Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO146G0364 Selaginella moellendorffii HOM05D000880 ORTHO05D004760 0.0e+00 1640.6 941 100.0
Mapoly0012s0035 Marchantia polymorpha HOM05D000880 ORTHO05D004760 1.9e-149 534.3 1056 40.1
SEGI_18392 Sequoiadendron giganteum HOM05D000880 ORTHO05D004760 3.7e-140 503.4 1040 40.3
Dinv33059 Davidia involucrata HOM05D000880 ORTHO05D004760 2.1e-135 487.6 941 38.0
Nn3g21505 Nelumbo nucifera HOM05D000880 ORTHO05D004760 7.9e-135 485.7 902 40.0
QL12p028379 Quercus lobata HOM05D000880 ORTHO05D004760 3.9e-134 483.4 903 39.9
Nitab4.5_0002995g0010 Nicotiana tabacum HOM05D000880 ORTHO05D004760 9.7e-133 478.8 901 39.1
ATR0100G058 Amborella trichopoda HOM05D000880 ORTHO05D004760 1.3e-132 478.4 898 38.1
Oeu000551.1 Olea europaea HOM05D000880 ORTHO05D004760 5.9e-130 469.5 924 37.2
CSS0046847 Camellia sinensis var. sinensis HOM05D000880 ORTHO05D004760 2.9e-129 467.2 914 39.1
MELO3C015997.2 Cucumis melo HOM05D000880 ORTHO05D004760 3.8e-129 466.8 865 38.8
CSS0022271 Camellia sinensis var. sinensis HOM05D000880 ORTHO05D004760 5.0e-129 466.5 909 38.3
CsaV3_7G029310 Cucumis sativus L. HOM05D000880 ORTHO05D004760 8.5e-129 465.7 862 38.9
Manes.01G219900 Manihot esculenta HOM05D000880 ORTHO05D004760 8.5e-129 465.7 928 35.8
Lj2A1196T50 Lonicera japonica HOM05D000880 ORTHO05D004760 1.4e-128 464.9 927 37.4
Cc01_g20920 Coffea canephora HOM05D000880 ORTHO05D004760 1.9e-128 464.5 913 36.8
Migut.C01322 Erythranthe guttata HOM05D000880 ORTHO05D004760 1.9e-128 464.5 947 37.1
Eucgr.K03490 Eucalyptus grandis HOM05D000880 ORTHO05D004760 1.9e-128 464.5 935 37.6
Lalb_Chr18g0046951 Lupinus albus HOM05D000880 ORTHO05D004760 1.2e-127 461.8 911 37.7
Pp3c9_17240 Physcomitrium patens HOM05D000880 ORTHO05D004760 1.2e-127 461.8 965 39.7
CAN.G125.1 Capsicum annuum HOM05D000880 ORTHO05D004760 7.9e-127 459.1 908 39.3
Hma1.2p1_0494F.1_g165220 Hydrangea macrophylla HOM05D000880 ORTHO05D004760 7.9e-127 459.1 924 38.1
AagrBONN_evm.TU.Sc2ySwM_117.3282 Anthoceros agrestis HOM05D000880 ORTHO05D004760 1.0e-126 458.8 926 40.3
ClCG09G005830 Citrullus lanatus HOM05D000880 ORTHO05D004760 1.8e-126 458.0 861 38.9
SGA_v2.0_scaffold24G10608 Striga asiatica HOM05D000880 ORTHO05D004760 1.8e-126 458.0 914 38.3
Hund25319 Selenicereus undatus HOM05D000880 ORTHO05D004760 3.0e-126 457.2 907 38.1
GSVIVG01028028001 Vitis vinifera HOM05D000880 ORTHO05D004760 5.1e-126 456.4 904 37.6
Sed0027832 Sechium edule HOM05D000880 ORTHO05D004760 3.3e-125 453.8 915 37.7
CiPaw.07G109900 Carya illinoinensis HOM05D000880 ORTHO05D004760 7.4e-125 452.6 900 38.0
Gorai.008G144800 Gossypium raimondii HOM05D000880 ORTHO05D004760 7.4e-125 452.6 904 39.7
Gohir.A12G130000 Gossypium hirsutum HOM05D000880 ORTHO05D004760 1.3e-124 451.8 903 38.6
CANSAT25G3354 Cannabis sativa HOM05D000880 ORTHO05D004760 2.2e-124 451.1 924 35.4
