Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO115G0240 Selaginella moellendorffii HOM05D003334 ORTHO05D004076 1.1e-167 593.2 299 100.0
Duzib170G0367 Durio zibethinus HOM05D003334 ORTHO05D004076 3.3e-42 176.4 305 35.7
Cre12.g522350 Chlamydomonas reinhardtii HOM05D003334 ORTHO05D004076 1.0e-40 171.4 327 33.3
Nn1g02302 Nelumbo nucifera HOM05D003334 ORTHO05D004076 1.4e-40 171.0 305 34.8
THA.LOC104821663 Tarenaya hassleriana HOM05D003334 ORTHO05D004076 1.5e-39 167.5 327 33.9
Duzib168G1687 Durio zibethinus HOM05D003334 ORTHO05D004076 2.0e-39 167.2 326 33.1
HanXRQChr17g0559071 Helianthus annuus HOM05D003334 ORTHO05D004076 2.0e-39 167.2 327 32.7
Manes.12G077800 Manihot esculenta HOM05D003334 ORTHO05D004076 2.0e-39 167.2 327 33.3
THA.LOC104802839 Tarenaya hassleriana HOM05D003334 ORTHO05D004076 3.4e-39 166.4 327 33.6
Dinv27617 Davidia involucrata HOM05D003334 ORTHO05D004076 4.4e-39 166.0 327 33.3
HanXRQChr11g0333651 Helianthus annuus HOM05D003334 ORTHO05D004076 4.4e-39 166.0 315 34.0
Ca_14800_v3 Cicer arietinum L. HOM05D003334 ORTHO05D004076 5.8e-39 165.6 330 33.6
Gohir.D09G101200 Gossypium hirsutum HOM05D003334 ORTHO05D004076 5.8e-39 165.6 327 32.7
Gorai.006G118600 Gossypium raimondii HOM05D003334 ORTHO05D004076 5.8e-39 165.6 327 32.7
Thecc.09G264900 Theobroma cacao HOM05D003334 ORTHO05D004076 7.5e-39 165.2 327 32.7
Carub.0003s0375 Capsella rubella HOM05D003334 ORTHO05D004076 9.8e-39 164.9 327 33.0
ATR0743G002 Amborella trichopoda HOM05D003334 ORTHO05D004076 1.3e-38 164.5 327 31.8
Gohir.A09G104500 Gossypium hirsutum HOM05D003334 ORTHO05D004076 1.3e-38 164.5 327 32.7
MBI07_g42069_MAGBIO Magnolia biondii HOM05D003334 ORTHO05D004076 1.3e-38 164.5 326 31.9
PRCOL_00004976 Prasinoderma coloniale HOM05D003334 ORTHO05D004076 1.3e-38 164.5 327 34.3
GSVIVG01020576001 Vitis vinifera HOM05D003334 ORTHO05D004076 1.3e-38 164.5 327 33.6
Ciclev10008518m.g Citrus clementina HOM05D003334 ORTHO05D004076 1.7e-38 164.1 327 33.3
FAN22G0185 Fragaria x ananassa HOM05D003334 ORTHO05D004076 1.7e-38 164.1 327 33.3
Lj7A725T58 Lonicera japonica HOM05D003334 ORTHO05D004076 1.7e-38 164.1 327 32.7
TAR365G0738 Trochodendron aralioides HOM05D003334 ORTHO05D004076 1.7e-38 164.1 325 32.9
ClCG09G011880 Citrullus lanatus HOM05D003334 ORTHO05D004076 3.7e-38 162.9 327 32.7
HPP92_011708 Vanilla planifolia HOM05D003334 ORTHO05D004076 3.7e-38 162.9 289 35.3
MSTRG.11832 Avicennia marina HOM05D003334 ORTHO05D004076 4.9e-38 162.5 327 32.7
ECA238G1984 Erigeron canadensis HOM05D003334 ORTHO05D004076 4.9e-38 162.5 312 31.7
Atru.chr7.238 Acer truncatum HOM05D003334 ORTHO05D004076 6.4e-38 162.2 313 34.5
AL3G14620 Arabidopsis lyrata HOM05D003334 ORTHO05D004076 6.4e-38 162.2 327 33.0
CSS0022391 Camellia sinensis var. sinensis HOM05D003334 ORTHO05D004076 6.4e-38 162.2 327 33.0
