Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO141G0006 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 1.5e-141 506.1 252 100.0
SMO186G0001 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 2.0e-125 452.6 252 92.5
Pp3c24_1560 Physcomitrium patens HOM05D006330 ORTHO05D008013 1.3e-89 333.6 253 66.4
CBR_g60689 Chara braunii HOM05D006330 ORTHO05D008013 3.7e-87 325.5 255 66.3
Os11g0247400 Oryza sativa ssp. japonica HOM05D006330 ORTHO05D008013 3.7e-87 325.5 253 66.0
Manes.12G055500 Manihot esculenta HOM05D006330 ORTHO05D008013 4.8e-87 325.1 253 64.4
Haze_03505 Corylus avellana HOM05D006330 ORTHO05D008013 1.4e-86 323.6 252 64.3
Zm00001eb168340 Zea mays HOM05D006330 ORTHO05D008013 1.4e-86 323.6 253 66.0
MELO3C021126.2 Cucumis melo HOM05D006330 ORTHO05D008013 2.4e-86 322.8 254 64.6
ECA247G1307 Erigeron canadensis HOM05D006330 ORTHO05D008013 3.1e-86 322.4 254 64.6
Lsat_1_v5_gn_9_16880 Lactuca sativa HOM05D006330 ORTHO05D008013 4.0e-86 322.0 254 64.2
Cfa010572 Carpinus fangiana HOM05D006330 ORTHO05D008013 5.3e-86 321.6 252 63.9
THA.LOC104804704 Tarenaya hassleriana HOM05D006330 ORTHO05D008013 6.9e-86 321.2 252 65.1
CsaV3_7G026730 Cucumis sativus L. HOM05D006330 ORTHO05D008013 9.0e-86 320.9 254 64.2
TAR362G0826 Trochodendron aralioides HOM05D006330 ORTHO05D008013 9.0e-86 320.9 252 64.7
CiPaw.13G055600 Carya illinoinensis HOM05D006330 ORTHO05D008013 2.6e-85 319.3 252 64.3
ClCG09G008360 Citrullus lanatus HOM05D006330 ORTHO05D008013 3.4e-85 318.9 254 63.0
Glyma.03G097100 Glycine max HOM05D006330 ORTHO05D008013 3.4e-85 318.9 252 62.3
Sopen09g015980 Solanum pennellii HOM05D006330 ORTHO05D008013 3.4e-85 318.9 253 63.2
Psat4g208240 Pisum sativum HOM05D006330 ORTHO05D008013 4.5e-85 318.5 254 62.6
MBI10_g35385_MAGBIO Magnolia biondii HOM05D006330 ORTHO05D008013 5.8e-85 318.2 253 63.6
Lj2C1112G6 Lonicera japonica HOM05D006330 ORTHO05D008013 7.6e-85 317.8 252 63.9
VMungo0331G1131 Vigna mungo HOM05D006330 ORTHO05D008013 1.0e-84 317.4 253 62.8
Phvul.010G036400 Phaseolus vulgaris HOM05D006330 ORTHO05D008013 1.3e-84 317.0 253 62.8
GSVIVG01001532001 Vitis vinifera HOM05D006330 ORTHO05D008013 1.3e-84 317.0 252 62.7
Sed0009827 Sechium edule HOM05D006330 ORTHO05D008013 1.7e-84 316.6 254 62.6
CDE02G1604 Ceratophyllum demersum HOM05D006330 ORTHO05D008013 2.9e-84 315.8 254 62.6
Mapoly0006s0124 Marchantia polymorpha HOM05D006330 ORTHO05D008013 2.9e-84 315.8 253 62.8
Cc01_g15880 Coffea canephora HOM05D006330 ORTHO05D008013 3.8e-84 315.5 253 62.5
Glyma.07G124200 Glycine max HOM05D006330 ORTHO05D008013 3.8e-84 315.5 252 62.7
PGR044G2230 Punica granatum HOM05D006330 ORTHO05D008013 4.9e-84 315.1 254 63.4