Ciclev10027776m.g Citrus clementina HOM05D000880 ORTHO05D004760 2.2e-124 451.1 901 38.3
Duzib138G0681 Durio zibethinus HOM05D000880 ORTHO05D004760 2.2e-124 451.1 914 38.0
SalBow7G4572 Salvia bowleyana HOM05D000880 ORTHO05D004760 2.2e-124 451.1 928 37.3
Gohir.D12G133800 Gossypium hirsutum HOM05D000880 ORTHO05D004760 4.8e-124 449.9 904 39.9
Sopen09g001650 Solanum pennellii HOM05D000880 ORTHO05D004760 4.8e-124 449.9 900 37.3
Ah.07g202710 Amaranthus hybridus HOM05D000880 ORTHO05D004760 8.2e-124 449.1 931 36.9
unitig_747.g21560 Utricularia gibba HOM05D000880 ORTHO05D004760 1.1e-123 448.7 898 37.0
CARHR250590 Cardamine hirsuta HOM05D000880 ORTHO05D004760 1.8e-123 448.0 895 39.3
MD11G1308900 Malus domestica HOM05D000880 ORTHO05D004760 1.8e-123 448.0 915 39.5
Potri.014G128300 Populus trichocarpa HOM05D000880 ORTHO05D004760 4.1e-123 446.8 914 36.4
PGR044G0963 Punica granatum HOM05D000880 ORTHO05D004760 5.3e-123 446.4 905 37.0
Thecc.01G301500 Theobroma cacao HOM05D000880 ORTHO05D004760 6.9e-123 446.0 920 37.5
Solyc09g005760.3 Solanum lycopersicum HOM05D000880 ORTHO05D004760 2.6e-122 444.1 904 37.7
PGSC0003DMG400023908 Solanum tuberosum HOM05D000880 ORTHO05D004760 4.5e-122 443.4 913 37.8
Haze_04946 Corylus avellana HOM05D000880 ORTHO05D004760 7.7e-122 442.6 876 37.1
THA.LOC104801276 Tarenaya hassleriana HOM05D000880 ORTHO05D004760 7.7e-122 442.6 907 37.8
Cfa005904 Carpinus fangiana HOM05D000880 ORTHO05D004760 3.8e-121 440.3 874 37.5
vmacro15153 Vaccinium macrocarpon HOM05D000880 ORTHO05D004760 3.8e-121 440.3 877 38.5
EL10Ac9g22871 Beta vulgaris HOM05D000880 ORTHO05D004760 1.1e-120 438.7 866 39.8
AUR62026599 Chenopodium quinoa HOM05D000880 ORTHO05D004760 2.5e-120 437.6 873 36.7
FAN24G3174 Fragaria x ananassa HOM05D000880 ORTHO05D007053 3.2e-120 437.2 883 37.6
Os03g0343300 Oryza sativa ssp. japonica HOM05D000880 ORTHO05D004760 3.2e-120 437.2 898 37.4
SalBow5G3782 Salvia bowleyana HOM05D000880 ORTHO05D004760 3.2e-120 437.2 914 35.6
Sp6g02280 Schrenkiella parvula HOM05D000880 ORTHO05D004760 7.2e-120 436.0 915 38.4
Sed0021307 Sechium edule HOM05D000880 ORTHO05D004760 1.2e-119 435.3 899 36.8
Zm00001eb016440 Zea mays HOM05D000880 ORTHO05D004760 1.6e-119 434.9 924 36.1
MD03G1289000 Malus domestica HOM05D000880 ORTHO05D004760 2.1e-119 434.5 908 38.3
PSO675G6830 Papaver somniferum HOM05D000880 ORTHO05D004760 6.1e-119 433.0 925 38.8
Aa31LG5G2040 Aethionema arabicum HOM05D000880 ORTHO05D004760 7.9e-119 432.6 892 35.8
Potri.002G203700 Populus trichocarpa HOM05D000880 ORTHO05D004760 7.9e-119 432.6 903 36.5
DCAR_015239 Daucus carota HOM05D000880 ORTHO05D004760 1.4e-118 431.8 869 38.4
FAN20G0148 Fragaria x ananassa HOM05D000880 ORTHO05D007053 1.4e-118 431.8 932 35.8
PSO541G5609 Papaver somniferum HOM05D000880 ORTHO05D004760 2.3e-118 431.0 916 37.0
FAN27G2693 Fragaria x ananassa HOM05D000880 ORTHO05D004760 3.0e-118 430.6 903 36.7
