Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO111G0094 Selaginella moellendorffii HOM05D005832 ORTHO05D007117 8.5e-50 200.7 158 100.0
Pp3c23_22190 Physcomitrium patens HOM05D005832 ORTHO05D007117 8.3e-37 157.5 156 85.9
COL.COLO4_16805 Corchorus olitorius HOM05D005832 ORTHO05D007117 2.9e-34 149.1 156 82.7
SEGI_24850 Sequoiadendron giganteum HOM05D005832 ORTHO05D007117 2.9e-34 149.1 158 81.6
Lj1g0002080 Lotus japonicus HOM05D005832 ORTHO05D007117 3.8e-34 148.7 156 82.7
Lalb_Chr08g0240071 Lupinus albus HOM05D005832 ORTHO05D007117 5.0e-34 148.3 156 84.0
AUR62035562 Chenopodium quinoa HOM05D005832 ORTHO05D007117 6.6e-34 147.9 156 82.7
Medtr3g491890 Medicago truncatula HOM05D005832 ORTHO05D007117 6.6e-34 147.9 156 82.7
Peaxi162Scf00740g00233 Petunia axillaris HOM05D005832 ORTHO05D007117 8.6e-34 147.5 156 82.7
PGSC0003DMG400018522 Solanum tuberosum HOM05D005832 ORTHO05D007117 8.6e-34 147.5 156 81.4
Lsat_1_v5_gn_9_63281 Lactuca sativa HOM05D005832 ORTHO05D007117 1.1e-33 147.1 153 83.0
Actinidia06134 Actinidia chinensis HOM05D005832 ORTHO05D007117 1.5e-33 146.7 156 80.8
arahy.Tifrunner.gnm1.ann1.082NQD Arachis hypogaea HOM05D005832 ORTHO05D007117 1.5e-33 146.7 156 82.7
arahy.Tifrunner.gnm1.ann1.26JPZN Arachis hypogaea HOM05D005832 ORTHO05D007117 1.5e-33 146.7 156 82.7
AUR62006065 Chenopodium quinoa HOM05D005832 ORTHO05D007117 1.5e-33 146.7 156 82.1
Dinv29254 Davidia involucrata HOM05D005832 ORTHO05D007117 1.5e-33 146.7 156 81.4
Glyma.04G233500 Glycine max HOM05D005832 ORTHO05D007117 1.5e-33 146.7 156 82.7
MELO3C019377.2 Cucumis melo HOM05D005832 ORTHO05D007117 1.9e-33 146.4 156 81.4
Oeu010700.1 Olea europaea HOM05D005832 ORTHO05D007117 1.9e-33 146.4 156 81.4
Solyc03g082890.3 Solanum lycopersicum HOM05D005832 ORTHO05D007117 1.9e-33 146.4 156 81.4
Sopen03g022710 Solanum pennellii HOM05D005832 ORTHO05D007117 1.9e-33 146.4 156 81.4
MSTRG.8527 Avicennia marina HOM05D005832 ORTHO05D007117 2.5e-33 146.0 156 82.1
CDE09G0779 Ceratophyllum demersum HOM05D005832 ORTHO05D007117 2.5e-33 146.0 156 80.8
CAN.G481.39 Capsicum annuum HOM05D005832 ORTHO05D007117 3.3e-33 145.6 156 80.8
CsaV3_3G019700 Cucumis sativus L. HOM05D005832 ORTHO05D007117 3.3e-33 145.6 156 81.4
Nn3g18931 Nelumbo nucifera HOM05D005832 ORTHO05D007117 3.3e-33 145.6 156 82.1
SalBow2G0471 Salvia bowleyana HOM05D005832 ORTHO05D007117 3.3e-33 145.6 156 82.7
ATR0680G157 Amborella trichopoda HOM05D005832 ORTHO05D007117 4.3e-33 145.2 156 80.1
TPR.G33655 Trifolium pratense HOM05D005832 ORTHO05D007117 4.3e-33 145.2 156 82.1
TAR375G0053 Trochodendron aralioides HOM05D005832 ORTHO05D007117 5.6e-33 144.8 156 82.1
Atru.chr12.2262 Acer truncatum HOM05D005832 ORTHO05D007117 7.3e-33 144.4 156 81.4
SGA_v2.0_scaffold125G33711 Striga asiatica HOM05D005832 ORTHO05D007117 7.3e-33 144.4 156 79.5
