Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO117G0109 Selaginella moellendorffii HOM05D007428 ORTHO05D009308 8.2e-51 203.4 98 100.0
ATR0661G028 Amborella trichopoda HOM05D007428 ORTHO05D009308 2.6e-28 128.6 84 70.2
DCAR_005573 Daucus carota HOM05D007428 ORTHO05D009308 3.3e-28 128.3 92 67.4
Actinidia10608 Actinidia chinensis HOM05D007428 ORTHO05D009308 4.4e-28 127.9 95 64.2
Nn1g01671 Nelumbo nucifera HOM05D007428 ORTHO05D009308 1.3e-27 126.3 92 64.1
MBI11_g02029_MAGBIO Magnolia biondii HOM05D007428 ORTHO05D009308 2.8e-27 125.2 92 64.1
SEGI_01808 Sequoiadendron giganteum HOM05D007428 ORTHO05D009308 3.7e-27 124.8 86 69.8
CDE04G2716 Ceratophyllum demersum HOM05D007428 ORTHO05D009308 4.8e-27 124.4 95 61.1
Gohir.D03G078400 Gossypium hirsutum HOM05D007428 ORTHO05D009308 6.3e-27 124.0 93 62.4
Gorai.003G085700 Gossypium raimondii HOM05D007428 ORTHO05D009308 6.3e-27 124.0 93 62.4
MELO3C005713.2 Cucumis melo HOM05D007428 ORTHO05D009308 1.1e-26 123.2 93 61.3
CsaV3_5G002410 Cucumis sativus L. HOM05D007428 ORTHO05D009308 1.1e-26 123.2 93 61.3
Manes.02G017900 Manihot esculenta HOM05D007428 ORTHO05D009308 1.1e-26 123.2 93 60.2
ClCG01G002350 Citrullus lanatus HOM05D007428 ORTHO05D009308 1.4e-26 122.9 93 61.3
Duzib084G1020 Durio zibethinus HOM05D007428 ORTHO05D009308 1.4e-26 122.9 93 61.3
GSVIVG01019416001 Vitis vinifera HOM05D007428 ORTHO05D009308 1.4e-26 122.9 92 63.0
Lalb_Chr25g0287261 Lupinus albus HOM05D007428 ORTHO05D009308 2.4e-26 122.1 93 63.4
Potri.001G099200 Populus trichocarpa HOM05D007428 ORTHO05D009308 3.1e-26 121.7 93 61.3
TAR374G0673 Trochodendron aralioides HOM05D007428 ORTHO05D009308 3.1e-26 121.7 92 62.0
Medtr7g091260 Medicago truncatula HOM05D007428 ORTHO05D009308 5.3e-26 120.9 93 64.5
Phvul.001G130100 Phaseolus vulgaris HOM05D007428 ORTHO05D009308 7.0e-26 120.6 90 65.6
Ciclev10023047m.g Citrus clementina HOM05D007428 ORTHO05D009308 2.0e-25 119.0 84 64.3
Dinv38899 Davidia involucrata HOM05D007428 ORTHO05D009308 2.6e-25 118.6 79 68.4
RcHm_v2.0_Chr7g0196601 Rosa chinensis HOM05D007428 ORTHO05D009308 2.6e-25 118.6 85 64.7
CiPaw.11G129900 Carya illinoinensis HOM05D007428 ORTHO05D009308 3.5e-25 118.2 85 64.7
Duzib205G1701 Durio zibethinus HOM05D007428 ORTHO05D009308 3.5e-25 118.2 93 60.2
Prupe.5G106400 Prunus persica HOM05D007428 ORTHO05D009308 4.5e-25 117.9 84 64.3
BcaB06g27627 Brassica carinata HOM05D007428 ORTHO05D009308 5.9e-25 117.5 84 61.9
FAN04G2816 Fragaria x ananassa HOM05D007428 ORTHO05D009308 5.9e-25 117.5 85 64.7
FAN13G2357 Fragaria x ananassa HOM05D007428 ORTHO05D009308 5.9e-25 117.5 85 64.7
FAN18G4254 Fragaria x ananassa HOM05D007428 ORTHO05D009308 5.9e-25 117.5 85 64.7
TAR375G0610 Trochodendron aralioides HOM05D007428 ORTHO05D009308 7.7e-25 117.1 90 62.2
Sabra01G0074400 Salix brachista HOM05D007428 ORTHO05D009308 1.0e-24 116.7 84 64.3
