Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO119G0107 Selaginella moellendorffii HOM05D002705 ORTHO05D004955 0.0e+00 1295.4 677 100.0
SMO119G0278 Selaginella moellendorffii HOM05D002705 ORTHO05D004955 1.6e-169 600.5 429 79.0
AagrBONN_evm.TU.Sc2ySwM_362.2714 Anthoceros agrestis HOM05D002705 ORTHO05D004955 2.9e-115 420.2 849 35.0
SEGI_13522 Sequoiadendron giganteum HOM05D002705 ORTHO05D004955 8.8e-112 408.7 782 35.8
SMO115G0155 Selaginella moellendorffii HOM05D002705 ORTHO05D004955 4.9e-94 349.7 324 67.0
Lalb_Chr06g0169611 Lupinus albus HOM05D002705 ORTHO05D004955 6.9e-32 143.3 751 25.6
Atru.chr6.1980 Acer truncatum HOM05D002705 ORTHO05D004955 3.4e-31 141.0 753 25.0
Atru.chr6.2006 Acer truncatum HOM05D002705 ORTHO05D004955 4.5e-31 140.6 753 25.0
Os07g0492100 Oryza sativa ssp. japonica HOM05D002705 ORTHO05D004955 5.9e-31 140.2 752 25.0
Eucgr.K00116 Eucalyptus grandis HOM05D002705 ORTHO05D004955 1.0e-30 139.4 750 25.3
THA.LOC104825051 Tarenaya hassleriana HOM05D002705 ORTHO05D004955 1.0e-30 139.4 752 25.3
Glyma.20G198400 Glycine max HOM05D002705 ORTHO05D004955 2.9e-30 137.9 756 25.9
Phvul.L001885 Phaseolus vulgaris HOM05D002705 ORTHO05D004955 8.5e-30 136.3 751 24.1
MELO3C005443.2 Cucumis melo HOM05D002705 ORTHO05D004955 3.2e-29 134.4 749 25.5
Aa31LG7G10510 Aethionema arabicum HOM05D002705 ORTHO05D004955 4.2e-29 134.0 756 24.2
Potri.012G114100 Populus trichocarpa HOM05D002705 ORTHO05D004955 4.2e-29 134.0 749 24.6
CsaV3_5G005160 Cucumis sativus L. HOM05D002705 ORTHO05D004955 5.5e-29 133.7 747 24.8
Ciclev10033740m.g Citrus clementina HOM05D002705 ORTHO05D004955 1.2e-28 132.5 780 25.3
Medtr1g072800 Medicago truncatula HOM05D002705 ORTHO05D004955 1.2e-28 132.5 797 24.5
Psat6g140240 Pisum sativum HOM05D002705 ORTHO05D004955 2.1e-28 131.7 798 24.2
Sabra12G0083000 Salix brachista HOM05D002705 ORTHO05D004955 3.6e-28 131.0 614 25.2
TWI39G0103 Tripterygium wilfordii HOM05D002705 ORTHO05D004955 3.6e-28 131.0 752 25.4
Sp7g23120 Schrenkiella parvula HOM05D002705 ORTHO05D004955 7.9e-28 129.8 769 24.1
MD07G1244800 Malus domestica HOM05D002705 ORTHO05D004955 1.0e-27 129.4 758 23.0
HanXRQChr15g0493601 Helianthus annuus HOM05D002705 ORTHO05D004955 3.0e-27 127.9 749 24.3
Cpa.g.sc13.232 Carica papaya HOM05D002705 ORTHO05D004955 5.1e-27 127.1 750 24.1
Actinidia13623 Actinidia chinensis HOM05D002705 ORTHO05D004955 6.7e-27 126.7 788 24.6
Rhsim03G0158700 Rhododendron simsii HOM05D002705 ORTHO05D004955 6.7e-27 126.7 753 24.4
DCAR_014643 Daucus carota HOM05D002705 ORTHO05D004955 1.1e-26 125.9 748 23.5
TAR636G2282 Trochodendron aralioides HOM05D002705 ORTHO05D004955 1.1e-26 125.9 748 24.1
Cfa013602 Carpinus fangiana HOM05D002705 ORTHO05D004955 1.5e-26 125.6 745 23.1
