Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO134G0149 Selaginella moellendorffii HOM05D005631 ORTHO05D006765 1.8e-96 355.9 180 100.0
FAN21G1424 Fragaria x ananassa HOM05D005631 ORTHO05D006765 1.6e-47 193.4 180 57.8
FAN11G1428 Fragaria x ananassa HOM05D005631 ORTHO05D006765 2.6e-47 192.6 179 57.5
FAN16G0042 Fragaria x ananassa HOM05D005631 ORTHO05D006765 2.6e-47 192.6 179 57.5
RcHm_v2.0_Chr5g0071621 Rosa chinensis HOM05D005631 ORTHO05D006765 4.5e-47 191.8 179 57.5
FvH4_3g39740 Fragaria vesca HOM05D005631 ORTHO05D006765 7.7e-47 191.0 179 57.0
GSVIVG01033331001 Vitis vinifera HOM05D005631 ORTHO05D006765 2.5e-45 186.0 177 56.5
Gohir.A03G025600 Gossypium hirsutum HOM05D005631 ORTHO05D006765 9.4e-45 184.1 181 56.9
Gohir.D03G142900 Gossypium hirsutum HOM05D005631 ORTHO05D006765 9.4e-45 184.1 181 56.9
Gorai.003G150100 Gossypium raimondii HOM05D005631 ORTHO05D006765 9.4e-45 184.1 181 56.9
Cfa011776 Carpinus fangiana HOM05D005631 ORTHO05D006765 1.6e-44 183.3 178 56.2
ClCG02G019260 Citrullus lanatus HOM05D005631 ORTHO05D006765 1.6e-44 183.3 178 55.6
FAN25G2299 Fragaria x ananassa HOM05D005631 ORTHO05D006765 1.6e-44 183.3 181 54.1
Ca_15010_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 2.1e-44 183.0 180 56.1
MD03G1056300 Malus domestica HOM05D005631 ORTHO05D006765 2.7e-44 182.6 178 56.2
Prupe.6G048500 Prunus persica HOM05D005631 ORTHO05D006765 2.7e-44 182.6 179 55.9
Pp3c4_18980 Physcomitrium patens HOM05D005631 ORTHO05D006765 3.6e-44 182.2 178 55.6
Mapoly0066s0110 Marchantia polymorpha HOM05D005631 ORTHO05D006765 1.0e-43 180.6 182 54.9
Glyma.18G057300 Glycine max HOM05D005631 ORTHO05D006765 1.4e-43 180.3 182 54.9
Medtr3g465690 Medicago truncatula HOM05D005631 ORTHO05D006765 1.4e-43 180.3 180 54.4
Sed0015217 Sechium edule HOM05D005631 ORTHO05D006765 1.4e-43 180.3 180 55.0
HPP92_019076 Vanilla planifolia HOM05D005631 ORTHO05D006765 1.4e-43 180.3 181 54.1
HanXRQChr10g0284941 Helianthus annuus HOM05D005631 ORTHO05D006765 2.3e-43 179.5 176 58.0
TAR633G1157 Trochodendron aralioides HOM05D005631 ORTHO05D006765 2.3e-43 179.5 182 53.8
CSS0000896 Camellia sinensis var. sinensis HOM05D005631 ORTHO05D006765 4.0e-43 178.7 178 55.6
MELO3C025697.2 Cucumis melo HOM05D005631 ORTHO05D006765 5.2e-43 178.3 178 55.6
Migut.H00695 Erythranthe guttata HOM05D005631 ORTHO05D006765 5.2e-43 178.3 180 52.8
Thhalv10014837m.g Eutrema salsugineum HOM05D005631 ORTHO05D006765 6.7e-43 177.9 178 56.2
Lalb_Chr15g0083281 Lupinus albus HOM05D005631 ORTHO05D006765 6.7e-43 177.9 180 55.6
CsaV3_6G015890 Cucumis sativus L. HOM05D005631 ORTHO05D006765 8.8e-43 177.6 178 55.1
Lsat_1_v5_gn_6_47101 Lactuca sativa HOM05D005631 ORTHO05D006765 8.8e-43 177.6 182 56.6
Nn1g05206 Nelumbo nucifera HOM05D005631 ORTHO05D006765 8.8e-43 177.6 180 55.0
Nitab4.5_0003548g0030 Nicotiana tabacum HOM05D005631 ORTHO05D006765 8.8e-43 177.6 180 56.1
Oeu059694.1 Olea europaea HOM05D005631 ORTHO05D006765 8.8e-43 177.6 183 55.7
Glyma.11G164100 Glycine max HOM05D005631 ORTHO05D006765 1.2e-42 177.2 182 53.8
CAN.G354.39 Capsicum annuum HOM05D005631 ORTHO05D006765 1.5e-42 176.8 180 54.4
arahy.Tifrunner.gnm1.ann1.7E53FC Arachis hypogaea HOM05D005631 ORTHO05D006765 2.0e-42 176.4 190 54.2
CANSAT54G1076 Cannabis sativa HOM05D005631 ORTHO05D006765 2.0e-42 176.4 178 53.9
