Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO147G0118 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 3.3e-107 391.7 198 100.0
SMO147G0151 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 6.5e-47 191.4 253 51.8
SMO273G0012 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 1.4e-36 157.1 217 48.8
PSO210G1653 Papaver somniferum HOM05D005156 ORTHO05D006710 5.0e-31 138.7 247 40.1
CDE12G0606 Ceratophyllum demersum HOM05D005156 ORTHO05D006710 8.5e-31 137.9 246 41.1
Aqoxy8s002 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 1.1e-30 137.5 245 40.8
PSO210G0499 Papaver somniferum HOM05D005156 ORTHO05D006710 1.9e-30 136.7 247 39.7
CsaV3_1G043140 Cucumis sativus L. HOM05D005156 ORTHO05D006710 2.5e-30 136.3 246 39.8
TPR.G34160 Trifolium pratense HOM05D005156 ORTHO05D006710 2.5e-30 136.3 246 40.7
Lj3g0017854 Lotus japonicus HOM05D005156 ORTHO05D006710 9.4e-30 134.4 246 40.2
Psat7g227760 Pisum sativum HOM05D005156 ORTHO05D006710 2.1e-29 133.3 245 39.6
CANSAT54G2883 Cannabis sativa HOM05D005156 ORTHO05D006710 3.6e-29 132.5 247 39.3
Cfa009832 Carpinus fangiana HOM05D005156 ORTHO05D006710 4.7e-29 132.1 246 38.6
Prupe.4G258300 Prunus persica HOM05D005156 ORTHO05D006710 6.1e-29 131.7 243 38.7
Potri.001G254000 Populus trichocarpa HOM05D005156 ORTHO05D006710 1.0e-28 131.0 246 39.0
PGR119G1881 Punica granatum HOM05D005156 ORTHO05D006710 1.0e-28 131.0 247 38.9
TAR626G1548 Trochodendron aralioides HOM05D005156 ORTHO05D006710 1.8e-28 130.2 246 38.2
Manes.15G112800 Manihot esculenta HOM05D005156 ORTHO05D006710 2.3e-28 129.8 246 38.2
Glyma.09G002700 Glycine max HOM05D005156 ORTHO05D006710 3.0e-28 129.4 246 38.6
Ciclev10015838m.g Citrus clementina HOM05D005156 ORTHO05D006710 1.1e-27 127.5 246 38.2
Lalb_Chr10g0094741 Lupinus albus HOM05D005156 ORTHO05D006710 1.1e-27 127.5 246 37.8
MD11G1196200 Malus domestica HOM05D005156 ORTHO05D006710 1.1e-27 127.5 246 38.2
ATR0751G133 Amborella trichopoda HOM05D005156 ORTHO05D006710 2.0e-27 126.7 246 37.4
VMungo1383G1089 Vigna mungo HOM05D005156 ORTHO05D006710 2.0e-27 126.7 253 38.7
CiPaw.13G153000 Carya illinoinensis HOM05D005156 ORTHO05D006710 2.6e-27 126.3 246 37.8
Phvul.011G080400 Phaseolus vulgaris HOM05D005156 ORTHO05D006710 3.3e-27 125.9 246 38.2
HPP92_001936 Vanilla planifolia HOM05D005156 ORTHO05D006710 4.4e-27 125.6 246 37.4
CSS0001612 Camellia sinensis var. sinensis HOM05D005156 ORTHO05D006710 5.7e-27 125.2 246 38.2
CSS0030488 Camellia sinensis var. sinensis HOM05D005156 ORTHO05D006710 5.7e-27 125.2 246 38.2
Carub.0001s3958 Capsella rubella HOM05D005156 ORTHO05D006710 5.7e-27 125.2 247 38.1
CARHR040540 Cardamine hirsuta HOM05D005156 ORTHO05D006710 9.7e-27 124.4 247 38.1