FAN15G1514 Fragaria x ananassa HOM05D006330 ORTHO05D008013 6.5e-84 314.7 252 63.5
Prupe.8G187200 Prunus persica HOM05D006330 ORTHO05D008013 6.5e-84 314.7 252 63.1
TPR.G17377 Trifolium pratense HOM05D006330 ORTHO05D008013 6.5e-84 314.7 253 62.1
Ciclev10015989m.g Citrus clementina HOM05D006330 ORTHO05D008013 8.4e-84 314.3 252 64.3
HanXRQChr07g0190561 Helianthus annuus HOM05D006330 ORTHO05D008013 8.4e-84 314.3 253 62.5
Aqoxy2G02383 Aquilegia oxysepala HOM05D006330 ORTHO05D008013 1.4e-83 313.5 253 62.1
RcHm_v2.0_Chr6g0282221 Rosa chinensis HOM05D006330 ORTHO05D008013 1.4e-83 313.5 252 63.5
Nn7g37444 Nelumbo nucifera HOM05D006330 ORTHO05D008013 2.5e-83 312.8 252 63.5
HPP92_007591 Vanilla planifolia HOM05D006330 ORTHO05D008013 3.2e-83 312.4 252 63.5
Atru.chr6.3528 Acer truncatum HOM05D006330 ORTHO05D008013 5.5e-83 311.6 252 62.3
CANSAT01G2136 Cannabis sativa HOM05D006330 ORTHO05D008013 5.5e-83 311.6 254 61.8
Duzib133G1456 Durio zibethinus HOM05D006330 ORTHO05D008013 5.5e-83 311.6 252 62.3
FvH4_2g17480 Fragaria vesca HOM05D006330 ORTHO05D008013 5.5e-83 311.6 252 62.7
PSO675G8704 Papaver somniferum HOM05D006330 ORTHO05D008013 5.5e-83 311.6 256 61.3
Migut.D00775 Erythranthe guttata HOM05D006330 ORTHO05D008013 7.1e-83 311.2 253 62.8
Gorai.007G161200 Gossypium raimondii HOM05D006330 ORTHO05D008013 9.3e-83 310.8 254 61.0
Actinidia23802 Actinidia chinensis HOM05D006330 ORTHO05D008013 1.2e-82 310.5 255 61.2
Carub.0003s2579 Capsella rubella HOM05D006330 ORTHO05D008013 1.2e-82 310.5 255 62.7
QL09p047707 Quercus lobata HOM05D006330 ORTHO05D008013 1.2e-82 310.5 252 62.7
Lalb_Chr12g0210221 Lupinus albus HOM05D006330 ORTHO05D008013 1.6e-82 310.1 252 61.5
Thecc.01G207700 Theobroma cacao HOM05D006330 ORTHO05D008013 1.6e-82 310.1 252 61.9
FAN24G2605 Fragaria x ananassa HOM05D006330 ORTHO05D008013 2.1e-82 309.7 252 62.3
Gohir.D11G150300 Gossypium hirsutum HOM05D006330 ORTHO05D008013 2.1e-82 309.7 254 61.0
TWI36G1481 Tripterygium wilfordii HOM05D006330 ORTHO05D008013 2.1e-82 309.7 252 62.3
DCAR_004774 Daucus carota HOM05D006330 ORTHO05D008013 2.7e-82 309.3 252 62.3
Potri.014G175500 Populus trichocarpa HOM05D006330 ORTHO05D008013 2.7e-82 309.3 253 62.1
AL3G41590 Arabidopsis lyrata HOM05D006330 ORTHO05D008013 3.5e-82 308.9 255 62.7
EL10Ac5g10587 Beta vulgaris HOM05D006330 ORTHO05D008013 3.5e-82 308.9 252 61.1
arahy.Tifrunner.gnm1.ann1.3RIK1P Arachis hypogaea HOM05D006330 ORTHO05D008013 4.6e-82 308.5 257 60.3
Sc05g0001630 Simmondsia chinensis HOM05D006330 ORTHO05D008013 4.6e-82 308.5 253 61.3
Actinidia34530 Actinidia chinensis HOM05D006330 ORTHO05D008013 6.0e-82 308.1 255 60.4