SGA_v2.0_scaffold18G08260 Striga asiatica HOM05D005631 ORTHO05D006765 2.0e-42 176.4 180 52.8
Actinidia23857 Actinidia chinensis HOM05D005631 ORTHO05D006765 2.6e-42 176.0 179 55.9
Nitab4.5_0000438g0150 Nicotiana tabacum HOM05D005631 ORTHO05D006765 3.3e-42 175.6 183 55.7
Thecc.09G357600 Theobroma cacao HOM05D005631 ORTHO05D006765 3.3e-42 175.6 181 54.7
QL01p026260 Quercus lobata HOM05D005631 ORTHO05D006765 4.4e-42 175.3 177 54.8
Solyc03g033480.4 Solanum lycopersicum HOM05D005631 ORTHO05D006765 4.4e-42 175.3 180 55.0
PGSC0003DMG400022531 Solanum tuberosum HOM05D005631 ORTHO05D006765 4.4e-42 175.3 180 55.0
Cpa.g.sc2.358 Carica papaya HOM05D005631 ORTHO05D006765 5.7e-42 174.9 182 53.8
arahy.Tifrunner.gnm1.ann1.I7JS5F Arachis hypogaea HOM05D005631 ORTHO05D006765 7.5e-42 174.5 180 55.6
Ciclev10029319m.g Citrus clementina HOM05D005631 ORTHO05D006765 7.5e-42 174.5 171 56.1
Atru.chr3.4122 Acer truncatum HOM05D005631 ORTHO05D006765 1.3e-41 173.7 171 55.0
MSTRG.2645 Avicennia marina HOM05D005631 ORTHO05D006765 1.3e-41 173.7 180 53.3
DCAR_004046 Daucus carota HOM05D005631 ORTHO05D006765 2.2e-41 172.9 180 54.4
Potri.013G152600 Populus trichocarpa HOM05D005631 ORTHO05D006765 2.2e-41 172.9 178 53.9
THA.LOC104810692 Tarenaya hassleriana HOM05D005631 ORTHO05D006765 2.2e-41 172.9 180 53.9
Lj6g0005877 Lotus japonicus HOM05D005631 ORTHO05D006765 2.8e-41 172.6 171 56.1
MD11G1057500 Malus domestica HOM05D005631 ORTHO05D006765 2.8e-41 172.6 178 53.9
Sabra13G0122700 Salix brachista HOM05D005631 ORTHO05D006765 2.8e-41 172.6 178 53.9
SGA_v2.0_scaffold20G09058 Striga asiatica HOM05D005631 ORTHO05D006765 2.8e-41 172.6 180 53.3
Manes.02G211700 Manihot esculenta HOM05D005631 ORTHO05D006765 3.7e-41 172.2 171 56.1
ECA248G0403 Erigeron canadensis HOM05D005631 ORTHO05D006765 4.8e-41 171.8 171 55.6
A03p12230 Brassica napus HOM05D005631 ORTHO05D006765 6.3e-41 171.4 178 55.1
C03p14340 Brassica napus HOM05D005631 ORTHO05D006765 6.3e-41 171.4 178 55.1
BraA03t10534Z Brassica rapa HOM05D005631 ORTHO05D006765 6.3e-41 171.4 178 55.1
Carub.0007s3232 Capsella rubella HOM05D005631 ORTHO05D006765 6.3e-41 171.4 180 55.0
AL7G45820 Arabidopsis lyrata HOM05D005631 ORTHO05D006765 8.2e-41 171.0 178 54.5
Os03g0367800 Oryza sativa ssp. japonica HOM05D005631 ORTHO05D006765 8.2e-41 171.0 182 52.2
ATR0304G021 Amborella trichopoda HOM05D005631 ORTHO05D006765 1.1e-40 170.6 181 51.9
Rhsim01G0240900 Rhododendron simsii HOM05D005631 ORTHO05D006765 1.1e-40 170.6 180 53.3
C09p50330 Brassica napus HOM05D005631 ORTHO05D006765 1.4e-40 170.2 178 54.5
vmacro14621 Vaccinium macrocarpon HOM05D005631 ORTHO05D006765 1.4e-40 170.2 171 55.0
BraA10t43643Z Brassica rapa HOM05D005631 ORTHO05D006765 1.8e-40 169.9 178 54.5
Cc07_g10850 Coffea canephora HOM05D005631 ORTHO05D006765 1.8e-40 169.9 180 53.9
SalBow1G1570 Salvia bowleyana HOM05D005631 ORTHO05D006765 1.8e-40 169.9 180 51.7
Sopen03g006230 Solanum pennellii HOM05D005631 ORTHO05D006765 1.8e-40 169.9 180 53.9
AT5G37055 Arabidopsis thaliana HOM05D005631 ORTHO05D006765 2.4e-40 169.5 178 53.9
PGR102G0278 Punica granatum HOM05D005631 ORTHO05D006765 4.1e-40 168.7 181 53.6
Hund18954 Selenicereus undatus HOM05D000127 ORTHO05D006765 4.1e-40 168.7 180 52.2
VMungo1383G2760 Vigna mungo HOM05D005631 ORTHO05D006765 4.1e-40 168.7 157 58.6
A10p15820 Brassica napus HOM05D005631 ORTHO05D006765 5.3e-40 168.3 178 53.9