ClCG05G009090 Citrullus lanatus HOM05D005832 ORTHO05D007117 9.5e-33 144.1 156 80.1
Psat5g075600 Pisum sativum HOM05D005832 ORTHO05D007117 9.5e-33 144.1 156 81.4
Sed0026931 Sechium edule HOM05D005832 ORTHO05D007117 9.5e-33 144.1 156 79.5
Gohir.D12G019400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.2e-32 143.7 156 80.8
Gorai.008G019700 Gossypium raimondii HOM05D005832 ORTHO05D007117 1.2e-32 143.7 156 80.8
Os10g0502000 Oryza sativa ssp. japonica HOM05D005832 ORTHO05D007117 1.2e-32 143.7 156 79.5
AagrBONN_evm.TU.Sc2ySwM_228.2510 Anthoceros agrestis HOM05D005832 ORTHO05D007117 1.6e-32 143.3 78 87.2
Ciclev10021983m.g Citrus clementina HOM05D005832 ORTHO05D007117 1.6e-32 143.3 156 81.4
Gohir.A09G185500 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.6e-32 143.3 156 80.8
TWI39G1154 Tripterygium wilfordii HOM05D005832 ORTHO05D007117 1.6e-32 143.3 156 81.4
HPP92_013004 Vanilla planifolia HOM05D005832 ORTHO05D007117 2.1e-32 142.9 156 80.1
FAN03G0720 Fragaria x ananassa HOM05D005832 ORTHO05D007117 2.8e-32 142.5 156 80.1
MBI18_g01156_MAGBIO Magnolia biondii HOM05D005832 ORTHO05D007117 3.6e-32 142.1 156 79.5
unitig_578.g16672 Utricularia gibba HOM05D005832 ORTHO05D007117 3.6e-32 142.1 156 80.8
Zm00001eb220820 Zea mays HOM05D005832 ORTHO05D007117 3.6e-32 142.1 156 79.5
Cc02_g01260 Coffea canephora HOM05D005832 ORTHO05D007117 4.7e-32 141.7 156 80.1
FvH4_7g32120 Fragaria vesca HOM05D005832 ORTHO05D007117 6.1e-32 141.4 156 80.1
FAN01G1435 Fragaria x ananassa HOM05D005832 ORTHO05D007117 6.1e-32 141.4 156 80.1
FAN06G2446 Fragaria x ananassa HOM05D005832 ORTHO05D007117 6.1e-32 141.4 156 80.1
Manes.01G039700 Manihot esculenta HOM05D005832 ORTHO05D007117 6.1e-32 141.4 156 79.5
Nitab4.5_0007100g0060 Nicotiana tabacum HOM05D005832 ORTHO05D007117 6.1e-32 141.4 156 80.1
Phvul.009G050400 Phaseolus vulgaris HOM05D005832 ORTHO05D007117 6.1e-32 141.4 156 79.5
Rhsim09G0206900 Rhododendron simsii HOM05D005832 ORTHO05D007117 6.1e-32 141.4 156 79.5
Prupe.2G314300 Prunus persica HOM05D005832 ORTHO05D007117 8.0e-32 141.0 156 80.1
RcHm_v2.0_Chr1g0381721 Rosa chinensis HOM05D005832 ORTHO05D007117 8.0e-32 141.0 156 80.1
Glyma.06G131300 Glycine max HOM05D005832 ORTHO05D007117 1.0e-31 140.6 156 81.4
HanXRQChr08g0225151 Helianthus annuus HOM05D005832 ORTHO05D007117 1.0e-31 140.6 158 79.1
PSO170G4678 Papaver somniferum HOM05D005832 ORTHO05D007117 1.0e-31 140.6 156 80.8
Thecc.03G202400 Theobroma cacao HOM05D005832 ORTHO05D007117 1.0e-31 140.6 156 80.1
vmacro10134 Vaccinium macrocarpon HOM05D005832 ORTHO05D007117 1.4e-31 140.2 156 79.5
CiPaw.06G044600 Carya illinoinensis HOM05D005832 ORTHO05D007117 1.8e-31 139.8 156 78.8
Ca_16726_v3 Cicer arietinum L. HOM05D005832 ORTHO05D007117 1.8e-31 139.8 156 79.5
Migut.F01014 Erythranthe guttata HOM05D005832 ORTHO05D007117 1.8e-31 139.8 78 84.6
