Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO119G0006 Selaginella moellendorffii HOM05D004873 ORTHO05D006122 7.9e-135 483.8 246 100.0
SMO351G0499 Selaginella moellendorffii HOM05D004873 ORTHO05D006122 2.4e-91 339.3 214 87.9
Oeu055452.2 Olea europaea HOM05D004873 ORTHO05D006122 3.3e-16 89.7 114 48.2
HanXRQChr12g0383471 Helianthus annuus HOM05D004873 ORTHO05D006122 5.6e-16 89.0 92 53.3
Lsat_1_v5_gn_4_6981 Lactuca sativa HOM05D004873 ORTHO05D006122 5.6e-16 89.0 133 43.6
Lj6A805G39 Lonicera japonica HOM05D004873 ORTHO05D006122 5.6e-16 89.0 132 43.9
Migut.L01408 Erythranthe guttata HOM05D004873 ORTHO05D006122 9.6e-16 88.2 88 53.4
CSS0025142 Camellia sinensis var. sinensis HOM05D004873 ORTHO05D006122 1.3e-15 87.8 92 53.3
DCAR_026543 Daucus carota HOM05D004873 ORTHO05D006122 1.3e-15 87.8 134 43.3
Dinv15307 Davidia involucrata HOM05D004873 ORTHO05D006122 1.6e-15 87.4 128 45.3
Potri.008G147100 Populus trichocarpa HOM05D004873 ORTHO05D006122 1.6e-15 87.4 149 43.6
MBI15_g36943_MAGBIO Magnolia biondii HOM05D004873 ORTHO05D006122 2.1e-15 87.0 120 48.3
HPP92_019184 Vanilla planifolia HOM05D004873 ORTHO05D006122 2.1e-15 87.0 128 44.5
HPP92_019185 Vanilla planifolia HOM05D004873 ORTHO05D006122 2.1e-15 87.0 128 44.5
THA.LOC104819514 Tarenaya hassleriana HOM05D004873 ORTHO05D006122 2.8e-15 86.7 88 52.3
THA.LOC104819547 Tarenaya hassleriana HOM05D004873 ORTHO05D006122 2.8e-15 86.7 88 52.3
MSTRG.7893 Avicennia marina HOM05D004873 ORTHO05D006122 3.6e-15 86.3 130 42.3
PGR102G2017 Punica granatum HOM05D004873 ORTHO05D006122 3.6e-15 86.3 123 45.5
Sopen05g001620 Solanum pennellii HOM05D004873 ORTHO05D006122 3.6e-15 86.3 131 42.7
CANSAT01G1467 Cannabis sativa HOM05D004873 ORTHO05D006122 4.8e-15 85.9 92 52.2
FvH4_4g34571 Fragaria vesca HOM05D004873 ORTHO05D006122 4.8e-15 85.9 92 53.3
FAN12G3868 Fragaria x ananassa HOM05D004873 ORTHO05D006122 4.8e-15 85.9 92 53.3
FAN17G2310 Fragaria x ananassa HOM05D004873 ORTHO05D006122 4.8e-15 85.9 92 53.3
Manes.13G031000 Manihot esculenta HOM05D004873 ORTHO05D006122 4.8e-15 85.9 114 48.2
Nn4g22808 Nelumbo nucifera HOM05D004873 ORTHO05D006122 4.8e-15 85.9 117 47.9
TAR374G0217 Trochodendron aralioides HOM05D004873 ORTHO05D006122 4.8e-15 85.9 92 54.3
Cc11_g14610 Coffea canephora HOM05D004873 ORTHO05D006122 6.2e-15 85.5 128 44.5
ECA199G0004 Erigeron canadensis HOM05D004873 ORTHO05D006122 6.2e-15 85.5 125 45.6
Potri.010G094700 Populus trichocarpa HOM05D004873 ORTHO05D006122 6.2e-15 85.5 114 49.1
Sabra10G0067000 Salix brachista HOM05D004873 ORTHO05D006122 6.2e-15 85.5 114 49.1
Carub.0002s0504 Capsella rubella HOM05D004873 ORTHO05D006122 8.1e-15 85.1 122 44.3
Cpa.g.sc69.19 Carica papaya HOM05D004873 ORTHO05D006122 8.1e-15 85.1 88 54.5
