Migut.L00555 Erythranthe guttata HOM05D002427 ORTHO05D002818 8.1e-17 91.3 108 50.9
vmacro18681 Vaccinium macrocarpon HOM05D002427 ORTHO05D002818 8.1e-17 91.3 122 46.7
MSTRG.15260 Avicennia marina HOM05D002427 ORTHO05D002818 1.1e-16 90.9 108 50.0
CARHR204330 Cardamine hirsuta HOM05D002427 ORTHO05D002818 1.1e-16 90.9 108 50.0
Dinv05907 Davidia involucrata HOM05D002427 ORTHO05D002818 1.1e-16 90.9 108 50.9
HanXRQChr11g0343541 Helianthus annuus HOM05D002427 ORTHO05D002818 1.1e-16 90.9 108 51.9
CBR_g41196 Chara braunii HOM05D002427 ORTHO05D002818 1.4e-16 90.5 108 52.8
Ciclev10025061m.g Citrus clementina HOM05D002427 ORTHO05D002818 1.4e-16 90.5 108 51.9
arahy.Tifrunner.gnm1.ann1.A2RU10 Arachis hypogaea HOM05D002427 ORTHO05D002818 1.8e-16 90.1 108 48.1
arahy.Tifrunner.gnm1.ann1.GNX9M7 Arachis hypogaea HOM05D002427 ORTHO05D002818 1.8e-16 90.1 108 48.1
Cpa.g.sc37.74 Carica papaya HOM05D002427 ORTHO05D002818 1.8e-16 90.1 108 50.0
Ca_17016_v3 Cicer arietinum L. HOM05D002427 ORTHO05D002818 1.8e-16 90.1 108 48.1
Eucgr.L00739 Eucalyptus grandis HOM05D002427 ORTHO05D002818 1.8e-16 90.1 84 57.1
Gohir.A05G375700 Gossypium hirsutum HOM05D002427 ORTHO05D002818 1.8e-16 90.1 85 57.6
GSVIVG01022409001 Vitis vinifera HOM05D002427 ORTHO05D002818 1.8e-16 90.1 108 50.0
ECA248G0559 Erigeron canadensis HOM05D002427 ORTHO05D002818 2.4e-16 89.7 108 50.0
Lj1g0013321 Lotus japonicus HOM05D002427 ORTHO05D002818 2.4e-16 89.7 108 48.1
RcHm_v2.0_Chr2g0098891 Rosa chinensis HOM05D002427 ORTHO05D002818 2.4e-16 89.7 108 50.0
FvH4_1g11350 Fragaria vesca HOM05D002427 ORTHO05D002818 3.1e-16 89.4 108 49.1
FAN28G1337 Fragaria x ananassa HOM05D002427 ORTHO05D002818 3.1e-16 89.4 108 49.1
Lsat_1_v5_gn_1_80721 Lactuca sativa HOM05D002427 ORTHO05D002818 3.1e-16 89.4 108 50.9
Lj4A817T44 Lonicera japonica HOM05D002427 ORTHO05D002818 3.1e-16 89.4 108 50.9
Sed0011884 Sechium edule HOM05D002427 ORTHO05D002818 3.1e-16 89.4 108 50.9
Actinidia16534 Actinidia chinensis HOM05D002427 ORTHO05D002818 4.0e-16 89.0 108 48.1
CSS0047928 Camellia sinensis var. sinensis HOM05D002427 ORTHO05D002818 5.3e-16 88.6 108 49.1
PGR102G2135 Punica granatum HOM05D002427 ORTHO05D002818 6.9e-16 88.2 108 49.1
Rhsim08G0000900 Rhododendron simsii HOM05D002427 ORTHO05D002818 9.0e-16 87.8 85 55.3
SalBow5G1238 Salvia bowleyana HOM05D002427 ORTHO05D002818 1.2e-15 87.4 108 50.9
unitig_37.g12358 Utricularia gibba HOM05D002427 ORTHO05D002818 1.2e-15 87.4 112 47.3
Aqoxy5G02414 Aquilegia oxysepala HOM05D002427 ORTHO05D002818 1.5e-15 87.0 108 49.1
Cc07_g20240 Coffea canephora HOM05D002427 ORTHO05D002818 1.5e-15 87.0 108 49.1
MBI03_g40054_MAGBIO Magnolia biondii HOM05D002427 ORTHO05D002818 1.5e-15 87.0 108 50.0
Medtr3g097250 Medicago truncatula HOM05D002427 ORTHO05D002818 1.5e-15 87.0 108 49.1
Lalb_Chr08g0237811 Lupinus albus HOM05D002427 ORTHO05D002818 3.4e-15 85.9 108 49.1
Psat5g057760 Pisum sativum HOM05D002427 ORTHO05D002818 3.4e-15 85.9 108 45.4
TPR.G28700 Trifolium pratense HOM05D002427 ORTHO05D002818 7.6e-15 84.7 108 46.3
MBI03_g11148_MAGBIO Magnolia biondii HOM05D002427 ORTHO05D002818 1.3e-14 84.0 77 61.0
PRCOL_00004188 Prasinoderma coloniale HOM05D002427 ORTHO05D002818 2.9e-14 82.8 94 51.1
Haze_25401 Corylus avellana HOM05D002427 ORTHO05D002818 6.4e-14 81.6 109 46.8
EL10Ac4g08949 Beta vulgaris HOM05D002427 ORTHO05D002818 2.7e-12 76.3 153 37.3
Cre03.g165000 Chlamydomonas reinhardtii HOM05D002427 ORTHO05D002818 6.0e-12 75.1 77 50.6
Hund06883 Selenicereus undatus HOM05D002427 ORTHO05D002818 3.9e-11 72.4 137 36.5
GSVIVG01013290001 Vitis vinifera HOM05D000846 ORTHO05D013774 1.6e-09 67.0 56 57.1
MCO14G556 Micromonas commoda HOM05D002427 ORTHO05D002818 2.1e-09 66.6 81 44.4
FAN23G1666 Fragaria x ananassa HOM05D002427 ORTHO05D002818 8.1e-09 64.7 56 53.6
SGA_v2.0_scaffold30G12357 Striga asiatica HOM05D002427 ORTHO05D002818 4.0e-08 62.4 79 49.4
TAR381G0395 Trochodendron aralioides HOM05D002427 ORTHO05D002818 6.9e-08 61.6 78 48.7
Haze_26552 Corylus avellana HOM05D002427 ORTHO05D002818 9.0e-08 61.2 82 42.7
GSVIVG01034283001 Vitis vinifera HOM05D000846 ORTHO05D000183 1.2e-07 60.8 56 57.1
Glyma.04G168701 Glycine max HOM05D002427 ORTHO05D002818 1.5e-07 60.5 50 64.0
Lsat_1_v5_gn_7_52080 Lactuca sativa HOM05D001785 ORTHO05D001150 2.6e-07 59.7 56 51.8
Glyma.04G168800 Glycine max HOM05D002427 ORTHO05D002818 4.5e-07 58.9 50 62.0
EL10Ac2g02947 Beta vulgaris HOM05D002427 ORTHO05D002818 1.7e-06 57.0 76 34.2


User provided reference genes

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