Aqoxy1G01288 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 7.0e-40 167.9 175 54.3
Hma1.2p1_1586F.1_g292190 Hydrangea macrophylla HOM05D005631 ORTHO05D006765 9.1e-40 167.5 180 52.8
BcaB08g36180 Brassica carinata HOM05D005631 ORTHO05D006765 1.2e-39 167.2 178 53.4
BcaC04g19866 Brassica carinata HOM05D005631 ORTHO05D006765 1.2e-39 167.2 178 53.4
BolC9t57889H Brassica oleracea HOM05D005631 ORTHO05D006765 1.2e-39 167.2 178 53.4
CARHR272280 Cardamine hirsuta HOM05D005631 ORTHO05D006765 1.2e-39 167.2 179 53.6
PSO349G0142 Papaver somniferum HOM05D005631 ORTHO05D006765 2.0e-39 166.4 173 53.2
unitig_899.g14680 Utricularia gibba HOM05D005631 ORTHO05D006765 2.0e-39 166.4 180 51.7
Aa31LG11G240 Aethionema arabicum HOM05D000127 ORTHO05D007184 2.7e-39 166.0 179 52.5
Eucgr.B04002 Eucalyptus grandis HOM05D005631 ORTHO05D006765 2.7e-39 166.0 184 51.6
BolC3t13878H Brassica oleracea HOM05D005631 ORTHO05D006765 7.7e-39 164.5 178 53.4
Zm00001eb195120 Zea mays HOM05D005631 ORTHO05D006765 1.7e-38 163.3 179 50.8
SEGI_31870 Sequoiadendron giganteum HOM05D005631 ORTHO05D006765 1.5e-37 160.2 175 51.4
COL.COLO4_11152 Corchorus olitorius HOM05D005631 ORTHO05D006765 4.0e-35 152.1 145 56.6
Phvul.006G073900 Phaseolus vulgaris HOM05D005631 ORTHO05D006765 2.6e-34 149.4 158 53.2
Ca_15008_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 3.4e-34 149.1 157 54.1
Peaxi162Scf00635g00621 Petunia axillaris HOM05D005631 ORTHO05D006765 2.4e-32 142.9 141 55.3
EL10Ac7g15917 Beta vulgaris HOM05D005631 ORTHO05D006765 2.5e-29 132.9 180 47.2
VMungo0540G1856 Vigna mungo HOM05D005631 ORTHO05D006765 2.3e-27 126.3 123 56.1
Oeu059678.1 Olea europaea HOM05D005631 ORTHO05D006765 1.2e-26 124.0 156 48.1
Atru.chr3.4121 Acer truncatum HOM05D005631 ORTHO05D006765 3.4e-26 122.5 103 61.2
TPR.G25706 Trifolium pratense HOM05D005631 ORTHO05D006765 4.9e-25 118.6 142 49.3
Sabra06G0125700 Salix brachista HOM05D005631 ORTHO05D006765 1.8e-24 116.7 160 48.1
AagrBONN_evm.TU.Sc2ySwM_117.69 Anthoceros agrestis HOM05D005631 ORTHO05D006765 4.1e-24 115.5 177 42.4
Psat5g026160 Pisum sativum HOM05D005631 ORTHO05D006765 9.2e-24 114.4 156 46.8
MCO05G013 Micromonas commoda HOM05D005631 ORTHO05D006765 1.9e-21 106.7 170 38.8
AUR62009671 Chenopodium quinoa HOM05D005631 ORTHO05D006765 9.5e-21 104.4 143 46.9
AUR62001872 Chenopodium quinoa HOM05D005631 ORTHO05D006765 1.6e-20 103.6 143 46.9
BcaB01g04521 Brassica carinata HOM05D005631 ORTHO05D006765 6.1e-20 101.7 158 41.8
CiPaw.13G069500 Carya illinoinensis HOM05D005631 ORTHO05D006765 3.9e-14 82.4 110 48.2
Sp6g20150 Schrenkiella parvula HOM05D000127 ORTHO05D007184 6.2e-12 75.1 102 48.0
Duzib150G1412 Durio zibethinus HOM05D005631 ORTHO05D006765 8.9e-11 71.2 120 40.0
Oeu008088.1 Olea europaea HOM05D005631 ORTHO05D006765 2.0e-10 70.1 62 59.7
Actinidia34479 Actinidia chinensis HOM05D005631 ORTHO05D006765 2.9e-09 66.2 116 42.2
CDE09G1253 Ceratophyllum demersum HOM05D001009 ORTHO05D000829 1.1e-08 64.3 109 37.6
Cre01.g044000 Chlamydomonas reinhardtii HOM05D005631 ORTHO05D006765 1.1e-08 64.3 148 36.5
Sc21g0005270 Simmondsia chinensis HOM05D005631 ORTHO05D006765 2.4e-08 63.2 111 40.5
CBR_g4734 Chara braunii HOM05D005631 ORTHO05D006765 3.2e-08 62.8 107 45.8


User provided reference genes

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