Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO118G0116 Selaginella moellendorffii HOM05D002705 ORTHO05D004955 0.0e+00 1796.9 942 100.0
SMO118G0423 Selaginella moellendorffii HOM05D002705 ORTHO05D004955 1.5e-154 551.2 1005 42.5
SMO263G0015 Selaginella moellendorffii HOM05D002705 ORTHO05D004955 4.5e-138 496.5 695 49.8
SMO118G0216 Selaginella moellendorffii HOM05D002705 ORTHO05D004955 1.3e-124 451.8 485 58.8
Pp3c1_29170 Physcomitrium patens HOM05D002705 ORTHO05D004955 1.9e-72 278.5 460 38.9
Mapoly0067s0049 Marchantia polymorpha HOM05D002705 ORTHO05D004955 6.2e-71 273.5 478 40.4
Atru.chr6.1980 Acer truncatum HOM05D002705 ORTHO05D004955 8.1e-71 273.1 522 36.8
Cpa.g.sc13.232 Carica papaya HOM05D002705 ORTHO05D004955 2.3e-70 271.6 522 37.9
Atru.chr6.2006 Acer truncatum HOM05D002705 ORTHO05D004955 3.1e-70 271.2 522 36.6
Cfa013602 Carpinus fangiana HOM05D002705 ORTHO05D004955 5.2e-70 270.4 527 36.6
QL09p027408 Quercus lobata HOM05D002705 ORTHO05D004955 5.2e-70 270.4 740 32.6
Haze_22224 Corylus avellana HOM05D002705 ORTHO05D004955 1.2e-69 269.2 489 37.4
RcHm_v2.0_Chr1g0373301 Rosa chinensis HOM05D002705 ORTHO05D004955 1.2e-69 269.2 524 38.2
PSO675G1384 Papaver somniferum HOM05D002705 ORTHO05D004955 4.4e-69 267.3 525 35.8
arahy.Tifrunner.gnm1.ann1.WYM0Y2 Arachis hypogaea HOM05D002705 ORTHO05D004955 7.5e-69 266.5 517 37.5
CiPaw.07G183200 Carya illinoinensis HOM05D002705 ORTHO05D004955 9.9e-69 266.2 524 35.9
FAN06G0843 Fragaria x ananassa HOM05D002705 ORTHO05D004955 1.3e-68 265.8 524 37.0
arahy.Tifrunner.gnm1.ann1.ZG0SUW Arachis hypogaea HOM05D002705 ORTHO05D004955 1.7e-68 265.4 517 37.5
FAN03G2179 Fragaria x ananassa HOM05D002705 ORTHO05D004955 1.7e-68 265.4 524 37.2
Sabra12G0083000 Salix brachista HOM05D002705 ORTHO05D004955 2.2e-68 265.0 523 36.7
FvH4_7g26710 Fragaria vesca HOM05D002705 ORTHO05D004955 2.9e-68 264.6 524 37.2
Phvul.L001885 Phaseolus vulgaris HOM05D002705 ORTHO05D004955 2.9e-68 264.6 527 36.2
Rhsim03G0158700 Rhododendron simsii HOM05D002705 ORTHO05D004955 3.7e-68 264.2 543 36.3
DCAR_014643 Daucus carota HOM05D002705 ORTHO05D004955 4.9e-68 263.8 739 32.6
Lalb_Chr06g0169611 Lupinus albus HOM05D002705 ORTHO05D004955 6.4e-68 263.5 524 35.9
Solyc03g093850.2 Solanum lycopersicum HOM05D002705 ORTHO05D004955 6.4e-68 263.5 523 36.7
Dinv34540 Davidia involucrata HOM05D002705 ORTHO05D004955 8.3e-68 263.1 525 36.8
Manes.14G040900 Manihot esculenta HOM05D002705 ORTHO05D004955 1.1e-67 262.7 518 37.3
Potri.012G114100 Populus trichocarpa HOM05D002705 ORTHO05D004955 1.1e-67 262.7 461 39.5
GSVIVG01013853001 Vitis vinifera HOM05D002705 ORTHO05D004955 1.1e-67 262.7 524 36.6
Gohir.A09G248500 Gossypium hirsutum HOM05D002705 ORTHO05D004955 1.4e-67 262.3 517 35.6