CSS0036286 Camellia sinensis var. sinensis HOM05D003334 ORTHO05D004076 6.4e-38 162.2 327 33.3
Psat2g164840 Pisum sativum HOM05D003334 ORTHO05D004076 6.4e-38 162.2 327 32.7
Aqoxy7G02117 Aquilegia oxysepala HOM05D003334 ORTHO05D004076 8.3e-38 161.8 327 33.3
Thhalv10020864m.g Eutrema salsugineum HOM05D003334 ORTHO05D004076 8.3e-38 161.8 327 33.0
FAN17G0794 Fragaria x ananassa HOM05D003334 ORTHO05D004076 8.3e-38 161.8 327 33.0
Lsat_1_v5_gn_2_16301 Lactuca sativa HOM05D003334 ORTHO05D004076 8.3e-38 161.8 312 32.1
SalBow8G4285 Salvia bowleyana HOM05D003334 ORTHO05D004076 8.3e-38 161.8 326 32.2
COL.COLO4_25317 Corchorus olitorius HOM05D003334 ORTHO05D004076 1.1e-37 161.4 327 33.0
Dinv04743 Davidia involucrata HOM05D003334 ORTHO05D004076 1.1e-37 161.4 327 32.1
FvH4_4g11950 Fragaria vesca HOM05D003334 ORTHO05D004076 1.1e-37 161.4 327 32.7
FAN12G4063 Fragaria x ananassa HOM05D003334 ORTHO05D004076 1.1e-37 161.4 327 32.7
BcaB04g21362 Brassica carinata HOM05D003334 ORTHO05D004076 1.4e-37 161.0 327 32.4
Migut.E01397 Erythranthe guttata HOM05D003334 ORTHO05D004076 1.4e-37 161.0 327 31.5
Glyma.03G108900 Glycine max HOM05D003334 ORTHO05D004076 1.4e-37 161.0 332 32.5
Psat4g222840 Pisum sativum HOM05D003334 ORTHO05D004076 1.9e-37 160.6 327 32.4
TAR636G1778 Trochodendron aralioides HOM05D003334 ORTHO05D004076 1.9e-37 160.6 327 32.1
Zm00001eb054210 Zea mays HOM05D003334 ORTHO05D004076 1.9e-37 160.6 327 31.8
arahy.Tifrunner.gnm1.ann1.GB3JX0 Arachis hypogaea HOM05D003334 ORTHO05D004076 2.4e-37 160.2 327 32.4
BcaC01g04366 Brassica carinata HOM05D003334 ORTHO05D004076 2.4e-37 160.2 327 32.7
A03p33670 Brassica napus HOM05D003334 ORTHO05D004076 2.4e-37 160.2 327 32.7
C03p40860 Brassica napus HOM05D003334 ORTHO05D004076 2.4e-37 160.2 327 32.7
CANSAT54G0453 Cannabis sativa HOM05D003334 ORTHO05D004076 2.4e-37 160.2 327 31.8
RcHm_v2.0_Chr7g0223011 Rosa chinensis HOM05D003334 ORTHO05D004076 2.4e-37 160.2 312 33.0
BcaB04g19317 Brassica carinata HOM05D003334 ORTHO05D004076 3.2e-37 159.8 327 33.0
MD04G1236500 Malus domestica HOM05D003334 ORTHO05D004076 3.2e-37 159.8 327 31.8
Prupe.7G057800 Prunus persica HOM05D003334 ORTHO05D004076 3.2e-37 159.8 327 31.5
Os12g0540900 Oryza sativa ssp. japonica HOM05D003334 ORTHO05D004076 4.1e-37 159.5 328 32.3
Sed0023632 Sechium edule HOM05D003334 ORTHO05D004076 4.1e-37 159.5 327 32.1
CDE08G0778 Ceratophyllum demersum HOM05D003334 ORTHO05D004076 5.4e-37 159.1 327 30.9
Mapoly0053s0020 Marchantia polymorpha HOM05D003334 ORTHO05D004076 5.4e-37 159.1 312 31.4
BcaC09g47791 Brassica carinata HOM05D003334 ORTHO05D004076 7.0e-37 158.7 327 32.1
Eucgr.B01628 Eucalyptus grandis HOM05D003334 ORTHO05D004076 7.0e-37 158.7 327 32.1
Glyma.13G008200 Glycine max HOM05D003334 ORTHO05D004076 7.0e-37 158.7 332 32.2