ClCG05G025280 Citrullus lanatus HOM05D004873 ORTHO05D006122 8.1e-15 85.1 92 52.2
CsaV3_5G031610 Cucumis sativus L. HOM05D004873 ORTHO05D006122 8.1e-15 85.1 92 52.2
Prupe.1G254700 Prunus persica HOM05D004873 ORTHO05D006122 8.1e-15 85.1 114 48.2
QL03p061438 Quercus lobata HOM05D004873 ORTHO05D006122 8.1e-15 85.1 88 54.5
TWI75G0297 Tripterygium wilfordii HOM05D004873 ORTHO05D006122 8.1e-15 85.1 126 44.4
GSVIVG01020233001 Vitis vinifera HOM05D004873 ORTHO05D006122 8.1e-15 85.1 115 47.8
BcaC06g31808 Brassica carinata HOM05D004873 ORTHO05D006122 1.1e-14 84.7 127 44.9
Haze_12170 Corylus avellana HOM05D004873 ORTHO05D006122 1.1e-14 84.7 152 39.5
RcHm_v2.0_Chr4g0443951 Rosa chinensis HOM05D004873 ORTHO05D006122 1.1e-14 84.7 114 48.2
Atru.chr11.2013 Acer truncatum HOM05D004873 ORTHO05D006122 1.4e-14 84.3 114 48.2
AL2G16455 Arabidopsis lyrata HOM05D004873 ORTHO05D006122 1.4e-14 84.3 122 43.4
AT1G60200 Arabidopsis thaliana HOM05D004873 ORTHO05D006122 1.4e-14 84.3 122 43.4
CiPaw.05G150500 Carya illinoinensis HOM05D004873 ORTHO05D006122 1.4e-14 84.3 88 53.4
Rhsim12G0047400 Rhododendron simsii HOM05D004873 ORTHO05D006122 1.4e-14 84.3 134 43.3
Sp2g04470 Schrenkiella parvula HOM05D004873 ORTHO05D006122 1.4e-14 84.3 88 53.4
Actinidia01706 Actinidia chinensis HOM05D004873 ORTHO05D006122 1.8e-14 84.0 148 41.2
Eucgr.B03347 Eucalyptus grandis HOM05D004873 ORTHO05D006122 1.8e-14 84.0 131 42.0
Thhalv10023242m.g Eutrema salsugineum HOM05D004873 ORTHO05D006122 1.8e-14 84.0 88 53.4
FAN07G2437 Fragaria x ananassa HOM05D004873 ORTHO05D006122 1.8e-14 84.0 114 47.4
FAN22G1569 Fragaria x ananassa HOM05D004873 ORTHO05D006122 1.8e-14 84.0 114 47.4
PGSC0003DMG400030977 Solanum tuberosum HOM05D004873 ORTHO05D006122 1.8e-14 84.0 127 43.3
TWI18G0605 Tripterygium wilfordii HOM05D004873 ORTHO05D006122 1.8e-14 84.0 92 52.2
TWI36G0907 Tripterygium wilfordii HOM05D004873 ORTHO05D006122 1.8e-14 84.0 126 44.4
vmacro01183 Vaccinium macrocarpon HOM05D004873 ORTHO05D006122 1.8e-14 84.0 134 43.3
ATR0691G293 Amborella trichopoda HOM05D004873 ORTHO05D006122 2.4e-14 83.6 123 46.3
DCAR_024143 Daucus carota HOM05D004873 ORTHO05D006122 2.4e-14 83.6 92 50.0
Ciclev10030647m.g Citrus clementina HOM05D004873 ORTHO05D006122 3.1e-14 83.2 128 45.3
Medtr5g034430 Medicago truncatula HOM05D004873 ORTHO05D006122 3.1e-14 83.2 92 50.0
Zm00001eb042420 Zea mays HOM05D004873 ORTHO05D006122 4.0e-14 82.8 132 45.5
Aqoxy3G02990_Aqoxy3G02991 Aquilegia oxysepala HOM05D004873 ORTHO05D006122 5.3e-14 82.4 120 45.8
arahy.Tifrunner.gnm1.ann1.SJZ9IC Arachis hypogaea HOM05D004873 ORTHO05D006122 5.3e-14 82.4 92 50.0
BcaC02g10690 Brassica carinata HOM05D004873 ORTHO05D006122 5.3e-14 82.4 102 48.0
A01p29150 Brassica napus HOM05D004873 ORTHO05D006122 5.3e-14 82.4 127 44.1