AT3G25470 Arabidopsis thaliana HOM05D006330 ORTHO05D008013 6.0e-82 308.1 255 62.4
Eucgr.K02361 Eucalyptus grandis HOM05D006330 ORTHO05D008013 6.0e-82 308.1 253 61.3
Medtr8g010130 Medicago truncatula HOM05D006330 ORTHO05D008013 6.0e-82 308.1 253 60.1
SalBow3G0290 Salvia bowleyana HOM05D006330 ORTHO05D008013 7.9e-82 307.8 253 62.1
Sp3g22990 Schrenkiella parvula HOM05D006330 ORTHO05D008013 7.9e-82 307.8 255 62.0
Gohir.A11G143900 Gossypium hirsutum HOM05D006330 ORTHO05D008013 1.0e-81 307.4 254 61.0
arahy.Tifrunner.gnm1.ann1.84ZR2Z Arachis hypogaea HOM05D006330 ORTHO05D008013 1.3e-81 307.0 257 59.9
BcaB08g34453 Brassica carinata HOM05D006330 ORTHO05D008013 1.3e-81 307.0 255 62.0
MSTRG.21296 Avicennia marina HOM05D006330 ORTHO05D008013 1.8e-81 306.6 253 62.1
C03p54570 Brassica napus HOM05D006330 ORTHO05D008013 1.8e-81 306.6 255 62.0
BolC3t17744H Brassica oleracea HOM05D006330 ORTHO05D008013 1.8e-81 306.6 255 62.0
BcaC06g35817 Brassica carinata HOM05D006330 ORTHO05D008013 2.3e-81 306.2 255 62.0
Hma1.2p1_0161F.1_g071650 Hydrangea macrophylla HOM05D006330 ORTHO05D008013 2.3e-81 306.2 251 61.8
Rhsim01G0247700 Rhododendron simsii HOM05D006330 ORTHO05D008013 2.3e-81 306.2 251 61.4
Aa31sc18G40 Aethionema arabicum HOM05D006330 ORTHO05D008013 3.0e-81 305.8 253 62.8
SGA_v2.0_scaffold231G43447 Striga asiatica HOM05D006330 ORTHO05D008013 3.0e-81 305.8 254 61.8
A07p06930 Brassica napus HOM05D006330 ORTHO05D008013 3.9e-81 305.4 255 62.0
BraA07t28484Z Brassica rapa HOM05D006330 ORTHO05D008013 3.9e-81 305.4 255 62.0
CARHR101770 Cardamine hirsuta HOM05D006330 ORTHO05D008013 5.1e-81 305.1 253 62.1
Thhalv10002617m.g Eutrema salsugineum HOM05D006330 ORTHO05D008013 5.1e-81 305.1 255 61.2
Ca_23158_v3 Cicer arietinum L. HOM05D006330 ORTHO05D008013 8.7e-81 304.3 253 60.9
A03p44190 Brassica napus HOM05D006330 ORTHO05D008013 1.5e-80 303.5 255 61.6
C07p10530 Brassica napus HOM05D006330 ORTHO05D008013 1.5e-80 303.5 256 62.1
BraA03t13548Z Brassica rapa HOM05D006330 ORTHO05D008013 1.5e-80 303.5 255 61.6
MD10G1148200 Malus domestica HOM05D006330 ORTHO05D008013 1.5e-80 303.5 253 60.5
vmacro14689 Vaccinium macrocarpon HOM05D006330 ORTHO05D008013 1.5e-80 303.5 267 58.1
ATR0743G141 Amborella trichopoda HOM05D006330 ORTHO05D008013 2.5e-80 302.8 253 60.9
BolC7t41520H Brassica oleracea HOM05D006330 ORTHO05D008013 5.7e-80 301.6 256 61.7
AUR62008069 Chenopodium quinoa HOM05D006330 ORTHO05D008013 6.3e-79 298.1 250 60.4
Hund09482 Selenicereus undatus HOM05D006330 ORTHO05D008013 8.5e-76 287.7 235 63.0
Ciclev10018050m.g Citrus clementina HOM05D006330 ORTHO05D008013 4.6e-74 282.0 239 62.3