MD12G1255800 Malus domestica HOM05D003334 ORTHO05D004076 7.0e-37 158.7 327 31.8
Oeu044972.2 Olea europaea HOM05D003334 ORTHO05D004076 7.0e-37 158.7 312 32.4
PGR119G1638 Punica granatum HOM05D003334 ORTHO05D004076 9.2e-37 158.3 327 32.4
Solyc08g074410.4 Solanum lycopersicum HOM05D003334 ORTHO05D004076 9.2e-37 158.3 326 31.6
Sopen08g023060 Solanum pennellii HOM05D003334 ORTHO05D004076 9.2e-37 158.3 326 31.6
BolC3t16365H Brassica oleracea HOM05D003334 ORTHO05D004076 1.2e-36 157.9 333 32.1
Prupe.7G057000 Prunus persica HOM05D003334 ORTHO05D004076 1.2e-36 157.9 327 31.5
RcHm_v2.0_Chr3g0493481 Rosa chinensis HOM05D003334 ORTHO05D004076 1.2e-36 157.9 312 32.7
Aqoxy7G03650 Aquilegia oxysepala HOM05D003334 ORTHO05D004076 2.0e-36 157.1 328 32.9
Eucgr.B01376 Eucalyptus grandis HOM05D003334 ORTHO05D004076 2.0e-36 157.1 327 32.1
Lalb_Chr21g0312861 Lupinus albus HOM05D003334 ORTHO05D004076 2.0e-36 157.1 327 32.4
Potri.009G159300 Populus trichocarpa HOM05D003334 ORTHO05D004076 2.0e-36 157.1 327 32.1
AT3G04600 Arabidopsis thaliana HOM05D003334 ORTHO05D004076 2.7e-36 156.8 313 33.2
unitig_32.g11639 Utricularia gibba HOM05D003334 ORTHO05D004076 2.7e-36 156.8 327 31.5
Hma1.2p1_0123F.1_g058080 Hydrangea macrophylla HOM05D003334 ORTHO05D004076 4.6e-36 156.0 327 31.8
Sabra09G0124600 Salix brachista HOM05D003334 ORTHO05D004076 4.6e-36 156.0 327 31.8
Oeu028097.1 Olea europaea HOM05D003334 ORTHO05D004076 7.8e-36 155.2 312 33.3
A01p40810 Brassica napus HOM05D003334 ORTHO05D004076 1.0e-35 154.8 327 31.5
BNapus_Darmor_BZH_scaffold_78p00900 Brassica napus HOM05D003334 ORTHO05D004076 1.0e-35 154.8 327 31.5
PSO170G1996 Papaver somniferum HOM05D003334 ORTHO05D004076 1.0e-35 154.8 310 31.9
Medtr8g007305 Medicago truncatula HOM05D003334 ORTHO05D004076 1.3e-35 154.5 327 31.5
BolC1t05738H Brassica oleracea HOM05D003334 ORTHO05D004076 1.7e-35 154.1 333 31.8
SHI16564 Sapria himalayana HOM05D003334 ORTHO05D004076 1.7e-35 154.1 330 32.7
BraA03t12541Z Brassica rapa HOM05D003334 ORTHO05D004076 2.3e-35 153.7 340 31.8
Phvul.010G046300 Phaseolus vulgaris HOM05D003334 ORTHO05D004076 2.3e-35 153.7 315 32.7
VMungo0331G0230 Vigna mungo HOM05D003334 ORTHO05D004076 2.3e-35 153.7 314 32.2
Lj3g0011249 Lotus japonicus HOM05D003334 ORTHO05D004076 3.0e-35 153.3 327 31.5
SMO143G0103 Selaginella moellendorffii HOM05D003334 ORTHO05D004076 3.0e-35 153.3 330 31.2
TPR.G5320 Trifolium pratense HOM05D003334 ORTHO05D004076 3.0e-35 153.3 327 32.1
BraA01t04517Z Brassica rapa HOM05D003334 ORTHO05D004076 6.6e-35 152.1 333 31.5
PSO063G6945 Papaver somniferum HOM05D003334 ORTHO05D004076 8.6e-35 151.8 310 31.6
Pp3c2_27540 Physcomitrium patens HOM05D003334 ORTHO05D004076 1.1e-34 151.4 310 32.9
QL06p038393 Quercus lobata HOM05D003334 ORTHO05D004076 1.1e-34 151.4 327 30.9