AagrBONN_evm.TU.Sc2ySwM_117.709 Anthoceros agrestis HOM05D002705 ORTHO05D004955 2.0e-26 125.2 761 24.2
Solyc03g093850.2 Solanum lycopersicum HOM05D002705 ORTHO05D004955 2.0e-26 125.2 755 24.5
RcHm_v2.0_Chr1g0373301 Rosa chinensis HOM05D002705 ORTHO05D004955 2.5e-26 124.8 755 24.1
SalBow2G1886 Salvia bowleyana HOM05D002705 ORTHO05D004955 3.3e-26 124.4 767 24.0
Sopen03g024730 Solanum pennellii HOM05D002705 ORTHO05D004955 3.3e-26 124.4 747 24.5
FvH4_7g26710 Fragaria vesca HOM05D002705 ORTHO05D004955 4.3e-26 124.0 751 23.3
MCO05G634 Micromonas commoda HOM05D002705 ORTHO05D004955 4.3e-26 124.0 716 24.6
Lj5g0005183 Lotus japonicus HOM05D002705 ORTHO05D004955 5.7e-26 123.6 777 24.2
Prupe.2G270600 Prunus persica HOM05D002705 ORTHO05D004955 5.7e-26 123.6 755 23.2
FAN03G2179 Fragaria x ananassa HOM05D002705 ORTHO05D004955 7.4e-26 123.2 755 24.0
MD07G1243100 Malus domestica HOM05D002705 ORTHO05D004955 9.7e-26 122.9 757 24.3
arahy.Tifrunner.gnm1.ann1.WYM0Y2 Arachis hypogaea HOM05D002705 ORTHO05D004955 1.7e-25 122.1 555 25.4
BcaC06g32837 Brassica carinata HOM05D002705 ORTHO05D004955 1.7e-25 122.1 762 24.3
Sed0003657 Sechium edule HOM05D002705 ORTHO05D004955 1.7e-25 122.1 751 23.4
Nitab4.5_0010058g0010 Nicotiana tabacum HOM05D002705 ORTHO05D004955 2.2e-25 121.7 745 25.0
FAN06G0843 Fragaria x ananassa HOM05D002705 ORTHO05D004955 2.8e-25 121.3 753 24.0
Gorai.006G273800 Gossypium raimondii HOM05D002705 ORTHO05D004955 2.8e-25 121.3 749 24.2
Nn1g00769 Nelumbo nucifera HOM05D002705 ORTHO05D004955 2.8e-25 121.3 755 24.2
TPR.G18561 Trifolium pratense HOM05D002705 ORTHO05D004955 2.8e-25 121.3 772 24.7
AL7G28030 Arabidopsis lyrata HOM05D002705 ORTHO05D004955 3.7e-25 120.9 762 23.1
SMO263G0015 Selaginella moellendorffii HOM05D002705 ORTHO05D004955 3.7e-25 120.9 742 24.7
arahy.Tifrunner.gnm1.ann1.ZG0SUW Arachis hypogaea HOM05D002705 ORTHO05D004955 4.8e-25 120.6 555 25.4
ClCG01G004930 Citrullus lanatus HOM05D002705 ORTHO05D004955 4.8e-25 120.6 751 25.2
AT4G25120 Arabidopsis thaliana HOM05D002705 ORTHO05D004955 6.3e-25 120.2 761 23.3
ECA232G4016 Erigeron canadensis HOM05D002705 ORTHO05D004955 8.2e-25 119.8 766 24.0
Oeu044165.1 Olea europaea HOM05D002705 ORTHO05D004955 8.2e-25 119.8 711 23.6
Hma1.2p1_2119F.1_g314370 Hydrangea macrophylla HOM05D002705 ORTHO05D004955 1.1e-24 119.4 748 23.9
Pp3c1_29170 Physcomitrium patens HOM05D002705 ORTHO05D004955 1.1e-24 119.4 762 24.4
ATR0665G329 Amborella trichopoda HOM05D002705 ORTHO05D004955 1.8e-24 118.6 755 23.8
CiPaw.07G183200 Carya illinoinensis HOM05D002705 ORTHO05D004955 1.8e-24 118.6 748 22.6
Gohir.D09G249500 Gossypium hirsutum HOM05D002705 ORTHO05D004955 1.8e-24 118.6 748 23.8