Eucgr.J00726 Eucalyptus grandis HOM05D005156 ORTHO05D006710 9.7e-27 124.4 246 37.4
Hma1.2p1_1115F.1_g258845 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 9.7e-27 124.4 246 38.6
Actinidia16358 Actinidia chinensis HOM05D005156 ORTHO05D006710 1.3e-26 124.0 246 38.6
Atru.chr3.2617 Acer truncatum HOM05D005156 ORTHO05D006710 1.7e-26 123.6 246 39.0
Thecc.09G243300 Theobroma cacao HOM05D005156 ORTHO05D006710 1.7e-26 123.6 246 37.4
Gorai.001G136000 Gossypium raimondii HOM05D005156 ORTHO05D006710 2.2e-26 123.2 246 37.4
BcaB02g11155 Brassica carinata HOM05D005156 ORTHO05D006710 2.8e-26 122.9 247 37.7
BcaC05g27410 Brassica carinata HOM05D005156 ORTHO05D006710 2.8e-26 122.9 247 37.7
Cpa.g.sc84.13 Carica papaya HOM05D005156 ORTHO05D006710 2.8e-26 122.9 246 37.8
Sc16g0011170 Simmondsia chinensis HOM05D005156 ORTHO05D006710 2.8e-26 122.9 246 37.8
BcaC08g43222 Brassica carinata HOM05D005156 ORTHO05D006710 4.8e-26 122.1 247 37.2
THA.LOC104804468 Tarenaya hassleriana HOM05D005156 ORTHO05D006710 4.8e-26 122.1 246 37.4
Migut.D00644 Erythranthe guttata HOM05D005156 ORTHO05D006710 8.2e-26 121.3 248 37.5
Thhalv10011639m.g Eutrema salsugineum HOM05D005156 ORTHO05D006710 8.2e-26 121.3 247 37.2
Dinv22149 Davidia involucrata HOM05D005156 ORTHO05D006710 1.1e-25 120.9 246 38.2
Gohir.D07G126000 Gossypium hirsutum HOM05D005156 ORTHO05D006710 1.4e-25 120.6 246 37.0
Mapoly0048s0046 Marchantia polymorpha HOM05D005156 ORTHO05D006710 1.4e-25 120.6 246 37.0
AL1G58170 Arabidopsis lyrata HOM05D005156 ORTHO05D006710 1.8e-25 120.2 247 37.2
BcaB07g33488 Brassica carinata HOM05D005156 ORTHO05D006710 1.8e-25 120.2 247 37.2
GSVIVG01037376001 Vitis vinifera HOM05D005156 ORTHO05D006710 1.8e-25 120.2 246 37.0
FvH4_3g28170 Fragaria vesca HOM05D005156 ORTHO05D006710 2.4e-25 119.8 247 36.0
Gohir.A07G121700 Gossypium hirsutum HOM05D005156 ORTHO05D006710 4.1e-25 119.0 246 36.6
RcHm_v2.0_Chr5g0050911 Rosa chinensis HOM05D005156 ORTHO05D006710 4.1e-25 119.0 247 36.4
EL10Ac4g10175 Beta vulgaris HOM05D005156 ORTHO05D006710 5.3e-25 118.6 246 37.0
MSTRG.18451 Avicennia marina HOM05D005156 ORTHO05D006710 7.0e-25 118.2 246 36.6
AT1G50510 Arabidopsis thaliana HOM05D005156 ORTHO05D006710 1.2e-24 117.5 247 36.8
MELO3C015153.2 Cucumis melo HOM05D005156 ORTHO05D006710 1.6e-24 117.1 183 42.6
AUR62000172 Chenopodium quinoa HOM05D005156 ORTHO05D006710 2.0e-24 116.7 245 35.9
Pp3c21_8650 Physcomitrium patens HOM05D005156 ORTHO05D006710 2.0e-24 116.7 245 36.3
A05p20090 Brassica napus HOM05D005156 ORTHO05D006710 2.7e-24 116.3 249 37.3
BraA05t20917Z Brassica rapa HOM05D005156 ORTHO05D006710 2.7e-24 116.3 249 37.3
