Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO115G0125 Selaginella moellendorffii HOM05D004578 ORTHO05D005529 4.8e-249 864.0 421 100.0
SEGI_31206 Sequoiadendron giganteum HOM05D004578 ORTHO05D005529 1.5e-125 453.8 413 52.3
SEGI_11947 Sequoiadendron giganteum HOM05D004578 ORTHO05D005529 2.2e-121 439.9 413 51.1
Pp3c9_3640 Physcomitrium patens HOM05D004578 ORTHO05D005529 9.3e-120 434.5 418 50.7
Mapoly0152s0014 Marchantia polymorpha HOM05D004578 ORTHO05D005529 1.9e-117 426.8 407 49.4
AagrBONN_evm.TU.Sc2ySwM_368.3376 Anthoceros agrestis HOM05D004578 ORTHO05D005529 2.0e-109 400.2 396 49.2
TAR625G0669 Trochodendron aralioides HOM05D004578 ORTHO05D005529 3.1e-107 392.9 405 46.7
MBI16_g05839_MAGBIO Magnolia biondii HOM05D004578 ORTHO05D005529 5.3e-107 392.1 402 48.0
Nn8g40733 Nelumbo nucifera HOM05D004578 ORTHO05D005529 3.8e-105 386.0 408 46.8
Manes.16G134500 Manihot esculenta HOM05D004578 ORTHO05D005529 2.1e-103 380.2 406 47.8
Duzib168G2341 Durio zibethinus HOM05D004578 ORTHO05D005529 3.9e-102 375.9 414 44.7
MSTRG.25795 Avicennia marina HOM05D004578 ORTHO05D005529 6.7e-102 375.2 403 46.2
Nitab4.5_0000555g0200 Nicotiana tabacum HOM05D004578 ORTHO05D005529 1.1e-101 374.4 415 45.1
Sp4g03570 Schrenkiella parvula HOM05D004578 ORTHO05D005529 1.1e-101 374.4 408 47.3
COL.COLO4_19019 Corchorus olitorius HOM05D004578 ORTHO05D005529 2.0e-101 373.6 415 44.1
vmacro18918 Vaccinium macrocarpon HOM05D004578 ORTHO05D005529 2.0e-101 373.6 405 47.2
ATR0626G173 Amborella trichopoda HOM05D004578 ORTHO05D005529 2.6e-101 373.2 403 45.4
Cc08_g06480 Coffea canephora HOM05D004578 ORTHO05D005529 2.6e-101 373.2 404 46.0
Thhalv10000150m.g Eutrema salsugineum HOM05D004578 ORTHO05D005529 2.6e-101 373.2 407 46.9
Manes.03G004800 Manihot esculenta HOM05D004578 ORTHO05D005529 2.6e-101 373.2 407 46.4
Potri.018G008700 Populus trichocarpa HOM05D004578 ORTHO05D005529 2.6e-101 373.2 403 46.7
Peaxi162Scf00045g01734 Petunia axillaris HOM05D004578 ORTHO05D005529 4.4e-101 372.5 415 44.3
CAN.G673.19 Capsicum annuum HOM05D004578 ORTHO05D005529 9.7e-101 371.3 412 45.4
Migut.A00428 Erythranthe guttata HOM05D004578 ORTHO05D005529 9.7e-101 371.3 403 45.2
CsaV3_3G047160 Cucumis sativus L. HOM05D004578 ORTHO05D005529 1.3e-100 370.9 412 44.4
Sabra06G0211200 Salix brachista HOM05D004578 ORTHO05D005529 1.3e-100 370.9 405 45.9
PSO170G4894 Papaver somniferum HOM05D004578 ORTHO05D005529 2.8e-100 369.8 409 43.8
Thecc.09G008600 Theobroma cacao HOM05D004578 ORTHO05D005529 2.8e-100 369.8 415 43.9
CARHR117360 Cardamine hirsuta HOM05D004578 ORTHO05D005529 3.7e-100 369.4 411 46.5
Ciclev10008459m.g Citrus clementina HOM05D004578 ORTHO05D005529 3.7e-100 369.4 403 44.4