Thecc.03G145700 Theobroma cacao HOM05D002705 ORTHO05D004955 1.4e-67 262.3 518 36.3
Glyma.20G198400 Glycine max HOM05D002705 ORTHO05D004955 2.4e-67 261.5 526 35.6
FAN01G0508 Fragaria x ananassa HOM05D002705 ORTHO05D004955 3.2e-67 261.2 529 35.7
Ciclev10033740m.g Citrus clementina HOM05D002705 ORTHO05D004955 4.1e-67 260.8 529 35.9
ECA232G4016 Erigeron canadensis HOM05D002705 ORTHO05D004955 4.1e-67 260.8 516 35.9
Prupe.2G270600 Prunus persica HOM05D002705 ORTHO05D004955 4.1e-67 260.8 527 36.6
Actinidia13623 Actinidia chinensis HOM05D002705 ORTHO05D004955 5.4e-67 260.4 522 37.0
Sp7g23120 Schrenkiella parvula HOM05D002705 ORTHO05D004955 5.4e-67 260.4 533 36.6
Sopen03g024730 Solanum pennellii HOM05D002705 ORTHO05D004955 5.4e-67 260.4 523 36.5
MELO3C005443.2 Cucumis melo HOM05D002705 ORTHO05D004955 7.1e-67 260.0 527 35.9
Sed0003657 Sechium edule HOM05D002705 ORTHO05D004955 7.1e-67 260.0 533 34.5
Carub.0007s1591 Capsella rubella HOM05D002705 ORTHO05D004955 9.2e-67 259.6 749 31.9
Migut.F01210 Erythranthe guttata HOM05D002705 ORTHO05D004955 9.2e-67 259.6 524 36.8
HanXRQChr15g0493601 Helianthus annuus HOM05D002705 ORTHO05D004955 9.2e-67 259.6 524 35.5
BcaC06g32837 Brassica carinata HOM05D002705 ORTHO05D004955 1.2e-66 259.2 533 36.4
SalBow2G1886 Salvia bowleyana HOM05D002705 ORTHO05D004955 1.2e-66 259.2 529 36.3
Nitab4.5_0010058g0010 Nicotiana tabacum HOM05D002705 ORTHO05D004955 1.6e-66 258.8 522 34.9
CsaV3_5G005160 Cucumis sativus L. HOM05D002705 ORTHO05D004955 2.1e-66 258.5 529 35.2
Lj5g0005183 Lotus japonicus HOM05D002705 ORTHO05D004955 2.1e-66 258.5 530 36.0
ClCG01G004930 Citrullus lanatus HOM05D002705 ORTHO05D004955 2.7e-66 258.1 531 36.2
Psat6g140240 Pisum sativum HOM05D002705 ORTHO05D004955 3.5e-66 257.7 524 36.5
SGA_v2.0_scaffold352G49687 Striga asiatica HOM05D002705 ORTHO05D004955 4.6e-66 257.3 520 36.2
Gorai.006G273800 Gossypium raimondii HOM05D002705 ORTHO05D004955 1.0e-65 256.1 516 34.9
CANSAT56G1220 Cannabis sativa HOM05D002705 ORTHO05D004955 1.3e-65 255.8 446 37.9
Eucgr.K00116 Eucalyptus grandis HOM05D002705 ORTHO05D004955 1.3e-65 255.8 525 37.1
THA.LOC104825051 Tarenaya hassleriana HOM05D002705 ORTHO05D004955 1.3e-65 255.8 522 36.2
Medtr1g072800 Medicago truncatula HOM05D002705 ORTHO05D004955 1.7e-65 255.4 524 36.3
Nn1g00769 Nelumbo nucifera HOM05D002705 ORTHO05D004955 2.3e-65 255.0 525 36.2
SMO222G0004 Selaginella moellendorffii HOM05D002705 ORTHO05D004955 3.0e-65 254.6 283 57.6
COL.COLO4_37311 Corchorus olitorius HOM05D002705 ORTHO05D004955 3.9e-65 254.2 713 32.1
Nitab4.5_0000103g0340 Nicotiana tabacum HOM05D002705 ORTHO05D004955 3.9e-65 254.2 534 34.5
HPP92_003517 Vanilla planifolia HOM05D002705 ORTHO05D004955 3.9e-65 254.2 467 36.8
Hma1.2p1_2119F.1_g314370 Hydrangea macrophylla HOM05D002705 ORTHO05D004955 5.1e-65 253.8 738 32.4