ECA238G2265 Erigeron canadensis HOM05D005156 ORTHO05D006710 2.7e-24 116.3 246 35.4
BraA06t23519Z Brassica rapa HOM05D005156 ORTHO05D006710 3.5e-24 115.9 249 36.9
FAN16G2156 Fragaria x ananassa HOM05D005156 ORTHO05D006710 4.5e-24 115.5 247 35.2
C05p33580 Brassica napus HOM05D005156 ORTHO05D006710 7.7e-24 114.8 249 37.3
PGSC0003DMG400019760 Solanum tuberosum HOM05D005156 ORTHO05D006710 1.0e-23 114.4 246 35.8
Sopen11g015730 Solanum pennellii HOM05D005156 ORTHO05D006710 1.3e-23 114.0 246 36.2
Solyc11g033260.2 Solanum lycopersicum HOM05D005156 ORTHO05D006710 1.7e-23 113.6 246 36.2
Hund21990 Selenicereus undatus HOM05D005156 ORTHO05D006710 2.2e-23 113.2 207 40.1
Ah.06g194400 Amaranthus hybridus HOM05D005156 ORTHO05D006710 2.9e-23 112.8 245 35.9
Aqoxy4G00402 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 3.8e-23 112.5 204 41.7
CAN.G1323.2 Capsicum annuum HOM05D005156 ORTHO05D006710 3.8e-23 112.5 246 36.2
Nitab4.5_0006419g0030 Nicotiana tabacum HOM05D005156 ORTHO05D006710 5.0e-23 112.1 247 36.4
CBR_g12801 Chara braunii HOM05D005156 ORTHO05D006710 6.5e-23 111.7 245 35.5
Nitab4.5_0002113g0190 Nicotiana tabacum HOM05D005156 ORTHO05D006710 8.5e-23 111.3 246 36.2
unitig_90.g27461 Utricularia gibba HOM05D005156 ORTHO05D006710 1.1e-22 110.9 246 35.0
Cc01_g05890 Coffea canephora HOM05D005156 ORTHO05D006710 1.5e-22 110.5 206 37.4
Os08g0504400 Oryza sativa ssp. japonica HOM05D005156 ORTHO05D006710 1.5e-22 110.5 207 38.2
Zm00001eb251060 Zea mays HOM05D005156 ORTHO05D006710 3.2e-22 109.4 184 40.2
Sed0002302 Sechium edule HOM05D005156 ORTHO05D006710 4.2e-22 109.0 244 36.5
Sp1g37360 Schrenkiella parvula HOM05D005156 ORTHO05D006710 5.5e-22 108.6 247 36.4
Oeu001490.1 Olea europaea HOM05D005156 ORTHO05D006710 9.4e-22 107.8 246 35.8
A06p03060 Brassica napus HOM05D005156 ORTHO05D006710 2.1e-21 106.7 209 38.3
Haze_23195 Corylus avellana HOM05D005156 ORTHO05D006710 8.0e-21 104.8 253 34.8
QL01p017825 Quercus lobata HOM05D005156 ORTHO05D006710 8.0e-21 104.8 246 35.4
C06p05700 Brassica napus HOM05D005156 ORTHO05D006710 1.4e-20 104.0 207 36.7
Lj2C684T3 Lonicera japonica HOM05D005156 ORTHO05D006710 3.0e-20 102.8 234 35.0
Lj2C655T2 Lonicera japonica HOM05D005156 ORTHO05D006710 6.8e-20 101.7 221 36.7
BolC5t32085H Brassica oleracea HOM05D005156 ORTHO05D006710 1.2e-19 100.9 284 32.7
HanXRQChr06g0183211 Helianthus annuus HOM05D005156 ORTHO05D006710 1.2e-19 100.9 183 37.2
AUR62039839 Chenopodium quinoa HOM05D005156 ORTHO05D006710 1.5e-19 100.5 275 32.0
AagrBONN_evm.TU.Sc2ySwM_368.760 Anthoceros agrestis HOM05D005156 ORTHO05D006710 2.0e-19 100.1 245 33.1
SMO147G0023 Selaginella moellendorffii HOM05D005156 ORTHO05D376049 2.6e-19 99.8 107 55.1
