Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO115G0172 Selaginella moellendorffii HOM05D002762 ORTHO05D008831 0.0e+00 1243.4 614 100.0
Mapoly0055s0097 Marchantia polymorpha HOM05D002762 ORTHO05D008831 8.7e-191 671.0 637 54.9
MBI19_g15847_MAGBIO Magnolia biondii HOM05D002762 ORTHO05D008831 2.5e-190 669.5 632 53.2
Aqoxy5G00558 Aquilegia oxysepala HOM05D002762 ORTHO05D008831 1.8e-188 663.3 619 53.5
ATR0626G043 Amborella trichopoda HOM05D002762 ORTHO05D008831 2.0e-187 659.8 637 52.3
Gohir.D09G232800 Gossypium hirsutum HOM05D002762 ORTHO05D008831 3.4e-187 659.1 632 52.8
arahy.Tifrunner.gnm1.ann1.08LYWQ Arachis hypogaea HOM05D002762 ORTHO05D008831 7.6e-187 657.9 624 53.0
Gorai.006G255700 Gossypium raimondii HOM05D002762 ORTHO05D008831 7.6e-187 657.9 632 52.8
QL06p006121 Quercus lobata HOM05D002762 ORTHO05D008831 1.7e-186 656.8 634 52.4
Migut.G00245 Erythranthe guttata HOM05D002762 ORTHO05D008831 2.2e-186 656.4 624 52.4
Migut.G00243 Erythranthe guttata HOM05D002762 ORTHO05D008831 2.9e-186 656.0 624 52.4
Lalb_Chr07g0177471 Lupinus albus HOM05D002762 ORTHO05D008831 2.9e-186 656.0 628 52.5
MSTRG.3975 Avicennia marina HOM05D002762 ORTHO05D008831 3.8e-186 655.6 626 51.6
Potri.010G028600 Populus trichocarpa HOM05D002762 ORTHO05D008831 4.9e-186 655.2 636 52.0
Gohir.A09G231700 Gossypium hirsutum HOM05D002762 ORTHO05D008831 1.1e-185 654.1 632 52.4
TWI53G0007 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 1.1e-185 654.1 634 52.8
Ciclev10004552m.g Citrus clementina HOM05D002762 ORTHO05D008831 1.9e-185 653.3 631 52.3
TAR365G0003 Trochodendron aralioides HOM05D002762 ORTHO05D008831 1.9e-185 653.3 636 53.1
Lj4g0021299 Lotus japonicus HOM05D002762 ORTHO05D008831 7.1e-185 651.4 621 52.2
Thecc.04G271400 Theobroma cacao HOM05D002762 ORTHO05D008831 1.2e-184 650.6 632 52.8
SGA_v2.0_scaffold237G43848 Striga asiatica HOM05D002762 ORTHO05D008831 2.1e-184 649.8 620 51.9
Medtr4g118010 Medicago truncatula HOM05D002762 ORTHO05D008831 3.5e-184 649.0 624 52.4
Glyma.17G019900 Glycine max HOM05D002762 ORTHO05D008831 1.7e-183 646.7 628 52.2
Ca_21567_v3 Cicer arietinum L. HOM05D002762 ORTHO05D008831 8.7e-183 644.4 621 53.5
TPR.G28123 Trifolium pratense HOM05D002762 ORTHO05D008831 8.7e-183 644.4 621 52.3
Cc03_g02810 Coffea canephora HOM05D002762 ORTHO05D008831 2.5e-182 642.9 630 50.0
Phvul.003G097700 Phaseolus vulgaris HOM05D002762 ORTHO05D008831 7.3e-182 641.3 627 51.4
Actinidia40215 Actinidia chinensis HOM05D002762 ORTHO05D008831 9.6e-182 641.0 624 51.6
GSVIVG01017858001 Vitis vinifera HOM05D002762 ORTHO05D008831 1.3e-181 640.6 632 51.9
CSS0041967 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 1.6e-181 640.2 632 51.7
VMungo1215G1507 Vigna mungo HOM05D002762 ORTHO05D008831 1.6e-181 640.2 629 52.3
CANSAT78G1603 Cannabis sativa HOM05D002762 ORTHO05D008831 3.6e-181 639.0 637 52.0
PSO210G2175 Papaver somniferum HOM05D002762 ORTHO05D008831 6.2e-181 638.3 631 50.2
Psat4g031200 Pisum sativum HOM05D002762 ORTHO05D008831 6.2e-181 638.3 624 52.2
ClCG06G005650 Citrullus lanatus HOM05D002762 ORTHO05D008831 9.0e-180 634.4 632 49.7
MD16G1180200 Malus domestica HOM05D002762 ORTHO05D008831 1.5e-179 633.6 634 50.6
Manes.03G187600 Manihot esculenta HOM05D002762 ORTHO05D008831 3.4e-179 632.5 614 51.6
arahy.Tifrunner.gnm1.ann1.ZAIR7G Arachis hypogaea HOM05D002762 ORTHO05D008831 4.5e-179 632.1 617 52.4