Aqoxy7G00864 Aquilegia oxysepala HOM05D002705 ORTHO05D004955 2.4e-24 118.2 749 24.6
Carub.0007s1591 Capsella rubella HOM05D002705 ORTHO05D004955 2.4e-24 118.2 757 23.4
Dinv34540 Davidia involucrata HOM05D002705 ORTHO05D004955 2.4e-24 118.2 752 24.3
PSO675G1384 Papaver somniferum HOM05D002705 ORTHO05D004955 3.1e-24 117.9 753 24.3
GSVIVG01013853001 Vitis vinifera HOM05D002705 ORTHO05D004955 3.1e-24 117.9 754 23.5
MSTRG.8400 Avicennia marina HOM05D002705 ORTHO05D004955 5.3e-24 117.1 572 24.5
Thhalv10024258m.g Eutrema salsugineum HOM05D002705 ORTHO05D004955 6.9e-24 116.7 763 23.3
FAN01G0508 Fragaria x ananassa HOM05D002705 ORTHO05D004955 9.1e-24 116.3 750 24.3
Thecc.03G145700 Theobroma cacao HOM05D002705 ORTHO05D004955 1.2e-23 115.9 757 24.4
SMO118G0423 Selaginella moellendorffii HOM05D002705 ORTHO05D004955 1.5e-23 115.5 738 24.7
Migut.F01210 Erythranthe guttata HOM05D002705 ORTHO05D004955 2.0e-23 115.2 754 23.3
Lsat_1_v5_gn_0_9880 Lactuca sativa HOM05D002705 ORTHO05D004955 2.6e-23 114.8 762 24.7
QL09p027408 Quercus lobata HOM05D002705 ORTHO05D004955 2.6e-23 114.8 744 22.6
Haze_22224 Corylus avellana HOM05D002705 ORTHO05D004955 3.4e-23 114.4 756 23.4
Cc00_g24340 Coffea canephora HOM05D002705 ORTHO05D004955 4.5e-23 114.0 761 24.0
Nitab4.5_0000103g0340 Nicotiana tabacum HOM05D002705 ORTHO05D004955 5.9e-23 113.6 576 25.5
Ah.02g115400 Amaranthus hybridus HOM05D002705 ORTHO05D004955 1.7e-22 112.1 728 25.4
COL.COLO4_37311 Corchorus olitorius HOM05D002705 ORTHO05D004955 1.7e-22 112.1 702 24.1
HPP92_003517 Vanilla planifolia HOM05D002705 ORTHO05D004955 2.2e-22 111.7 754 23.2
Ca_09785_v3 Cicer arietinum L. HOM05D002705 ORTHO05D004955 2.9e-22 111.3 373 29.2
Gohir.A09G248500 Gossypium hirsutum HOM05D002705 ORTHO05D004955 3.8e-22 110.9 771 23.6
PGR142G4199 Punica granatum HOM05D002705 ORTHO05D004955 8.5e-22 109.8 766 23.5
SGA_v2.0_scaffold352G49687 Striga asiatica HOM05D002705 ORTHO05D004955 1.1e-21 109.4 762 23.0
Pp3s32_280 Physcomitrium patens HOM05D020685 ORTHO05D022318 1.9e-21 108.6 711 23.8
EL10As1g23078 Beta vulgaris HOM05D002705 ORTHO05D004955 3.2e-21 107.8 774 23.9
CANSAT56G1220 Cannabis sativa HOM05D002705 ORTHO05D004955 9.4e-21 106.3 685 24.4
Manes.14G040900 Manihot esculenta HOM05D002705 ORTHO05D004955 9.4e-21 106.3 567 24.5
vmacro06848 Vaccinium macrocarpon HOM05D002705 ORTHO05D004955 1.2e-20 105.9 575 25.9
FAN10G0038 Fragaria x ananassa HOM05D002705 ORTHO05D004955 1.4e-19 102.4 762 23.0
Lj8C49G2 Lonicera japonica HOM05D002705 ORTHO05D004955 1.8e-19 102.1 564 23.4
Peaxi162Scf00073g01729 Petunia axillaris HOM05D002705 ORTHO05D004955 3.9e-19 100.9 566 24.0
MD07G1244300 Malus domestica HOM05D002705 ORTHO05D004955 5.1e-19 100.5 754 23.2