Ah.15g091810 Amaranthus hybridus HOM05D003334 ORTHO05D004076 1.5e-34 151.0 312 32.1
CiPaw.07G196900 Carya illinoinensis HOM05D003334 ORTHO05D004076 1.5e-34 151.0 327 31.2
Sp3g03440 Schrenkiella parvula HOM05D003334 ORTHO05D004076 1.5e-34 151.0 327 32.1
Aa31LG5G20570 Aethionema arabicum HOM05D003334 ORTHO05D004076 1.9e-34 150.6 335 31.6
CAN.G195.16 Capsicum annuum HOM05D003334 ORTHO05D004076 2.5e-34 150.2 326 31.6
Cfa013451 Carpinus fangiana HOM05D003334 ORTHO05D004076 3.3e-34 149.8 329 31.3
Sp6g11650 Schrenkiella parvula HOM05D003334 ORTHO05D004076 7.3e-34 148.7 325 31.1
TWI15G0949 Tripterygium wilfordii HOM05D003334 ORTHO05D004076 1.2e-33 147.9 327 31.2
vmacro00932 Vaccinium macrocarpon HOM05D003334 ORTHO05D004076 1.2e-33 147.9 343 30.0
arahy.Tifrunner.gnm1.ann1.L2SHRD Arachis hypogaea HOM05D003334 ORTHO05D004076 2.1e-33 147.1 354 30.2
Thhalv10004344m.g Eutrema salsugineum HOM05D003334 ORTHO05D004076 2.1e-33 147.1 327 31.8
CsaV3_5G014480 Cucumis sativus L. HOM05D003334 ORTHO05D004076 3.6e-33 146.4 303 33.3
BNapus_Darmor_BZH_scaffold_78p01040 Brassica napus HOM05D004384 ORTHO05D005797 6.2e-33 145.6 329 30.7
Actinidia29400 Actinidia chinensis HOM05D003334 ORTHO05D004076 8.0e-33 145.2 329 31.0
Atru.chr5.3183 Acer truncatum HOM05D003334 ORTHO05D004076 1.8e-32 144.1 329 31.6
Hund21749 Selenicereus undatus HOM05D003334 ORTHO05D004076 2.3e-32 143.7 279 32.6
BcaB06g25549 Brassica carinata HOM05D003334 ORTHO05D004076 4.0e-32 142.9 325 29.8
Rhsim12G0003500 Rhododendron simsii HOM05D003334 ORTHO05D004076 4.0e-32 142.9 364 29.7
BcaC09g47814 Brassica carinata HOM05D003334 ORTHO05D004076 8.9e-32 141.7 328 30.8
TWI34G0756 Tripterygium wilfordii HOM05D003334 ORTHO05D004076 8.9e-32 141.7 327 30.0
BolC1t05722H Brassica oleracea HOM05D003334 ORTHO05D004076 1.2e-31 141.4 328 30.2
BraA01t04501Z Brassica rapa HOM05D004384 ORTHO05D005797 1.2e-31 141.4 330 30.3
Haze_07729 Corylus avellana HOM05D003334 ORTHO05D004076 2.0e-31 140.6 348 29.6
MCO14G308 Micromonas commoda HOM05D003334 ORTHO05D004076 4.4e-31 139.4 328 29.6
BcaC09g48536 Brassica carinata HOM05D003334 ORTHO05D004076 5.8e-31 139.0 323 29.7
A07p01960 Brassica napus HOM05D003334 ORTHO05D004076 9.8e-31 138.3 328 30.5
BraA07t27995Z Brassica rapa HOM05D003334 ORTHO05D004076 9.8e-31 138.3 328 30.5
EL10Ac4g09810 Beta vulgaris HOM05D003334 ORTHO05D004076 1.3e-30 137.9 377 27.6
Hma1.2p1_1064F.1_g253620 Hydrangea macrophylla HOM05D003334 ORTHO05D004076 4.9e-30 136.0 316 32.3
BolC3t16362H Brassica oleracea HOM05D003334 ORTHO05D004076 4.1e-29 132.9 283 32.2
SGA_v2.0_scaffold269G46296 Striga asiatica HOM05D003334 ORTHO05D004076 2.7e-28 130.2 272 30.1
CBR_g37637 Chara braunii HOM05D003334 ORTHO05D004076 6.0e-28 129.0 329 30.4
BcaB04g21381 Brassica carinata HOM05D003334 ORTHO05D004076 2.3e-27 127.1 325 28.9