BcaC02g08438 Brassica carinata HOM05D004578 ORTHO05D005529 4.8e-100 369.0 406 46.3
A04p18950 Brassica napus HOM05D004578 ORTHO05D005529 4.8e-100 369.0 406 46.3
C04p54190 Brassica napus HOM05D004578 ORTHO05D005529 4.8e-100 369.0 406 46.3
BolC4t26970H Brassica oleracea HOM05D004578 ORTHO05D005529 6.3e-100 368.6 406 46.3
Dinv04517 Davidia involucrata HOM05D004578 ORTHO05D005529 6.3e-100 368.6 408 46.3
HanXRQChr15g0466441 Helianthus annuus HOM05D004578 ORTHO05D005529 6.3e-100 368.6 416 44.5
AL4G15160 Arabidopsis lyrata HOM05D004578 ORTHO05D005529 8.2e-100 368.2 415 46.0
BraA04t17495Z Brassica rapa HOM05D004578 ORTHO05D005529 8.2e-100 368.2 406 46.3
TWI32G0020 Tripterygium wilfordii HOM05D004578 ORTHO05D005529 8.2e-100 368.2 405 45.9
ClCG05G026450 Citrullus lanatus HOM05D004578 ORTHO05D005529 1.1e-99 367.9 407 44.5
EL10Ac2g02417 Beta vulgaris HOM05D004578 ORTHO05D005529 1.4e-99 367.5 421 44.9
Gorai.010G121600 Gossypium raimondii HOM05D004578 ORTHO05D005529 1.8e-99 367.1 409 44.5
AT2G24580 Arabidopsis thaliana HOM05D004578 ORTHO05D005529 2.4e-99 366.7 416 45.4
Sopen08g002370 Solanum pennellii HOM05D004578 ORTHO05D005529 2.4e-99 366.7 405 43.7
BcaB06g27986 Brassica carinata HOM05D004578 ORTHO05D005529 3.1e-99 366.3 406 46.1
Cpa.g.sc23.31 Carica papaya HOM05D004578 ORTHO05D005529 7.0e-99 365.2 403 44.7
THA.LOC104819936 Tarenaya hassleriana HOM05D004578 ORTHO05D005529 7.0e-99 365.2 408 45.3
Hund13109 Selenicereus undatus HOM05D004578 ORTHO05D005529 9.1e-99 364.8 406 45.8
Carub.0004s0400 Capsella rubella HOM05D004578 ORTHO05D005529 1.2e-98 364.4 407 45.9
Ciclev10008463m.g Citrus clementina HOM05D004578 ORTHO05D005529 1.2e-98 364.4 405 44.4
PSO063G3790 Papaver somniferum HOM05D004578 ORTHO05D005529 2.0e-98 363.6 411 42.6
Aqoxy7G02848 Aquilegia oxysepala HOM05D004578 ORTHO05D005529 2.6e-98 363.2 404 45.3
CSS0030954 Camellia sinensis var. sinensis HOM05D004578 ORTHO05D005529 3.5e-98 362.8 405 44.4
DCAR_000687 Daucus carota HOM05D004578 ORTHO05D005529 3.5e-98 362.8 406 46.6
Solyc08g006430.4 Solanum lycopersicum HOM05D004578 ORTHO05D005529 4.5e-98 362.5 411 43.3
PGSC0003DMG400026320 Solanum tuberosum HOM05D004578 ORTHO05D005529 4.5e-98 362.5 405 43.2
Gohir.D06G107000 Gossypium hirsutum HOM05D004578 ORTHO05D005529 5.9e-98 362.1 409 44.0
Sabra18G0013200 Salix brachista HOM05D004578 ORTHO05D005529 5.9e-98 362.1 403 45.2
Sabra18G0015700 Salix brachista HOM05D004578 ORTHO05D005529 5.9e-98 362.1 403 45.2
Eucgr.C04012 Eucalyptus grandis HOM05D004578 ORTHO05D005529 7.7e-98 361.7 404 45.8
FAN15G2443 Fragaria x ananassa HOM05D004578 ORTHO05D005529 1.7e-97 360.5 402 44.8