MD07G1244800 Malus domestica HOM05D002705 ORTHO05D004955 5.1e-65 253.8 524 35.3
Aqoxy7G00864 Aquilegia oxysepala HOM05D002705 ORTHO05D004955 8.6e-65 253.1 534 35.4
TAR636G2282 Trochodendron aralioides HOM05D002705 ORTHO05D004955 8.6e-65 253.1 526 35.9
Peaxi162Scf00073g01729 Petunia axillaris HOM05D002705 ORTHO05D004955 1.1e-64 252.7 527 35.1
TPR.G18561 Trifolium pratense HOM05D002705 ORTHO05D004955 1.1e-64 252.7 524 36.3
AL7G28030 Arabidopsis lyrata HOM05D002705 ORTHO05D004955 1.5e-64 252.3 746 31.0
MSTRG.8400 Avicennia marina HOM05D002705 ORTHO05D004955 1.5e-64 252.3 525 35.6
Gohir.D09G249500 Gossypium hirsutum HOM05D002705 ORTHO05D004955 1.5e-64 252.3 516 34.9
Aa31LG7G10510 Aethionema arabicum HOM05D002705 ORTHO05D004955 1.9e-64 251.9 522 36.4
AT4G25120 Arabidopsis thaliana HOM05D002705 ORTHO05D004955 3.3e-64 251.1 743 31.2
Cc00_g24340 Coffea canephora HOM05D002705 ORTHO05D004955 5.6e-64 250.4 525 34.5
Lj8C49G2 Lonicera japonica HOM05D002705 ORTHO05D004955 7.3e-64 250.0 522 35.2
MD07G1243100 Malus domestica HOM05D002705 ORTHO05D004955 7.3e-64 250.0 536 35.3
Ah.02g115400 Amaranthus hybridus HOM05D002705 ORTHO05D004955 9.5e-64 249.6 688 31.4
vmacro06848 Vaccinium macrocarpon HOM05D002705 ORTHO05D004955 1.6e-63 248.8 530 35.7
Os07g0492100 Oryza sativa ssp. japonica HOM05D002705 ORTHO05D004955 3.6e-63 247.7 458 37.6
MD07G1245700 Malus domestica HOM05D002705 ORTHO05D004955 6.2e-63 246.9 537 34.5
Sc11g0004220 Simmondsia chinensis HOM05D002705 ORTHO05D004955 1.4e-62 245.7 518 35.7
Thhalv10024258m.g Eutrema salsugineum HOM05D002705 ORTHO05D004955 3.1e-62 244.6 571 35.2
ATR0665G329 Amborella trichopoda HOM05D002705 ORTHO05D004955 4.0e-62 244.2 477 38.6
MD07G1244300 Malus domestica HOM05D002705 ORTHO05D004955 4.0e-62 244.2 534 35.6
AagrBONN_evm.TU.Sc2ySwM_117.709 Anthoceros agrestis HOM05D002705 ORTHO05D004955 5.2e-62 243.8 458 38.4
Lsat_1_v5_gn_0_9880 Lactuca sativa HOM05D002705 ORTHO05D004955 3.4e-61 241.1 516 35.5
EL10As1g23078 Beta vulgaris HOM05D002705 ORTHO05D004955 5.8e-61 240.4 476 36.6
Oeu044165.1 Olea europaea HOM05D002705 ORTHO05D004955 1.7e-60 238.8 517 35.4
TWI39G0103 Tripterygium wilfordii HOM05D002705 ORTHO05D004955 5.4e-59 233.8 524 34.5
FAN10G0038 Fragaria x ananassa HOM05D002705 ORTHO05D004955 3.6e-55 221.1 553 32.5
PGR142G4199 Punica granatum HOM05D002705 ORTHO05D004955 5.2e-54 217.2 461 35.4
unitig_578.g16613 Utricularia gibba HOM05D002705 ORTHO05D004955 9.0e-54 216.5 695 29.1
A03p55770 Brassica napus HOM05D002705 ORTHO05D004955 5.8e-53 213.8 533 33.2
BraA03t14645Z Brassica rapa HOM05D002705 ORTHO05D004955 5.8e-53 213.8 533 33.2
C07p54050 Brassica napus HOM05D002705 ORTHO05D004955 2.2e-52 211.8 533 33.0
BolC7t45891H Brassica oleracea HOM05D002705 ORTHO05D004955 2.2e-52 211.8 533 33.0