Potri.012G018100 Populus trichocarpa HOM05D005832 ORTHO05D007117 1.8e-31 139.8 156 78.8
Sabra12G0014400 Salix brachista HOM05D005832 ORTHO05D007117 1.8e-31 139.8 156 78.8
DCAR_020339 Daucus carota HOM05D005832 ORTHO05D007117 2.3e-31 139.4 157 80.3
PSO063G3297 Papaver somniferum HOM05D005832 ORTHO05D007117 4.0e-31 138.7 156 80.1
FAN10G0265 Fragaria x ananassa HOM05D005832 ORTHO05D007117 5.2e-31 138.3 156 79.5
FAN10G0314 Fragaria x ananassa HOM05D005832 ORTHO05D007117 5.2e-31 138.3 156 79.5
GSVIVG01038586001 Vitis vinifera HOM05D005832 ORTHO05D007117 5.2e-31 138.3 156 77.6
MD07G1294700 Malus domestica HOM05D005832 ORTHO05D007117 8.9e-31 137.5 156 78.8
PGR142G2159 Punica granatum HOM05D005832 ORTHO05D007117 1.2e-30 137.1 156 78.8
Cfa016207 Carpinus fangiana HOM05D005832 ORTHO05D007117 1.5e-30 136.7 156 78.2
ECA233G1427 Erigeron canadensis HOM05D005832 ORTHO05D007117 1.5e-30 136.7 158 77.2
Gorai.007G219400 Gossypium raimondii HOM05D005832 ORTHO05D007117 1.5e-30 136.7 156 77.6
Gorai.013G219100 Gossypium raimondii HOM05D005832 ORTHO05D007117 1.5e-30 136.7 156 46.8
VMungo1309G1177 Vigna mungo HOM05D005832 ORTHO05D007117 1.5e-30 136.7 156 78.8
Lj3A899T66 Lonicera japonica HOM05D005832 ORTHO05D007117 2.0e-30 136.3 78 83.3
QL09p007826 Quercus lobata HOM05D005832 ORTHO05D007117 2.0e-30 136.3 156 78.2
Duzib084G1042 Durio zibethinus HOM05D005832 ORTHO05D007117 2.6e-30 136.0 156 78.8
Haze_00239 Corylus avellana HOM05D005832 ORTHO05D007117 3.4e-30 135.6 156 77.6
Haze_00242 Corylus avellana HOM05D005832 ORTHO05D007117 3.4e-30 135.6 156 77.6
Mapoly0014s0126 Marchantia polymorpha HOM05D005832 ORTHO05D007117 4.4e-30 135.2 156 76.3
CBR_g40818 Chara braunii HOM05D005832 ORTHO05D007117 5.7e-30 134.8 77 81.8
Oeu055193.1 Olea europaea HOM05D005832 ORTHO05D007117 5.7e-30 134.8 78 82.1
CSS0000669 Camellia sinensis var. sinensis HOM05D005832 ORTHO05D007117 7.5e-30 134.4 78 80.8
CSS0046458 Camellia sinensis var. sinensis HOM05D005832 ORTHO05D007117 7.5e-30 134.4 78 80.8
Eucgr.K00402 Eucalyptus grandis HOM05D005832 ORTHO05D007117 9.8e-30 134.0 78 80.8
Gorai.004G199200 Gossypium raimondii HOM05D005832 ORTHO05D007117 9.8e-30 134.0 156 59.6
Sc25g0000950 Simmondsia chinensis HOM05D005832 ORTHO05D007117 9.8e-30 134.0 156 78.2
Aa31LG3G9660 Aethionema arabicum HOM05D005832 ORTHO05D007117 1.3e-29 133.7 156 78.2
Aqoxy6G02259 Aquilegia oxysepala HOM05D005832 ORTHO05D007117 2.9e-29 132.5 156 77.6
BcaC04g20449 Brassica carinata HOM05D005832 ORTHO05D007117 3.7e-29 132.1 156 78.2
A10p10930 Brassica napus HOM05D005832 ORTHO05D007117 3.7e-29 132.1 156 78.2
C09p43330 Brassica napus HOM05D005832 ORTHO05D007117 3.7e-29 132.1 156 78.2
BolC9t57215H Brassica oleracea HOM05D005832 ORTHO05D007117 3.7e-29 132.1 156 78.2
BraA10t43184Z Brassica rapa HOM05D005832 ORTHO05D007117 3.7e-29 132.1 156 78.2