Actinidia06432 Actinidia chinensis HOM05D004578 ORTHO05D005529 2.9e-97 359.8 412 44.9
Cfa013287 Carpinus fangiana HOM05D004578 ORTHO05D005529 3.8e-97 359.4 403 45.4
Gohir.A06G104800 Gossypium hirsutum HOM05D004578 ORTHO05D005529 5.0e-97 359.0 404 43.6
MBI13_g34048_MAGBIO Magnolia biondii HOM05D004578 ORTHO05D005529 1.1e-96 357.8 400 44.2
CANSAT25G1430 Cannabis sativa HOM05D004578 ORTHO05D005529 1.9e-96 357.1 403 42.2
Haze_21761 Corylus avellana HOM05D004578 ORTHO05D005529 1.9e-96 357.1 404 45.3
Nitab4.5_0004131g0050 Nicotiana tabacum HOM05D004578 ORTHO05D005529 2.5e-96 356.7 396 44.4
Potri.006G272800 Populus trichocarpa HOM05D004578 ORTHO05D005529 2.5e-96 356.7 400 45.5
Aa31sc160G30 Aethionema arabicum HOM05D004578 ORTHO05D005529 3.2e-96 356.3 404 46.3
AUR62020290 Chenopodium quinoa HOM05D004578 ORTHO05D005529 4.2e-96 355.9 407 43.7
AUR62037713 Chenopodium quinoa HOM05D004578 ORTHO05D005529 4.2e-96 355.9 406 44.3
FAN20G1103 Fragaria x ananassa HOM05D004578 ORTHO05D005529 4.2e-96 355.9 404 44.8
CiPaw.07G211300 Carya illinoinensis HOM05D004578 ORTHO05D005529 1.6e-95 354.0 408 43.6
Cc00_g13120 Coffea canephora HOM05D004578 ORTHO05D005529 1.6e-95 354.0 411 42.6
Sed0023873 Sechium edule HOM05D004578 ORTHO05D005529 1.6e-95 354.0 411 44.5
Aa31sc715G30 Aethionema arabicum HOM05D004578 ORTHO05D005529 3.6e-95 352.8 412 44.7
FAN27G0985 Fragaria x ananassa HOM05D004578 ORTHO05D005529 3.6e-95 352.8 404 44.3
Lj7P748T39 Lonicera japonica HOM05D004578 ORTHO05D005529 3.6e-95 352.8 402 44.8
SGA_v2.0_scaffold193G40672 Striga asiatica HOM05D004578 ORTHO05D005529 3.6e-95 352.8 404 43.6
Atru.chr7.2661 Acer truncatum HOM05D004578 ORTHO05D005529 6.1e-95 352.1 407 44.5
MELO3C003620.2 Cucumis melo HOM05D004578 ORTHO05D005529 1.0e-94 351.3 408 42.9
TAR383G0560 Trochodendron aralioides HOM05D004578 ORTHO05D005529 2.3e-94 350.1 392 44.1
CDE02G4459 Ceratophyllum demersum HOM05D004578 ORTHO05D005529 4.0e-94 349.4 394 46.2
FvH4_2g36660 Fragaria vesca HOM05D004578 ORTHO05D005529 4.0e-94 349.4 404 44.3
TAR383G1032 Trochodendron aralioides HOM05D004578 ORTHO05D005529 4.0e-94 349.4 392 44.1
QL12p025440 Quercus lobata HOM05D004578 ORTHO05D005529 5.2e-94 349.0 405 42.5
MD08G1126500 Malus domestica HOM05D004578 ORTHO05D005529 6.7e-94 348.6 406 44.1
Lsat_1_v5_gn_9_4341 Lactuca sativa HOM05D004578 ORTHO05D005529 1.5e-93 347.4 418 42.6
Psat5g024080 Pisum sativum HOM05D004578 ORTHO05D005529 2.0e-93 347.1 393 42.5
Ah.13g067790 Amaranthus hybridus HOM05D004578 ORTHO05D005529 2.6e-93 346.7 403 44.4
MD15G1106400 Malus domestica HOM05D004578 ORTHO05D005529 2.6e-93 346.7 405 43.5