Aa31LG5G15020 Aethionema arabicum HOM05D003334 ORTHO05D004076 3.0e-27 126.7 325 29.5
Nitab4.5_0003036g0010 Nicotiana tabacum HOM05D003334 ORTHO05D004076 8.6e-27 125.2 293 30.4
FAN07G2734 Fragaria x ananassa HOM05D003334 ORTHO05D004076 1.6e-25 120.9 327 29.4
AUR62009179 Chenopodium quinoa HOM05D003334 ORTHO05D004076 2.1e-25 120.6 303 30.0
SGA_v2.0_scaffold447G51751 Striga asiatica HOM05D003334 ORTHO05D004076 8.1e-25 118.6 164 37.2
BolC7t40804H Brassica oleracea HOM05D003334 ORTHO05D004076 1.1e-24 118.2 280 29.6
CARHR078790 Cardamine hirsuta HOM05D003334 ORTHO05D004076 1.1e-24 118.2 215 33.0
Haze_26816 Corylus avellana HOM05D003334 ORTHO05D004076 1.4e-24 117.9 308 28.6
AUR62005286 Chenopodium quinoa HOM05D003334 ORTHO05D004076 5.2e-24 115.9 145 38.6
Peaxi162Scf00213g01416 Petunia axillaris HOM05D003334 ORTHO05D004076 5.2e-24 115.9 306 28.4
DCAR_018748 Daucus carota HOM05D003334 ORTHO05D004076 2.0e-23 114.0 163 36.8
Oeu063204.2 Olea europaea HOM05D003334 ORTHO05D004076 2.6e-23 113.6 132 41.7
QL01p002104 Quercus lobata HOM05D003334 ORTHO05D004076 7.5e-23 112.1 140 38.6
Sc06g0005190 Simmondsia chinensis HOM05D003334 ORTHO05D004076 2.9e-22 110.2 140 38.6
BcaB03g16657 Brassica carinata HOM05D003334 ORTHO05D004076 8.3e-22 108.6 324 27.2
ECA233G4312 Erigeron canadensis HOM05D003334 ORTHO05D004076 4.1e-21 106.3 98 44.9
BolC3t16371H Brassica oleracea HOM05D003334 ORTHO05D004076 2.5e-18 97.1 96 46.9
BolC3t16384H Brassica oleracea HOM05D003334 ORTHO05D004076 3.3e-18 96.7 96 46.9
BolC3t16373H Brassica oleracea HOM05D003334 ORTHO05D004076 5.6e-18 95.9 96 45.8
C03p40970 Brassica napus HOM05D003334 ORTHO05D004076 7.3e-18 95.5 96 45.8
Thhalv10003092m.g Eutrema salsugineum HOM05D003334 ORTHO05D004076 1.2e-17 94.7 364 26.1
AagrBONN_evm.TU.Sc2ySwM_228.5148 Anthoceros agrestis HOM05D003334 ORTHO05D004076 1.1e-16 91.7 98 43.9
Nitab4.5_0000288g0150 Nicotiana tabacum HOM05D003334 ORTHO05D004076 1.8e-16 90.9 87 44.8
Sabra04G0133700 Salix brachista HOM05D003334 ORTHO05D004076 4.0e-16 89.7 119 40.3
Peaxi162Scf00020g00242 Petunia axillaris HOM05D003334 ORTHO05D004076 1.3e-14 84.7 235 31.1
Nitab4.5_0009273g0030 Nicotiana tabacum HOM05D003334 ORTHO05D004076 7.1e-13 79.0 303 25.4
Cpa.g.sc1142.2 Carica papaya HOM05D003334 ORTHO05D004076 9.2e-13 78.6 260 27.3
C07p04090 Brassica napus HOM05D003334 ORTHO05D004076 7.8e-12 75.5 214 29.4
SEGI_09752 Sequoiadendron giganteum HOM05D003334 ORTHO05D004076 4.3e-10 69.7 62 50.0
TPR.G21208 Trifolium pratense HOM05D003334 ORTHO05D004076 8.1e-09 65.5 140 30.0
QL12p030357 Quercus lobata HOM05D003334 ORTHO05D004076 2.9e-06 57.0 41 61.0
Cc02_g30090 Coffea canephora HOM05D003334 ORTHO05D004076 3.8e-06 56.6 62 37.1


User provided reference genes

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