PSO832G0886 Papaver somniferum HOM05D002762 ORTHO05D008831 5.8e-179 631.7 631 50.1
THA.LOC104802606 Tarenaya hassleriana HOM05D002762 ORTHO05D008831 7.6e-179 631.3 626 52.2
CsaV3_6G005500 Cucumis sativus L. HOM05D002762 ORTHO05D008831 3.8e-178 629.0 634 49.1
Duzib052G0147 Durio zibethinus HOM05D002762 ORTHO05D008831 4.9e-178 628.6 632 51.1
FvH4_4g14000 Fragaria vesca HOM05D002762 ORTHO05D008831 8.4e-178 627.9 635 50.7
FAN07G1246 Fragaria x ananassa HOM05D002762 ORTHO05D008831 1.4e-177 627.1 635 50.6
RcHm_v2.0_Chr4g0419641 Rosa chinensis HOM05D002762 ORTHO05D008831 3.2e-177 625.9 635 50.2
Rhsim04G0212200 Rhododendron simsii HOM05D002762 ORTHO05D008831 4.2e-177 625.5 631 50.6
FAN22G0551 Fragaria x ananassa HOM05D002762 ORTHO05D008831 5.4e-177 625.2 635 50.1
FAN12G0174 Fragaria x ananassa HOM05D002762 ORTHO05D008831 9.3e-177 624.4 637 50.5
Duzib212G0752 Durio zibethinus HOM05D002762 ORTHO05D008831 1.6e-176 623.6 629 51.2
Nn4g26133 Nelumbo nucifera HOM05D002762 ORTHO05D008831 1.6e-176 623.6 605 52.7
vmacro08246 Vaccinium macrocarpon HOM05D002762 ORTHO05D008831 1.6e-176 623.6 651 49.5
Haze_01004 Corylus avellana HOM05D002762 ORTHO05D008831 2.7e-176 622.9 677 48.0
HPP92_018399 Vanilla planifolia HOM05D002762 ORTHO05D008831 4.6e-176 622.1 631 50.7
AT2G20790 Arabidopsis thaliana HOM05D002762 ORTHO05D008831 1.8e-175 620.2 623 52.2
CARHR111460 Cardamine hirsuta HOM05D002762 ORTHO05D008831 1.8e-175 620.2 621 52.2
Sabra10G0012300 Salix brachista HOM05D002762 ORTHO05D008831 3.0e-175 619.4 617 51.1
EL10Ac8g18297 Beta vulgaris HOM05D002762 ORTHO05D008831 1.1e-174 617.5 630 50.3
Solyc01g080360.3 Solanum lycopersicum HOM05D002762 ORTHO05D008831 4.3e-174 615.5 630 51.1
Hund09035 Selenicereus undatus HOM05D002762 ORTHO05D008831 7.4e-174 614.8 637 49.8
AagrBONN_evm.TU.Sc2ySwM_368.1411 Anthoceros agrestis HOM05D002762 ORTHO05D008831 9.6e-174 614.4 598 55.0
Sopen01g032170 Solanum pennellii HOM05D002762 ORTHO05D008831 9.6e-174 614.4 630 50.3
DCAR_030580 Daucus carota HOM05D002762 ORTHO05D008831 1.6e-173 613.6 628 50.3
AL3G53900 Arabidopsis lyrata HOM05D002762 ORTHO05D008831 2.1e-173 613.2 624 51.1
Sp6g27240 Schrenkiella parvula HOM05D002762 ORTHO05D008831 1.1e-172 610.9 633 50.9
A03p08030 Brassica napus HOM05D002762 ORTHO05D008831 1.4e-172 610.5 626 51.4
BraA03t10129Z Brassica rapa HOM05D002762 ORTHO05D008831 1.4e-172 610.5 626 51.4
CSS0031724 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 1.8e-172 610.1 614 50.8
COL.COLO4_13977 Corchorus olitorius HOM05D002762 ORTHO05D008831 1.8e-172 610.1 632 49.8
Oeu035631.1 Olea europaea HOM05D002762 ORTHO05D008831 3.1e-172 609.4 594 53.2
C03p09290 Brassica napus HOM05D002762 ORTHO05D008831 9.0e-172 607.8 624 51.3
CAN.G889.17 Capsicum annuum HOM05D002762 ORTHO05D008831 1.2e-171 607.4 631 50.1
AUR62033230 Chenopodium quinoa HOM05D002762 ORTHO05D008831 2.0e-171 606.7 633 49.0
Sc19g0004720 Simmondsia chinensis HOM05D002762 ORTHO05D008831 2.0e-171 606.7 635 49.3
BolC3t13425H Brassica oleracea HOM05D002762 ORTHO05D008831 2.6e-171 606.3 624 51.4
Pp3c2_12250 Physcomitrium patens HOM05D002762 ORTHO05D008831 2.6e-171 606.3 617 52.7
Nitab4.5_0000894g0020 Nicotiana tabacum HOM05D002762 ORTHO05D008831 3.4e-171 605.9 610 51.5
Eucgr.F00974 Eucalyptus grandis HOM05D002762 ORTHO05D008831 5.8e-171 605.1 604 51.5