C04p26690 Brassica napus HOM05D004873 ORTHO05D006122 5.3e-14 82.4 102 48.0
C05p51270 Brassica napus HOM05D004873 ORTHO05D006122 5.3e-14 82.4 102 48.0
BolC4t24137H Brassica oleracea HOM05D004873 ORTHO05D006122 5.3e-14 82.4 102 48.0
BraA01t02979Z Brassica rapa HOM05D004873 ORTHO05D006122 5.3e-14 82.4 127 44.1
CAN.G376.10 Capsicum annuum HOM05D004873 ORTHO05D006122 5.3e-14 82.4 135 40.7
Cfa009139 Carpinus fangiana HOM05D004873 ORTHO05D006122 5.3e-14 82.4 127 44.9
AUR62005371 Chenopodium quinoa HOM05D004873 ORTHO05D006122 5.3e-14 82.4 92 50.0
Duzib251G0436 Durio zibethinus HOM05D004873 ORTHO05D006122 5.3e-14 82.4 129 42.6
Nitab4.5_0000113g0270 Nicotiana tabacum HOM05D004873 ORTHO05D006122 5.3e-14 82.4 139 40.3
Nitab4.5_0010954g0010 Nicotiana tabacum HOM05D004873 ORTHO05D006122 5.3e-14 82.4 139 40.3
Hund05991 Selenicereus undatus HOM05D004873 ORTHO05D006122 5.3e-14 82.4 120 43.3
BcaB04g20256 Brassica carinata HOM05D004873 ORTHO05D006122 6.9e-14 82.0 127 44.1
MELO3C012001.2 Cucumis melo HOM05D004873 ORTHO05D006122 6.9e-14 82.0 137 40.1
Dinv24864 Davidia involucrata HOM05D004873 ORTHO05D006122 6.9e-14 82.0 137 42.3
MD13G1091200 Malus domestica HOM05D004873 ORTHO05D006122 6.9e-14 82.0 114 46.5
MD16G1091700 Malus domestica HOM05D004873 ORTHO05D006122 6.9e-14 82.0 114 46.5
PSO063G1237 Papaver somniferum HOM05D004873 ORTHO05D006122 6.9e-14 82.0 92 52.2
PSO832G2005 Papaver somniferum HOM05D004873 ORTHO05D006122 6.9e-14 82.0 92 52.2
Aa31LG2G10110 Aethionema arabicum HOM05D004873 ORTHO05D006122 9.0e-14 81.6 128 40.6
Lalb_Chr05g0228131 Lupinus albus HOM05D004873 ORTHO05D006122 9.0e-14 81.6 92 50.0
Mapoly0148s0032 Marchantia polymorpha HOM05D004873 ORTHO05D006122 9.0e-14 81.6 92 51.1
VMungo1215G2983 Vigna mungo HOM05D004873 ORTHO05D006122 9.0e-14 81.6 128 43.0
EL10Ac6g13668 Beta vulgaris HOM05D004873 ORTHO05D006122 1.2e-13 81.3 88 51.1
BolC1t03651H Brassica oleracea HOM05D004873 ORTHO05D006122 1.2e-13 81.3 131 43.5
SGA_v2.0_scaffold165G38251 Striga asiatica HOM05D004873 ORTHO05D006122 1.2e-13 81.3 127 40.9
BcaC09g49418 Brassica carinata HOM05D004873 ORTHO05D006122 1.5e-13 80.9 127 44.1
C01p36930 Brassica napus HOM05D004873 ORTHO05D006122 1.5e-13 80.9 127 44.1
Pp3c16_19090 Physcomitrium patens HOM05D004873 ORTHO05D006122 1.5e-13 80.9 92 50.0
Pp3c25_3310 Physcomitrium patens HOM05D004873 ORTHO05D006122 1.5e-13 80.9 106 47.2
Psat2g106600 Pisum sativum HOM05D004873 ORTHO05D006122 1.5e-13 80.9 92 50.0
COL.COLO4_36971 Corchorus olitorius HOM05D004873 ORTHO05D006122 2.0e-13 80.5 120 44.2
Lalb_Chr16g0392411 Lupinus albus HOM05D004873 ORTHO05D006122 2.0e-13 80.5 128 43.0
CARHR052750 Cardamine hirsuta HOM05D004873 ORTHO05D006122 2.6e-13 80.1 111 45.0