Thhalv10028001m.g Eutrema salsugineum HOM05D007428 ORTHO05D009308 1.3e-24 116.3 84 61.9
Gohir.D08G134500 Gossypium hirsutum HOM05D001458 ORTHO05D008462 1.3e-24 116.3 84 61.9
TPR.G18241 Trifolium pratense HOM05D007428 ORTHO05D009308 1.3e-24 116.3 93 62.4
Aqoxy7G00179 Aquilegia oxysepala HOM05D007428 ORTHO05D009308 1.7e-24 115.9 86 65.1
AUR62000169 Chenopodium quinoa HOM05D007428 ORTHO05D009308 1.7e-24 115.9 78 66.7
AUR62039842 Chenopodium quinoa HOM05D007428 ORTHO05D009308 1.7e-24 115.9 78 66.7
Gohir.A08G114300 Gossypium hirsutum HOM05D007428 ORTHO05D009308 1.7e-24 115.9 93 59.1
THA.LOC104809367 Tarenaya hassleriana HOM05D007428 ORTHO05D009308 1.7e-24 115.9 79 65.8
EL10Ac4g10178 Beta vulgaris HOM05D007428 ORTHO05D009308 2.2e-24 115.5 93 59.1
PGR031G0112 Punica granatum HOM05D007428 ORTHO05D009308 2.2e-24 115.5 92 58.7
Glyma.19G137300 Glycine max HOM05D007428 ORTHO05D009308 2.9e-24 115.2 90 64.4
BcaC02g08952 Brassica carinata HOM05D007428 ORTHO05D009308 3.8e-24 114.8 84 60.7
A04p14670 Brassica napus HOM05D007428 ORTHO05D009308 3.8e-24 114.8 84 60.7
C04p48540 Brassica napus HOM05D007428 ORTHO05D009308 3.8e-24 114.8 84 60.7
BolC4t26447H Brassica oleracea HOM05D007428 ORTHO05D009308 3.8e-24 114.8 84 60.7
BraA04t17107Z Brassica rapa HOM05D007428 ORTHO05D009308 3.8e-24 114.8 84 60.7
Atru.chr9.2117 Acer truncatum HOM05D007428 ORTHO05D009308 5.0e-24 114.4 84 60.7
AL7G47840 Arabidopsis lyrata HOM05D007428 ORTHO05D009308 6.5e-24 114.0 84 61.9
AT5G41560 Arabidopsis thaliana HOM05D007428 ORTHO05D009308 6.5e-24 114.0 84 61.9
Eucgr.D01813 Eucalyptus grandis HOM05D007428 ORTHO05D009308 6.5e-24 114.0 78 62.8
Sp7g00480 Schrenkiella parvula HOM05D007428 ORTHO05D009308 6.5e-24 114.0 84 60.7
Peaxi162Scf00102g01635 Petunia axillaris HOM05D007428 ORTHO05D009308 8.5e-24 113.6 84 61.9
Aa31LG9G500 Aethionema arabicum HOM05D007428 ORTHO05D009308 1.1e-23 113.2 95 56.8
Sed0012859 Sechium edule HOM05D007428 ORTHO05D009308 1.1e-23 113.2 93 58.1
Carub.0007s3391 Capsella rubella HOM05D007428 ORTHO05D009308 2.5e-23 112.1 84 60.7
CSS0042206 Camellia sinensis var. sinensis HOM05D007428 ORTHO05D009308 3.2e-23 111.7 92 59.8
MD06G1090900 Malus domestica HOM05D007428 ORTHO05D009308 4.2e-23 111.3 80 66.2
Cfa012244 Carpinus fangiana HOM05D007428 ORTHO05D009308 5.5e-23 110.9 94 58.5
Lj1g0002351 Lotus japonicus HOM05D007428 ORTHO05D009308 5.5e-23 110.9 93 57.0
PSO782G0783 Papaver somniferum HOM05D007428 ORTHO05D009308 5.5e-23 110.9 85 64.7
Duzib068G1017 Durio zibethinus HOM05D007428 ORTHO05D009308 7.2e-23 110.5 70 70.0
PGSC0003DMG400005826 Solanum tuberosum HOM05D007428 ORTHO05D009308 7.2e-23 110.5 84 60.7
CARHR287610 Cardamine hirsuta HOM05D007428 ORTHO05D009308 2.1e-22 109.0 84 58.3
Solyc08g008120.4 Solanum lycopersicum HOM05D007428 ORTHO05D009308 2.7e-22 108.6 84 59.5
Sopen08g003980 Solanum pennellii HOM05D007428 ORTHO05D009308 2.7e-22 108.6 84 59.5