Thhalv10003762m.g Eutrema salsugineum HOM05D002762 ORTHO05D008831 5.8e-171 605.1 624 51.4
Sed0011257 Sechium edule HOM05D002762 ORTHO05D008831 4.9e-170 602.1 636 47.8
Aa31LG8G17700 Aethionema arabicum HOM05D002762 ORTHO05D008831 4.2e-169 599.0 631 49.9
Lsat_1_v5_gn_6_14820 Lactuca sativa HOM05D002762 ORTHO05D008831 4.2e-169 599.0 627 51.0
HanXRQChr07g0192681 Helianthus annuus HOM05D002762 ORTHO05D008831 1.2e-168 597.4 638 50.3
CiPaw.01G157200 Carya illinoinensis HOM05D002762 ORTHO05D008831 3.3e-166 589.3 580 52.6
CDE11G0719 Ceratophyllum demersum HOM05D002762 ORTHO05D008831 3.3e-166 589.3 635 48.7
ECA233G1162 Erigeron canadensis HOM05D002762 ORTHO05D008831 1.0e-162 577.8 623 48.8
Zm00001eb410820 Zea mays HOM05D002762 ORTHO05D008831 1.0e-162 577.8 633 47.1
Lj6A665G69 Lonicera japonica HOM05D002762 ORTHO05D008831 4.2e-161 572.4 671 47.1
AUR62021313 Chenopodium quinoa HOM05D002762 ORTHO05D008831 5.5e-161 572.0 598 49.0
Nitab4.5_0000059g0110 Nicotiana tabacum HOM05D002762 ORTHO05D008831 1.5e-158 563.9 575 51.3
SEGI_30175 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 1.5e-158 563.9 490 57.1
Peaxi162Scf00095g00610 Petunia axillaris HOM05D002762 ORTHO05D008831 2.5e-158 563.1 589 49.9
Carub.0003s3536 Capsella rubella HOM05D002762 ORTHO05D008831 1.3e-157 560.8 564 51.1
Sed0022901 Sechium edule HOM05D002762 ORTHO05D008831 1.3e-157 560.8 636 46.1
unitig_899.g14405 Utricularia gibba HOM05D002762 ORTHO05D008831 4.5e-155 552.4 602 46.8
Prupe.1G147800 Prunus persica HOM05D002762 ORTHO05D008831 2.0e-142 510.4 632 43.4
Dinv38356 Davidia involucrata HOM05D002762 ORTHO05D008831 4.5e-131 472.6 447 54.1
MELO3C021387.2 Cucumis melo HOM05D002762 ORTHO05D008831 1.0e-127 461.5 456 49.1
Ah.09g229990 Amaranthus hybridus HOM05D002762 ORTHO05D008831 6.5e-122 442.2 450 48.2
CBR_g19730 Chara braunii HOM05D002762 ORTHO05D008831 2.4e-116 423.7 769 35.9
SEGI_25743 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 7.0e-116 422.2 403 52.9
Nn1g08335 Nelumbo nucifera HOM05D002762 ORTHO05D008831 8.6e-114 415.2 423 50.8
Cfa015544 Carpinus fangiana HOM05D002762 ORTHO05D008831 1.2e-112 411.4 406 53.2
Eucgr.B01191 Eucalyptus grandis HOM05D002762 ORTHO05D008831 2.1e-91 340.9 424 43.9
Cpa.g.sc16.61 Carica papaya HOM05D002762 ORTHO05D008831 4.0e-71 273.5 612 31.5
MD13G1179200 Malus domestica HOM05D002762 ORTHO05D008831 4.2e-68 263.5 448 37.7
Actinidia23461 Actinidia chinensis HOM05D002762 ORTHO05D008831 1.1e-65 255.4 274 52.2
BcaB01g05249 Brassica carinata HOM05D002762 ORTHO05D008831 3.7e-40 170.6 172 52.3
Os12g0528300 Oryza sativa ssp. japonica HOM05D002762 ORTHO05D008831 5.3e-39 166.8 168 51.2
SEGI_28752 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 4.1e-31 140.6 147 48.3
MD12G1098800 Malus domestica HOM05D002762 ORTHO05D008831 3.7e-24 117.5 220 32.7
Actinidia23460 Actinidia chinensis HOM05D002762 ORTHO05D030920 1.4e-18 99.0 69 58.0
MD12G1098700 Malus domestica HOM05D002762 ORTHO05D008831 3.0e-18 97.8 163 35.6
VMungo1215G0498 Vigna mungo HOM05D002762 ORTHO05D008831 1.0e-13 82.8 79 54.4
FAN17G1900 Fragaria x ananassa HOM05D002762 ORTHO05D030920 1.4e-10 72.4 77 46.8
COL.COLO4_28661 Corchorus olitorius HOM05D002762 ORTHO05D008831 3.5e-06 57.8 87 39.1


User provided reference genes

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