MSTRG.25483 Avicennia marina HOM05D000880 ORTHO05D004760 6.7e-118 429.5 761 39.8
Atru.chr3.2809 Acer truncatum HOM05D000880 ORTHO05D004760 4.4e-117 426.8 916 36.6
RcHm_v2.0_Chr6g0294141 Rosa chinensis HOM05D000880 ORTHO05D004760 7.4e-117 426.0 893 37.4
Aqoxy2G02932 Aquilegia oxysepala HOM05D000880 ORTHO05D004760 1.3e-116 425.2 903 36.3
Sabra02G0155400 Salix brachista HOM05D000880 ORTHO05D004760 1.3e-116 425.2 915 36.5
TAR362G0476 Trochodendron aralioides HOM05D000880 ORTHO05D004760 1.7e-116 424.9 912 36.6
AT4G02400 Arabidopsis thaliana HOM05D000880 ORTHO05D004760 2.8e-116 424.1 900 34.6
Rhsim01G0285600 Rhododendron simsii HOM05D000880 ORTHO05D004760 8.2e-116 422.5 857 37.2
Sc04g0008900 Simmondsia chinensis HOM05D000880 ORTHO05D004760 8.2e-116 422.5 897 36.7
FAN15G1023 Fragaria x ananassa HOM05D000880 ORTHO05D007053 5.3e-115 419.9 901 36.3
Peaxi162Scf00039g00620 Petunia axillaris HOM05D000880 ORTHO05D004760 7.0e-115 419.5 880 37.7
Lj1g0000333 Lotus japonicus HOM05D000880 ORTHO05D004760 1.5e-114 418.3 905 37.7
arahy.Tifrunner.gnm1.ann1.FAXC2W Arachis hypogaea HOM05D000880 ORTHO05D004760 2.0e-114 417.9 935 37.4
TWI14G0456 Tripterygium wilfordii HOM05D000880 ORTHO05D004760 3.5e-114 417.2 930 36.9
AL6G50720 Arabidopsis lyrata HOM05D000880 ORTHO05D004760 1.0e-113 415.6 901 35.0
AUR62005314 Chenopodium quinoa HOM05D000880 ORTHO05D004760 1.0e-113 415.6 862 35.3
Phvul.001G207700 Phaseolus vulgaris HOM05D000880 ORTHO05D004760 5.0e-113 413.3 858 38.1
Rhsim11G0035900 Rhododendron simsii HOM05D000880 ORTHO05D004760 6.5e-113 412.9 868 36.6
Carub.0006s3476 Capsella rubella HOM05D000880 ORTHO05D004760 1.5e-112 411.8 909 34.8
FvH4_2g25830 Fragaria vesca HOM05D000880 ORTHO05D004760 3.2e-112 410.6 878 36.7
Lsat_1_v5_gn_5_191521 Lactuca sativa HOM05D000880 ORTHO05D004760 4.7e-111 406.8 895 36.4
arahy.Tifrunner.gnm1.ann1.DCE7TU Arachis hypogaea HOM05D000880 ORTHO05D004760 6.1e-111 406.4 944 36.9
Thhalv10028424m.g Eutrema salsugineum HOM05D000880 ORTHO05D004760 8.0e-111 406.0 890 34.8
HPP92_011847 Vanilla planifolia HOM05D000880 ORTHO05D004760 6.7e-110 402.9 886 35.3
Glyma.03G214900 Glycine max HOM05D000880 ORTHO05D004760 2.0e-109 401.4 787 38.8
Glyma.19G211500 Glycine max HOM05D000880 ORTHO05D004760 3.3e-109 400.6 915 38.3
BcaC03g16120 Brassica carinata HOM05D000880 ORTHO05D004760 4.4e-109 400.2 895 36.5
Cpa.g.sc229.11 Carica papaya HOM05D000880 ORTHO05D004760 4.4e-109 400.2 922 36.0
Carub.0006s0757 Capsella rubella HOM05D000880 ORTHO05D004760 2.2e-108 397.9 905 35.4
COL.COLO4_23336 Corchorus olitorius HOM05D000880 ORTHO05D004760 1.8e-107 394.8 910 34.2
ECA248G0121 Erigeron canadensis HOM05D000880 ORTHO05D004760 2.4e-107 394.4 901 36.6
SMO146G0006 Selaginella moellendorffii HOM05D000880 ORTHO05D004760 2.4e-107 394.4 247 88.7
Psat3g021720 Pisum sativum HOM05D000880 ORTHO05D004760 7.0e-107 392.9 886 35.1