ECA246G0502 Erigeron canadensis HOM05D007428 ORTHO05D009308 4.7e-22 107.8 84 59.5
CANSAT21G2180 Cannabis sativa HOM05D007428 ORTHO05D009308 8.0e-22 107.1 86 61.6
Lsat_1_v5_gn_3_8800 Lactuca sativa HOM05D007428 ORTHO05D009308 1.0e-21 106.7 91 57.1
SGA_v2.0_scaffold111G31471 Striga asiatica HOM05D007428 ORTHO05D009308 1.0e-21 106.7 77 62.3
arahy.Tifrunner.gnm1.ann1.I9CJRL Arachis hypogaea HOM05D007428 ORTHO05D009308 1.4e-21 106.3 90 56.7
Glyma.03G134700 Glycine max HOM05D007428 ORTHO05D009308 1.4e-21 106.3 84 61.9
FAN08G3453 Fragaria x ananassa HOM05D005196 ORTHO05D006107 1.8e-21 105.9 81 61.7
PSO478G2995 Papaver somniferum HOM05D007428 ORTHO05D009308 2.3e-21 105.5 85 63.5
Hma1.2p1_0216F.1_g091060 Hydrangea macrophylla HOM05D007428 ORTHO05D009308 3.0e-21 105.1 78 62.8
CiPaw.12G089300 Carya illinoinensis HOM05D007428 ORTHO05D009308 4.0e-21 104.8 95 55.8
Gorai.004G137700 Gossypium raimondii HOM05D007428 ORTHO05D009308 5.2e-21 104.4 70 65.7
Rhsim02G0235600 Rhododendron simsii HOM05D007428 ORTHO05D009308 6.7e-21 104.0 141 41.8
SalBow8G4511 Salvia bowleyana HOM05D005196 ORTHO05D006107 1.1e-20 103.2 81 60.5
Cc08_g15240 Coffea canephora HOM05D007428 ORTHO05D009308 1.5e-20 102.8 93 53.8
HPP92_001758 Vanilla planifolia HOM05D007428 ORTHO05D009308 1.5e-20 102.8 94 56.4
arahy.Tifrunner.gnm1.ann1.LGCW4P Arachis hypogaea HOM05D007428 ORTHO05D009308 4.4e-20 101.3 104 50.0
Zm00001eb001890 Zea mays HOM05D007428 ORTHO05D009308 1.3e-19 99.8 89 60.7
Zm00001eb403670 Zea mays HOM05D007428 ORTHO05D009308 2.4e-18 95.5 80 66.2
QL12p031804 Quercus lobata HOM05D007428 ORTHO05D009308 5.3e-18 94.4 133 41.4
Nn6g32110 Nelumbo nucifera HOM05D007428 ORTHO05D009308 7.0e-18 94.0 75 60.0
Hund14271 Selenicereus undatus HOM05D007428 ORTHO05D009308 1.7e-16 89.4 85 54.1
Os03g0125700 Oryza sativa ssp. japonica HOM05D007428 ORTHO05D009308 2.2e-16 89.0 91 54.9
Thecc.03G286400 Theobroma cacao HOM05D007428 ORTHO05D009308 1.6e-14 82.8 49 73.5
Gohir.A02G105400 Gossypium hirsutum HOM05D007428 ORTHO05D009308 6.1e-14 80.9 54 66.7
Sc01g0009840 Simmondsia chinensis HOM05D007428 ORTHO05D009308 3.0e-13 78.6 49 69.4
DCAR_008355 Daucus carota HOM05D001458 ORTHO05D008462 4.0e-13 78.2 67 55.2
Ah.06g194380 Amaranthus hybridus HOM05D007428 ORTHO05D009308 1.5e-12 76.3 164 33.5
Nitab4.5_0007906g0040 Nicotiana tabacum HOM05D007428 ORTHO05D009308 1.5e-12 76.3 94 47.9
MBI17_g11952_MAGBIO Magnolia biondii HOM05D007428 ORTHO05D009308 2.6e-12 75.5 49 65.3
FvH4_5g03180 Fragaria vesca HOM05D007428 ORTHO05D009308 5.7e-12 74.3 56 60.7
COL.COLO4_08363 Corchorus olitorius HOM05D007428 ORTHO05D009308 7.5e-12 73.9 64 54.7
HPP92_003464 Vanilla planifolia HOM05D007428 ORTHO05D009308 7.5e-12 73.9 66 54.5
MD14G1111700 Malus domestica HOM05D007428 ORTHO05D009308 3.7e-11 71.6 50 62.0
Cfa012240 Carpinus fangiana HOM05D007428 ORTHO05D009308 7.7e-09 63.9 65 50.8


User provided reference genes

Program Settings