Lj1g0024454 Lotus japonicus HOM05D004578 ORTHO05D005529 3.3e-93 346.3 393 42.7
PGR044G1507 Punica granatum HOM05D004578 ORTHO05D005529 4.4e-93 345.9 405 42.5
Cfa013284 Carpinus fangiana HOM05D004578 ORTHO05D005529 7.5e-93 345.1 403 43.4
ECA247G3559 Erigeron canadensis HOM05D004578 ORTHO05D005529 9.7e-93 344.7 417 43.9
SalBow4G0906 Salvia bowleyana HOM05D004578 ORTHO05D005529 2.2e-92 343.6 405 44.0
Rhsim10G0084800 Rhododendron simsii HOM05D004578 ORTHO05D005529 2.8e-92 343.2 398 43.7
Prupe.1G458600 Prunus persica HOM05D004578 ORTHO05D005529 3.7e-92 342.8 406 43.6
arahy.Tifrunner.gnm1.ann1.M0AD1K Arachis hypogaea HOM05D004578 ORTHO05D005529 1.4e-91 340.9 397 43.6
Medtr3g109010 Medicago truncatula HOM05D004578 ORTHO05D005529 1.4e-91 340.9 393 43.3
CiPaw.08G020700 Carya illinoinensis HOM05D004578 ORTHO05D005529 3.1e-91 339.7 405 43.7
Medtr3g108990 Medicago truncatula HOM05D004578 ORTHO05D005529 7.0e-91 338.6 398 42.0
TPR.G12360 Trifolium pratense HOM05D004578 ORTHO05D005529 7.0e-91 338.6 396 41.4
unitig_32.g11237 Utricularia gibba HOM05D004578 ORTHO05D005529 1.2e-90 337.8 396 43.2
Eucgr.C04014 Eucalyptus grandis HOM05D004578 ORTHO05D005529 3.5e-90 336.3 395 43.0
Ca_15651_v3 Cicer arietinum L. HOM05D004578 ORTHO05D005529 4.5e-90 335.9 392 41.6
Ca_15659_v3 Cicer arietinum L. HOM05D004578 ORTHO05D005529 4.5e-90 335.9 392 41.6
arahy.Tifrunner.gnm1.ann1.W2ETIH Arachis hypogaea HOM05D004578 ORTHO05D005529 5.9e-90 335.5 397 43.8
Glyma.04G076300 Glycine max HOM05D004578 ORTHO05D005529 7.7e-90 335.1 396 42.9
Eucgr.C04016 Eucalyptus grandis HOM05D004578 ORTHO05D005529 1.3e-89 334.3 405 42.0
Prupe.1G458900 Prunus persica HOM05D004578 ORTHO05D005529 2.9e-89 333.2 409 41.8
Phvul.009G102000 Phaseolus vulgaris HOM05D004578 ORTHO05D005529 1.1e-88 331.3 394 41.4
QL12p025516 Quercus lobata HOM05D004578 ORTHO05D005529 1.1e-88 331.3 401 40.6
BcaC02g08437 Brassica carinata HOM05D004578 ORTHO05D005529 2.5e-88 330.1 405 43.5
Sc07g0007360 Simmondsia chinensis HOM05D004578 ORTHO05D005529 2.5e-88 330.1 406 41.6
VMungo1309G1783 Vigna mungo HOM05D004578 ORTHO05D005529 3.2e-88 329.7 394 40.9
HanXRQChr10g0282951 Helianthus annuus HOM05D004578 ORTHO05D005529 5.5e-88 328.9 416 42.1
TPR.G12429 Trifolium pratense HOM05D004578 ORTHO05D005529 4.7e-87 325.9 398 41.7
Zm00001eb317190 Zea mays HOM05D004578 ORTHO05D005529 3.4e-85 319.7 408 42.9
RcHm_v2.0_Chr6g0305131 Rosa chinensis HOM05D004578 ORTHO05D005529 4.4e-85 319.3 411 41.4
Ca_15652_v3 Cicer arietinum L. HOM05D004578 ORTHO05D005529 7.5e-85 318.5 382 41.4
Ca_15660_v3 Cicer arietinum L. HOM05D004578 ORTHO05D005529 7.5e-85 318.5 382 41.4