Ca_12758_v3 Cicer arietinum L. HOM05D005156 ORTHO05D006710 5.7e-19 98.6 274 35.4
Aa31LG10G3780 Aethionema arabicum HOM05D005156 ORTHO05D006710 7.5e-19 98.2 207 37.2
arahy.Tifrunner.gnm1.ann1.9TL5ZW Arachis hypogaea HOM05D005156 ORTHO05D006710 9.8e-19 97.8 243 34.2
arahy.Tifrunner.gnm1.ann1.KCM926 Arachis hypogaea HOM05D005156 ORTHO05D006710 1.3e-18 97.4 243 33.7
Sabra16G0154700 Salix brachista HOM05D005156 ORTHO05D006710 1.3e-18 97.4 259 34.0
Hma1.2p1_2309F.1_g319520 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 3.7e-18 95.9 216 36.1
SHI21395 Sapria himalayana HOM05D005156 ORTHO05D006710 4.8e-18 95.5 204 36.8
Peaxi162Scf00473g00218 Petunia axillaris HOM05D005156 ORTHO05D006710 1.8e-17 93.6 275 32.0
PRCOL_00003626 Prasinoderma coloniale HOM05D005156 ORTHO05D006710 2.4e-17 93.2 248 31.9
DCAR_002091 Daucus carota HOM05D005156 ORTHO05D006710 1.2e-16 90.9 218 33.9
SMO147G0310 Selaginella moellendorffii HOM05D000066 ORTHO05D373802 1.2e-16 90.9 47 93.6
Rhsim13G0216600 Rhododendron simsii HOM05D005156 ORTHO05D006710 2.0e-16 90.1 185 37.3
FAN11G0102 Fragaria x ananassa HOM05D005156 ORTHO05D006710 5.9e-16 88.6 218 31.7
Lsat_1_v5_gn_2_29420 Lactuca sativa HOM05D005156 ORTHO05D006710 1.0e-15 87.8 230 31.7
MCO15G168 Micromonas commoda HOM05D005156 ORTHO05D006710 1.3e-15 87.4 238 29.0
FAN21G2369 Fragaria x ananassa HOM05D005156 ORTHO05D006710 3.8e-15 85.9 218 31.2
FAN25G0057 Fragaria x ananassa HOM05D005156 ORTHO05D006710 3.8e-15 85.9 218 31.2
Nn1g08054 Nelumbo nucifera HOM05D005156 ORTHO05D006710 5.0e-15 85.5 111 45.9
ClCG03G012920 Citrullus lanatus HOM05D005156 ORTHO05D006710 4.2e-14 82.4 270 31.9
Cre02.g144000 Chlamydomonas reinhardtii HOM05D005156 ORTHO05D006710 2.7e-13 79.7 205 30.7
SGA_v2.0_scaffold29G12276 Striga asiatica HOM05D005156 ORTHO05D006710 4.7e-13 79.0 159 39.0
Medtr4g031220 Medicago truncatula HOM05D005156 ORTHO05D006710 4.0e-12 75.9 78 59.0
MBI15_g27827_MAGBIO Magnolia biondii HOM05D005156 ORTHO05D006710 8.8e-12 74.7 79 55.7
BcaB02g11038 Brassica carinata HOM05D005156 ORTHO05D006710 2.6e-11 73.2 77 57.1
vmacro04002 Vaccinium macrocarpon HOM05D005156 ORTHO05D006710 4.4e-11 72.4 79 55.7
Medtr4g031235 Medicago truncatula HOM05D005156 ORTHO05D006710 7.5e-11 71.6 102 44.1
BcaB01g01392 Brassica carinata HOM05D005156 ORTHO05D006710 1.3e-10 70.9 77 55.8
Nn1g08053 Nelumbo nucifera HOM05D005156 ORTHO05D006710 5.0e-07 58.9 51 64.7
COL.COLO4_04116 Corchorus olitorius HOM05D005156 ORTHO05D006710 1.5e-06 57.4 53 58.5
Oeu016690.1 Olea europaea HOM05D005156 ORTHO05D006710 2.5e-06 56.6 145 31.7


User provided reference genes

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