BolC2t09905H Brassica oleracea HOM05D000880 ORTHO05D004760 1.0e-105 389.0 908 35.9
HanXRQChr01g0001311 Helianthus annuus HOM05D000880 ORTHO05D004760 1.9e-104 384.8 886 37.5
A02p24660 Brassica napus HOM05D000880 ORTHO05D004760 2.5e-104 384.4 897 35.2
AL6G19330 Arabidopsis lyrata HOM05D000880 ORTHO05D004760 3.2e-104 384.0 919 32.9
C02p38920 Brassica napus HOM05D000880 ORTHO05D004760 3.2e-104 384.0 903 35.3
BcaB05g23626 Brassica carinata HOM05D000880 ORTHO05D004760 1.4e-102 378.6 895 33.1
Ca_09177_v3 Cicer arietinum L. HOM05D000880 ORTHO05D004760 2.3e-102 377.9 932 34.5
TPR.G9606 Trifolium pratense HOM05D000880 ORTHO05D004760 4.0e-102 377.1 927 34.6
CBR_g19437 Chara braunii HOM05D000880 ORTHO05D004760 2.0e-101 374.8 909 35.4
Medtr7g108730 Medicago truncatula HOM05D000880 ORTHO05D004760 6.3e-100 369.8 900 34.2
BraA02t07457Z Brassica rapa HOM05D000880 ORTHO05D004760 1.4e-99 368.6 903 35.5
Nitab4.5_0004207g0040 Nicotiana tabacum HOM05D000880 ORTHO05D004760 3.1e-99 367.5 795 36.1
PSO478G4138 Papaver somniferum HOM05D000880 ORTHO05D004760 4.1e-99 367.1 777 36.8
AT5G08600 Arabidopsis thaliana HOM05D000880 ORTHO05D004760 6.1e-95 353.2 893 32.9
Hma1.2p1_1471F.1_g285620 Hydrangea macrophylla HOM05D000880 ORTHO05D004760 6.8e-94 349.7 804 36.3
Thhalv10015339m.g Eutrema salsugineum HOM05D000880 ORTHO05D004760 8.3e-92 342.8 895 32.4
Oeu028138.2 Olea europaea HOM05D000880 ORTHO05D004760 1.2e-90 339.0 837 33.6
Medtr3g113240 Medicago truncatula HOM05D000880 ORTHO05D004760 8.6e-89 332.8 893 31.0
A09p01860 Brassica napus HOM05D000880 ORTHO05D004760 5.6e-88 330.1 893 31.8
BcaNung04048 Brassica carinata HOM05D000880 ORTHO05D004760 1.3e-84 318.9 900 31.7
MCO13G364 Micromonas commoda HOM05D000880 ORTHO05D004760 7.0e-83 313.2 751 36.8
Nitab4.5_0007049g0030 Nicotiana tabacum HOM05D000880 ORTHO05D004760 1.0e-81 309.3 621 37.5
Prupe.8G262300 Prunus persica HOM05D000880 ORTHO05D004760 7.3e-80 303.1 555 39.5
CDE05G0797 Ceratophyllum demersum HOM05D000880 ORTHO05D004760 6.8e-78 296.6 893 31.7
Atru.chr5.2474 Acer truncatum HOM05D000880 ORTHO05D004760 7.5e-77 293.1 574 38.9
Actinidia26752 Actinidia chinensis HOM05D000880 ORTHO05D004760 2.2e-76 291.6 584 37.5
MBI19_g43564_MAGBIO Magnolia biondii HOM05D000880 ORTHO05D004760 3.5e-74 284.3 342 50.6
Medtr7g091790 Medicago truncatula HOM05D000880 ORTHO05D004760 8.9e-70 269.6 842 31.2
VMungo1383G0181 Vigna mungo HOM05D000880 ORTHO05D004760 2.7e-66 258.1 429 39.4
PRCOL_00002788 Prasinoderma coloniale HOM05D000880 ORTHO05D004760 1.3e-65 255.8 896 29.8
BcaB01g02051 Brassica carinata HOM05D000880 ORTHO05D004760 1.9e-56 225.3 777 28.6
Medtr8g058740 Medicago truncatula HOM05D000880 ORTHO05D004760 7.6e-53 213.4 320 42.5
SEGI_12067 Sequoiadendron giganteum HOM05D000880 ORTHO05D004760 2.7e-50 204.9 487 36.8
PSO541G3373 Papaver somniferum HOM05D000880 ORTHO05D004760 1.5e-48 199.1 502 34.5