BcaC01g03225 Brassica carinata HOM05D006330 ORTHO05D008013 2.2e-71 273.1 255 57.3
COL.COLO4_34269 Corchorus olitorius HOM05D006330 ORTHO05D008013 4.8e-71 271.9 212 64.2
AUR62028646 Chenopodium quinoa HOM05D006330 ORTHO05D008013 3.1e-70 269.2 213 63.8
Sabra14G0134300 Salix brachista HOM05D006330 ORTHO05D008013 3.1e-70 269.2 262 56.1
MCO07G099 Micromonas commoda HOM05D006330 ORTHO05D008013 7.2e-67 258.1 251 56.2
Lj3g0006219 Lotus japonicus HOM05D006330 ORTHO05D008013 5.1e-65 251.9 214 60.7
Oeu049580.1 Olea europaea HOM05D006330 ORTHO05D008013 1.1e-64 250.8 214 60.3
CSS0004044 Camellia sinensis var. sinensis HOM05D006330 ORTHO05D008013 9.7e-64 247.7 247 52.2
BcaB06g26747 Brassica carinata HOM05D006330 ORTHO05D008013 2.2e-63 246.5 258 52.7
PSO732G0743 Papaver somniferum HOM05D006330 ORTHO05D008013 1.4e-62 243.8 181 66.9
Peaxi162Scf00841g00112 Petunia axillaris HOM05D006330 ORTHO05D008013 7.0e-62 241.5 284 49.3
Solyc09g047870.4 Solanum lycopersicum HOM05D006330 ORTHO05D008013 1.0e-60 237.7 200 62.5
Nitab4.5_0000038g0340 Nicotiana tabacum HOM05D006330 ORTHO05D008013 8.5e-60 234.6 199 61.3
Nitab4.5_0010469g0010 Nicotiana tabacum HOM05D006330 ORTHO05D008013 8.5e-60 234.6 199 61.3
Dinv28793 Davidia involucrata HOM05D006330 ORTHO05D008013 4.2e-59 232.3 205 59.5
Cpa.g.sc8.41 Carica papaya HOM05D006330 ORTHO05D008013 5.5e-59 231.9 214 57.5
Cre10.g428900 Chlamydomonas reinhardtii HOM05D006330 ORTHO05D008013 1.2e-58 230.7 256 52.7
FAN27G2337 Fragaria x ananassa HOM05D006330 ORTHO05D008013 5.2e-57 225.3 210 56.7
HanXRQChr07g0198371 Helianthus annuus HOM05D006330 ORTHO05D008013 7.4e-56 221.5 176 64.2
PRCOL_00000451 Prasinoderma coloniale HOM05D006330 ORTHO05D008013 3.0e-49 199.5 299 42.5
CAN.G253.5 Capsicum annuum HOM05D006330 ORTHO05D008013 1.2e-37 161.0 130 63.8
AagrBONN_evm.TU.Sc2ySwM_368.2380 Anthoceros agrestis HOM05D006330 ORTHO05D008013 6.1e-34 148.7 127 58.3
SEGI_37995 Sequoiadendron giganteum HOM05D006330 ORTHO05D008013 6.1e-34 148.7 127 57.5
Hma1.2p1_0161F.1_g071660 Hydrangea macrophylla HOM05D006330 ORTHO05D008013 1.6e-26 124.0 82 68.3
arahy.Tifrunner.gnm1.ann1.VBTZ6V Arachis hypogaea HOM05D006330 ORTHO05D008013 1.4e-25 120.9 112 55.4
CDE04G0367 Ceratophyllum demersum HOM05D006330 ORTHO05D008013 6.0e-21 105.5 86 57.0
PSO675G8411 Papaver somniferum HOM05D006330 ORTHO05D008013 7.3e-19 98.6 106 47.2
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 4.7e-18 95.9 85 55.3
BcaB06g26875 Brassica carinata HOM05D006330 ORTHO05D008013 2.6e-08 63.5 64 54.7


User provided reference genes

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