Ca_09785_v3 Cicer arietinum L. HOM05D002705 ORTHO05D004955 4.2e-51 207.6 206 54.4
CAN.G408.1 Capsicum annuum HOM05D002705 ORTHO05D004955 7.3e-48 196.8 211 50.2
CAN.G1654.1 Capsicum annuum HOM05D002705 ORTHO05D004955 2.2e-44 185.3 253 43.1
MD07G1241600 Malus domestica HOM05D002705 ORTHO05D004955 3.8e-44 184.5 464 33.0
CSS0042603 Camellia sinensis var. sinensis HOM05D002705 ORTHO05D004955 1.4e-43 182.6 203 49.8
MD07G1243600 Malus domestica HOM05D002705 ORTHO05D004955 1.8e-41 175.6 659 26.7
CARHR232510 Cardamine hirsuta HOM05D002705 ORTHO05D004955 2.3e-41 175.3 450 32.7
AagrBONN_evm.TU.Sc2ySwM_340.578 Anthoceros agrestis HOM05D002705 ORTHO05D004955 3.0e-41 174.9 603 29.5
CAN.G1406.2 Capsicum annuum HOM05D002705 ORTHO05D004955 1.6e-39 169.1 208 46.2
Hma1.2p1_2119F.1_g314360 Hydrangea macrophylla HOM05D002705 ORTHO05D004955 2.0e-37 162.2 185 48.1
CBR_g55304 Chara braunii HOM05D002705 ORTHO05D004955 2.1e-26 125.6 351 30.2
AUR62042388 Chenopodium quinoa HOM05D002705 ORTHO05D004955 3.9e-25 121.3 533 26.1
Manes.14G040200 Manihot esculenta HOM05D002705 ORTHO05D004955 6.1e-18 97.4 126 46.8
Hma1.2p1_2119F.1_g314380 Hydrangea macrophylla HOM05D002705 ORTHO05D004955 2.5e-16 92.0 142 40.1
Nn1g00770 Nelumbo nucifera HOM05D002705 ORTHO05D004955 9.7e-16 90.1 124 42.7
VMungo0720G0654 Vigna mungo HOM05D002705 ORTHO05D004955 1.7e-15 89.4 120 47.5
SEGI_13522 Sequoiadendron giganteum HOM05D002705 ORTHO05D004955 2.4e-14 85.5 527 24.3
Pp3s32_280 Physcomitrium patens HOM05D020685 ORTHO05D022318 3.4e-13 81.6 185 31.4
SMO222G0017 Selaginella moellendorffii HOM05D006358 ORTHO05D008185 2.2e-12 79.0 108 48.1
AagrBONN_evm.TU.Sc2ySwM_362.2714 Anthoceros agrestis HOM05D002705 ORTHO05D004955 8.5e-12 77.0 174 36.2
SHI35079 Sapria himalayana HOM05D002705 ORTHO05D000001 8.5e-12 77.0 118 39.8
MCO05G634 Micromonas commoda HOM05D002705 ORTHO05D004955 7.2e-11 73.9 247 30.4
HPP92_027816 Vanilla planifolia HOM05D002705 ORTHO05D004955 2.1e-10 72.4 74 50.0
SMO119G0107 Selaginella moellendorffii HOM05D002705 ORTHO05D004955 1.8e-09 69.3 487 24.2
CBR_g22322 Chara braunii HOM05D000019 ORTHO05D000002 1.1e-08 66.6 212 29.7
SEGI_05624 Sequoiadendron giganteum HOM05D002705 ORTHO05D004955 1.1e-08 66.6 68 48.5
CAN.G1559.4 Capsicum annuum HOM05D002705 ORTHO05D004955 9.7e-08 63.5 97 39.2
SMO145G0194 Selaginella moellendorffii HOM05D006358 ORTHO05D008185 3.7e-07 61.6 31 100.0
Cre07.g343333 Chlamydomonas reinhardtii HOM05D002705 ORTHO05D004955 1.4e-06 59.7 209 30.1
Peaxi162Scf00073g01719 Petunia axillaris HOM05D002705 ORTHO05D004955 2.4e-06 58.9 68 45.6
Solyc03g093840.3 Solanum lycopersicum HOM05D002705 ORTHO05D004955 5.3e-06 57.8 66 47.0


User provided reference genes

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