MD07G1243600 Malus domestica HOM05D002705 ORTHO05D004955 6.7e-19 100.1 342 27.2
Mapoly0067s0049 Marchantia polymorpha HOM05D002705 ORTHO05D004955 6.7e-19 100.1 752 23.3
MD07G1245700 Malus domestica HOM05D002705 ORTHO05D004955 1.5e-18 99.0 634 23.0
Cfa026800 Carpinus fangiana HOM05D002705 ORTHO05D004955 5.7e-18 97.1 518 26.1
Sc11g0004220 Simmondsia chinensis HOM05D002705 ORTHO05D004955 7.4e-18 96.7 537 25.1
Mapoly0020s0153 Marchantia polymorpha HOM05D002705 ORTHO05D004955 8.2e-17 93.2 707 24.0
CSS0042603 Camellia sinensis var. sinensis HOM05D002705 ORTHO05D004955 5.3e-16 90.5 371 26.4
AUR62042388 Chenopodium quinoa HOM05D002705 ORTHO05D004955 7.7e-15 86.7 314 29.0
Pp3s70_120 Physcomitrium patens HOM05D002705 ORTHO05D004955 1.7e-14 85.5 406 24.4
BraA03t14645Z Brassica rapa HOM05D002705 ORTHO05D004955 3.8e-14 84.3 770 21.4
CBR_g22322 Chara braunii HOM05D000019 ORTHO05D000002 3.8e-14 84.3 328 28.0
A03p55770 Brassica napus HOM05D002705 ORTHO05D004955 1.5e-13 82.4 773 21.3
BolC7t45891H Brassica oleracea HOM05D002705 ORTHO05D004955 1.9e-13 82.0 783 21.3
C07p54050 Brassica napus HOM05D002705 ORTHO05D004955 2.5e-13 81.6 758 21.5
CAN.G408.1 Capsicum annuum HOM05D002705 ORTHO05D004955 3.2e-13 81.3 227 28.6
AagrBONN_evm.TU.Sc2ySwM_340.578 Anthoceros agrestis HOM05D002705 ORTHO05D004955 3.0e-11 74.7 299 26.4
AagrBONN_evm.TU.Sc2ySwM_368.2221 Anthoceros agrestis HOM05D002705 ORTHO05D004955 1.5e-10 72.4 257 26.8
Medtr0675s0010 Medicago truncatula HOM05D002705 ORTHO05D004955 5.7e-10 70.5 210 30.0
unitig_578.g16613 Utricularia gibba HOM05D002705 ORTHO05D004955 4.8e-09 67.4 377 23.6
Hma1.2p1_2119F.1_g314360 Hydrangea macrophylla HOM05D002705 ORTHO05D004955 6.3e-09 67.0 189 28.6
SMO118G0116 Selaginella moellendorffii HOM05D002705 ORTHO05D004955 6.3e-09 67.0 487 24.2
Cre07.g343333 Chlamydomonas reinhardtii HOM05D002705 ORTHO05D004955 1.4e-08 65.9 271 29.2
MD07G1241700 Malus domestica HOM05D002705 ORTHO05D004955 4.1e-08 64.3 268 26.5
ATR0789G167 Amborella trichopoda HOM05D002705 ORTHO05D004955 7.0e-08 63.5 214 27.1
FAN05G3181 Fragaria x ananassa HOM05D002705 ORTHO05D004955 7.0e-08 63.5 264 25.0
Nn1g00770 Nelumbo nucifera HOM05D002705 ORTHO05D004955 2.6e-07 61.6 121 33.9
CBR_g212 Chara braunii HOM05D000019 ORTHO05D000048 7.7e-07 60.1 77 49.4
HPP92_027816 Vanilla planifolia HOM05D002705 ORTHO05D004955 1.7e-06 58.9 111 33.3
CAN.G1406.2 Capsicum annuum HOM05D002705 ORTHO05D004955 3.8e-06 57.8 294 23.5
MD07G1241600 Malus domestica HOM05D002705 ORTHO05D004955 5.0e-06 57.4 469 23.0
Cre07.g314400 Chlamydomonas reinhardtii HOM05D002705 ORTHO05D004955 6.5e-06 57.0 129 33.3


User provided reference genes

Program Settings