Cre11.g478950 Chlamydomonas reinhardtii HOM05D000880 ORTHO05D004760 1.9e-48 198.7 854 30.1
Cfa026849 Carpinus fangiana HOM05D000880 ORTHO05D004760 5.3e-46 190.7 706 28.6
SEGI_30897 Sequoiadendron giganteum HOM05D000880 ORTHO05D004760 7.9e-42 176.8 257 47.1
MSTRG.25474 Avicennia marina HOM05D000880 ORTHO05D004760 1.3e-41 176.0 232 44.0
TAR636G2791 Trochodendron aralioides HOM05D000880 ORTHO05D004760 5.1e-41 174.1 230 42.2
TAR633G1122 Trochodendron aralioides HOM05D000880 ORTHO05D004760 8.7e-41 173.3 210 44.3
VMungo1383G0715 Vigna mungo HOM05D000880 ORTHO05D004760 8.7e-41 173.3 165 52.1
PGR003G0015 Punica granatum HOM05D000880 ORTHO05D004760 2.5e-40 171.8 317 35.6
PSO782G1438 Papaver somniferum HOM05D000880 ORTHO05D004760 1.1e-38 166.4 705 27.7
Cre11.g478966 Chlamydomonas reinhardtii HOM05D000880 ORTHO05D004760 2.2e-36 158.7 815 29.1
C08p50820 Brassica napus HOM05D000880 ORTHO05D004760 1.3e-31 142.9 242 41.7
C02p30160 Brassica napus HOM05D000880 ORTHO05D004760 4.8e-31 141.0 247 40.1
BcaC07g42028 Brassica carinata HOM05D000880 ORTHO05D004760 6.2e-31 140.6 454 32.6
C09p01900 Brassica napus HOM05D000880 ORTHO05D004760 1.0e-28 133.3 180 43.9
BolC9t53125H Brassica oleracea HOM05D000880 ORTHO05D004760 1.0e-28 133.3 180 43.9
BolC8t52610H Brassica oleracea HOM05D000880 ORTHO05D004760 3.8e-28 131.3 242 40.1
Gohir.D12G134950 Gossypium hirsutum HOM05D000880 ORTHO05D004760 3.8e-28 131.3 184 50.5
A10p23840 Brassica napus HOM05D000880 ORTHO05D004760 1.1e-27 129.8 191 44.0
BolC4t25292H Brassica oleracea HOM05D000880 ORTHO05D004760 1.9e-27 129.0 454 31.1
BcaC08g44566 Brassica carinata HOM05D000880 ORTHO05D004760 7.1e-27 127.1 205 42.0
PSO210G4167 Papaver somniferum HOM05D000880 ORTHO05D004760 1.6e-26 125.9 180 41.7
BcaC02g09729 Brassica carinata HOM05D000880 ORTHO05D004760 7.9e-26 123.6 455 30.8
Gorai.008G145900 Gossypium raimondii HOM05D000880 ORTHO05D004760 1.3e-25 122.9 176 45.5
BcaC06g34728 Brassica carinata HOM05D000880 ORTHO05D004760 1.1e-24 119.8 421 29.9
BcaC03g15404 Brassica carinata HOM05D000880 ORTHO05D001048 3.3e-24 118.2 205 40.0
C07p40760 Brassica napus HOM05D000880 ORTHO05D004760 4.3e-24 117.9 170 44.7
Oeu000538.1 Olea europaea HOM05D000880 ORTHO05D004760 1.0e-20 106.7 211 34.1
TAR627G0201 Trochodendron aralioides HOM05D000880 ORTHO05D004760 7.2e-19 100.5 115 40.0
SEGI_39037 Sequoiadendron giganteum HOM05D000880 ORTHO05D004760 1.6e-18 99.4 128 57.0
CAN.G1465.7 Capsicum annuum HOM05D000880 ORTHO05D004760 4.6e-18 97.8 155 44.5
Gohir.A12G131050 Gossypium hirsutum HOM05D000880 ORTHO05D004760 4.3e-16 91.3 133 44.4
CAN.G1018.15 Capsicum annuum HOM05D000880 ORTHO05D004760 7.2e-11 73.9 104 38.5
MBI19_g43566_MAGBIO Magnolia biondii HOM05D000880 ORTHO05D244402 6.3e-07 60.8 77 51.9


User provided reference genes

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