Cfa013283 Carpinus fangiana HOM05D004578 ORTHO05D005529 1.7e-84 317.4 395 40.8
Os09g0498500 Oryza sativa ssp. japonica HOM05D004578 ORTHO05D005529 2.8e-84 316.6 407 44.0
Actinidia22261 Actinidia chinensis HOM05D004578 ORTHO05D005529 1.6e-82 310.8 412 40.8
Zm00001eb127180 Zea mays HOM05D004578 ORTHO05D005529 5.2e-78 295.8 406 42.1
Os12g0543600 Oryza sativa ssp. japonica HOM05D004578 ORTHO05D005529 3.4e-77 293.1 383 42.3
Os01g0316100 Oryza sativa ssp. japonica HOM05D004578 ORTHO05D005529 5.7e-77 292.4 411 41.4
PRCOL_00000645 Prasinoderma coloniale HOM05D004578 ORTHO05D005529 8.3e-76 288.5 443 37.7
Lalb_Chr11g0064181 Lupinus albus HOM05D004578 ORTHO05D005529 1.2e-74 284.6 393 38.4
Prupe.1G458800 Prunus persica HOM05D004578 ORTHO05D005529 6.6e-73 278.9 408 39.0
Zm00001eb340420 Zea mays HOM05D004578 ORTHO05D005529 9.5e-72 275.0 399 40.4
Zm00001eb140430 Zea mays HOM05D004578 ORTHO05D005529 4.7e-71 272.7 405 39.3
HPP92_017393 Vanilla planifolia HOM05D004578 ORTHO05D005529 3.5e-58 229.9 399 36.3
Psat5g025320 Pisum sativum HOM05D004578 ORTHO05D005529 4.9e-52 209.5 256 41.8
Gohir.D06G106866 Gossypium hirsutum HOM05D004578 ORTHO05D005529 4.1e-51 206.5 362 33.4
unitig_32.g11239 Utricularia gibba HOM05D004578 ORTHO05D005529 4.3e-48 196.4 187 49.2
Gorai.010G121400 Gossypium raimondii HOM05D004578 ORTHO05D005529 2.6e-45 187.2 302 35.4
Oeu008773.1 Olea europaea HOM05D004578 ORTHO05D005529 6.4e-44 182.6 403 30.5
Hma1.2p1_1588F.1_g292320 Hydrangea macrophylla HOM05D004578 ORTHO05D005529 1.4e-43 181.4 401 32.7
Oeu018556.1 Olea europaea HOM05D004578 ORTHO05D005529 1.7e-41 174.5 408 29.2
GSVIVG01033177001 Vitis vinifera HOM05D004578 ORTHO05D005529 1.8e-38 164.5 403 28.5
Ca_28680_v3 Cicer arietinum L. HOM05D004578 ORTHO05D005529 1.6e-34 151.4 401 27.9
Lalb_Chr23g0269171 Lupinus albus HOM05D004578 ORTHO05D005529 4.8e-31 139.8 159 42.8
Cfa013285 Carpinus fangiana HOM05D004578 ORTHO05D005529 1.3e-28 131.7 226 35.0
HanXRQChr10g0282961 Helianthus annuus HOM05D004578 ORTHO05D005529 3.5e-26 123.6 157 43.9
unitig_32.g11238 Utricularia gibba HOM05D004578 ORTHO05D005529 3.7e-23 113.6 107 50.5
Cre12.g493500 Chlamydomonas reinhardtii HOM05D004578 ORTHO05D005529 1.9e-19 101.3 408 26.5
Cc08_g06580 Coffea canephora HOM05D004578 ORTHO05D005529 1.2e-18 98.6 101 42.6
TPR.G12332 Trifolium pratense HOM05D004578 ORTHO05D005529 2.3e-17 94.4 78 53.8
Cre07.g312050 Chlamydomonas reinhardtii HOM05D004578 ORTHO05D139866 1.9e-08 64.7 241 24.5
Psat2g052560 Pisum sativum HOM05D004790 ORTHO05D005678 6.3e-07 59.7 75 40.0
Actinidia22262 Actinidia chinensis HOM05D004578 ORTHO05D005529 1.1e-06 58.9 325 21.5


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