Sp6g15630 Schrenkiella parvula HOM05D005832 ORTHO05D007117 3.7e-29 132.1 156 78.2
Hma1.2p1_0591F.1_g185170 Hydrangea macrophylla HOM05D005832 ORTHO05D007117 4.9e-29 131.7 156 79.5
Thhalv10014535m.g Eutrema salsugineum HOM05D005832 ORTHO05D007117 8.3e-29 131.0 156 77.6
CANSAT21G0464 Cannabis sativa HOM05D005832 ORTHO05D007117 1.4e-28 130.2 156 78.2
Gorai.008G174000 Gossypium raimondii HOM05D005832 ORTHO05D007117 1.4e-28 130.2 156 76.9
MD01G1223900 Malus domestica HOM05D005832 ORTHO05D007117 2.4e-28 129.4 153 77.8
CARHR266630 Cardamine hirsuta HOM05D005832 ORTHO05D007117 4.1e-28 128.6 156 76.9
Gorai.006G202400 Gossypium raimondii HOM05D005832 ORTHO05D007117 4.1e-28 128.6 153 79.1
BcaB08g35713 Brassica carinata HOM05D005832 ORTHO05D007117 5.4e-28 128.3 156 76.9
Carub.0008s1366 Capsella rubella HOM05D005832 ORTHO05D007117 9.2e-28 127.5 156 76.9
Gorai.004G257600 Gossypium raimondii HOM05D005832 ORTHO05D007117 1.2e-27 127.1 77 79.2
Gohir.A05G409400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.6e-27 126.7 78 76.9
Gohir.A10G001400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.6e-27 126.7 78 76.9
Gohir.D01G203700 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.6e-27 126.7 78 76.9
Gohir.D03G118200 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.6e-27 126.7 78 76.9
AL8G28210 Arabidopsis lyrata HOM05D005832 ORTHO05D007117 2.7e-27 125.9 156 76.3
AT5G53490 Arabidopsis thaliana HOM05D005832 ORTHO05D007117 2.7e-27 125.9 156 76.3
Gohir.D11G247000 Gossypium hirsutum HOM05D005832 ORTHO05D007117 5.9e-27 124.8 78 74.4
Gohir.D02G154600 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.0e-26 124.0 78 74.4
Gohir.D07G112932 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.0e-26 124.0 156 44.9
Gohir.A13G227280 Gossypium hirsutum HOM05D005832 ORTHO05D007117 3.0e-26 122.5 78 74.4
Gohir.D09G180400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 6.6e-26 121.3 144 79.9
Ah.13g070460 Amaranthus hybridus HOM05D005832 ORTHO05D007117 1.1e-25 120.6 71 78.9
EL10Ac3g05248 Beta vulgaris HOM05D005832 ORTHO05D007117 1.1e-25 120.6 156 59.6
THA.LOC104799961 Tarenaya hassleriana HOM05D005832 ORTHO05D007117 8.0e-24 114.4 156 73.1
Gohir.A11G163501 Gossypium hirsutum HOM05D005832 ORTHO05D007117 3.7e-21 105.5 78 67.9
Gohir.D12G161000 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.3e-18 97.1 78 62.8
SEGI_05976 Sequoiadendron giganteum HOM05D005832 ORTHO05D007117 9.5e-17 90.9 64 64.1
Duzib205G0233 Durio zibethinus HOM05D005832 ORTHO05D007117 5.8e-14 81.6 156 65.4
Cre09.g404000 Chlamydomonas reinhardtii HOM05D005832 ORTHO05D007117 5.4e-12 75.1 157 42.7
Actinidia18663 Actinidia chinensis HOM05D005832 ORTHO05D007117 2.8e-08 62.8 109 74.3


User provided reference genes

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