Peaxi162Scf00338g00218 Petunia axillaris HOM05D004873 ORTHO05D006122 2.6e-13 80.1 121 44.6
Zm00001eb179020 Zea mays HOM05D004873 ORTHO05D006122 2.6e-13 80.1 102 49.0
Duzib248G0479 Durio zibethinus HOM05D004873 ORTHO05D006122 3.4e-13 79.7 132 40.9
Gohir.D02G163000 Gossypium hirsutum HOM05D004873 ORTHO05D006122 3.4e-13 79.7 116 44.0
Gorai.005G183000 Gossypium raimondii HOM05D004873 ORTHO05D006122 3.4e-13 79.7 116 44.0
Sed0006362 Sechium edule HOM05D004873 ORTHO05D006122 3.4e-13 79.7 137 39.4
Solyc05g005620.4 Solanum lycopersicum HOM05D004873 ORTHO05D006122 3.4e-13 79.7 131 42.0
TPR.G13590 Trifolium pratense HOM05D004873 ORTHO05D006122 3.4e-13 79.7 125 41.6
Glyma.01G031400 Glycine max HOM05D004873 ORTHO05D006122 4.5e-13 79.3 124 42.7
Hma1.2p1_0160F.1_g070740 Hydrangea macrophylla HOM05D004873 ORTHO05D006122 4.5e-13 79.3 128 41.4
TAR622G0484 Trochodendron aralioides HOM05D004873 ORTHO05D006122 4.5e-13 79.3 196 36.7
Glyma.02G034300 Glycine max HOM05D004873 ORTHO05D006122 5.8e-13 79.0 124 42.7
Sc11g0001220 Simmondsia chinensis HOM05D004873 ORTHO05D006122 5.8e-13 79.0 115 43.5
AUR62014033 Chenopodium quinoa HOM05D004873 ORTHO05D006122 7.6e-13 78.6 127 43.3
Ca_04600_v3 Cicer arietinum L. HOM05D004873 ORTHO05D006122 7.6e-13 78.6 125 42.4
Lj2g0008447 Lotus japonicus HOM05D004873 ORTHO05D006122 9.9e-13 78.2 128 42.2
Phvul.002G071900 Phaseolus vulgaris HOM05D004873 ORTHO05D006122 9.9e-13 78.2 128 41.4
Gohir.A03G140300 Gossypium hirsutum HOM05D004873 ORTHO05D006122 1.7e-12 77.4 116 43.1
unitig_27.g25195 Utricularia gibba HOM05D004873 ORTHO05D006122 2.9e-12 76.6 134 35.8
CBR_g45271 Chara braunii HOM05D000019 ORTHO05D000002 3.8e-12 76.3 112 44.6
arahy.Tifrunner.gnm1.ann1.QGK7DH Arachis hypogaea HOM05D004873 ORTHO05D006122 7.1e-11 72.0 115 40.0
Hma1.2p1_0867F.1_g230230 Hydrangea macrophylla HOM05D004873 ORTHO05D006122 1.6e-10 70.9 158 36.7
Oeu056734.1 Olea europaea HOM05D004873 ORTHO05D006122 1.6e-10 70.9 81 49.4
Ah.03g132650 Amaranthus hybridus HOM05D004873 ORTHO05D006122 2.7e-10 70.1 73 53.4
Aqoxy1G03520 Aquilegia oxysepala HOM05D004873 ORTHO05D006122 7.9e-10 68.6 69 55.1
SMO117G0118 Selaginella moellendorffii HOM05D004873 ORTHO05D006122 1.0e-09 68.2 103 41.7
CDE02G2297 Ceratophyllum demersum HOM05D001801 ORTHO05D001739 7.4e-08 62.0 106 43.4
SEGI_30430 Sequoiadendron giganteum HOM05D004873 ORTHO05D006122 2.8e-07 60.1 89 43.8
CDE01G0488 Ceratophyllum demersum HOM05D004873 ORTHO05D006122 4.8e-07 59.3 85 43.5
Medtr5g034435 Medicago truncatula HOM05D004873 ORTHO05D006122 3.1e-06 56.6 75 44.0
MCO16G428 Micromonas commoda HOM05D004873 ORTHO05D006122 3.1e-06 56.6 85 35.3


User provided reference genes

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