Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO105G0008 Selaginella moellendorffii HOM05D003492 ORTHO05D005115 0.0e+00 1702.6 848 100.0
SMO331G0080 Selaginella moellendorffii HOM05D003492 ORTHO05D005115 0.0e+00 1280.4 851 81.3
Mapoly0044s0071 Marchantia polymorpha HOM05D003492 ORTHO05D005115 1.2e-294 1016.5 909 61.2
Pp3c11_19460 Physcomitrium patens HOM05D003492 ORTHO05D005115 6.4e-293 1010.7 907 61.1
AagrBONN_evm.TU.Sc2ySwM_344.5492 Anthoceros agrestis HOM05D003492 ORTHO05D005115 2.1e-264 916.0 727 66.9
CBR_g22845 Chara braunii HOM05D003492 ORTHO05D005115 1.8e-239 833.2 867 56.3
Rhsim09G0177900 Rhododendron simsii HOM05D003492 ORTHO05D005115 1.7e-237 826.6 896 51.3
ATR0681G383 Amborella trichopoda HOM05D003492 ORTHO05D005115 8.4e-237 824.3 880 52.0
Nn2g10890 Nelumbo nucifera HOM05D003492 ORTHO05D005115 2.1e-235 819.7 859 52.9
PSO384G0172 Papaver somniferum HOM05D003492 ORTHO05D005115 1.6e-232 810.1 861 51.5
PSO339G2087 Papaver somniferum HOM05D003492 ORTHO05D005115 2.4e-231 806.2 853 51.8
CANSAT56G1673 Cannabis sativa HOM05D003492 ORTHO05D005115 1.3e-229 800.4 855 51.3
GSVIVG01032797001 Vitis vinifera HOM05D003492 ORTHO05D005115 2.5e-228 796.2 855 51.7
Gohir.A10G240100 Gossypium hirsutum HOM05D003492 ORTHO05D005115 2.7e-227 792.7 853 51.1
Gohir.D10G252000 Gossypium hirsutum HOM05D003492 ORTHO05D005115 3.6e-227 792.3 853 51.2
Gorai.011G292500 Gossypium raimondii HOM05D003492 ORTHO05D005115 3.6e-227 792.3 853 51.2
Aqoxy4G02502 Aquilegia oxysepala HOM05D003492 ORTHO05D005115 7.9e-227 791.2 873 49.6
CiPaw.01G300000 Carya illinoinensis HOM05D003492 ORTHO05D005115 1.4e-226 790.4 857 50.3
Prupe.2G252000 Prunus persica HOM05D003492 ORTHO05D005115 1.4e-226 790.4 861 50.4
Potri.008G070300 Populus trichocarpa HOM05D003492 ORTHO05D005115 1.8e-226 790.0 851 50.9
ClCG07G004320 Citrullus lanatus HOM05D003492 ORTHO05D005115 5.1e-226 788.5 860 49.8
CsaV3_5G010260 Cucumis sativus L. HOM05D003492 ORTHO05D005115 2.5e-225 786.2 864 49.3
Dinv10611 Davidia involucrata HOM05D003492 ORTHO05D005115 5.7e-225 785.0 885 50.1
MELO3C026794.2 Cucumis melo HOM05D003492 ORTHO05D005115 9.7e-225 784.3 864 49.3
Manes.07G131200 Manihot esculenta HOM05D003492 ORTHO05D005115 2.2e-224 783.1 853 49.5
TWI09G0940 Tripterygium wilfordii HOM05D003492 ORTHO05D005115 2.8e-224 782.7 856 50.1
Os05g0354300 Oryza sativa ssp. japonica HOM05D003492 ORTHO05D005115 6.3e-224 781.6 852 50.0
Sopen06g014600 Solanum pennellii HOM05D003492 ORTHO05D005115 1.1e-223 780.8 872 49.1
Sed0003450 Sechium edule HOM05D003492 ORTHO05D005115 1.4e-223 780.4 863 48.8
vmacro10035 Vaccinium macrocarpon HOM05D003492 ORTHO05D005115 1.4e-223 780.4 904 49.1
Ciclev10030498m.g Citrus clementina HOM05D003492 ORTHO05D005115 1.8e-223 780.0 862 49.7
Atru.chr12.67 Acer truncatum HOM05D003492 ORTHO05D005115 2.4e-223 779.6 856 50.0
Duzib106G0351 Durio zibethinus HOM05D003492 ORTHO05D005115 1.5e-222 776.9 865 49.0
MSTRG.8339 Avicennia marina HOM05D003492 ORTHO05D005115 2.0e-222 776.5 826 50.4
HPP92_012039 Vanilla planifolia HOM05D003492 ORTHO05D005115 3.4e-222 775.8 859 49.1
RcHm_v2.0_Chr1g0370461 Rosa chinensis HOM05D003492 ORTHO05D005115 5.9e-222 775.0 861 49.4
Migut.F01404 Erythranthe guttata HOM05D003492 ORTHO05D005115 1.0e-221 774.2 813 51.2
MD07G1223400 Malus domestica HOM05D003492 ORTHO05D005115 2.9e-221 772.7 864 49.2
arahy.Tifrunner.gnm1.ann1.J7W2E5 Arachis hypogaea HOM05D003492 ORTHO05D005115 8.5e-221 771.2 865 48.9
Psat2g032000 Pisum sativum HOM05D003492 ORTHO05D005115 8.5e-221 771.2 879 47.9
CSS0013780 Camellia sinensis var. sinensis HOM05D003492 ORTHO05D005115 1.1e-220 770.8 827 51.0
Phvul.008G222900 Phaseolus vulgaris HOM05D003492 ORTHO05D005115 1.1e-220 770.8 864 48.5
Eucgr.G03070 Eucalyptus grandis HOM05D003492 ORTHO05D005115 3.2e-220 769.2 856 49.5
FvH4_7g24630 Fragaria vesca HOM05D003492 ORTHO05D005115 3.2e-220 769.2 863 49.1
VMungo0647G1152 Vigna mungo HOM05D003492 ORTHO05D005115 3.2e-220 769.2 865 48.4
TPR.G38386 Trifolium pratense HOM05D003492 ORTHO05D005115 4.2e-220 768.8 866 48.6
Cpa.g.sc19.161 Carica papaya HOM05D003492 ORTHO05D005115 5.5e-220 768.5 851 49.6
Ca_05974_v3 Cicer arietinum L. HOM05D003492 ORTHO05D005115 5.5e-220 768.5 861 48.5
Medtr5g082890 Medicago truncatula HOM05D003492 ORTHO05D005115 5.5e-220 768.5 879 47.0
LjContig00357g0011776 Lotus japonicus HOM05D003492 ORTHO05D005115 7.2e-220 768.1 879 47.7
arahy.Tifrunner.gnm1.ann1.V2YUX7 Arachis hypogaea HOM05D003492 ORTHO05D005115 2.7e-219 766.1 882 48.1
SGA_v2.0_scaffold365G49997 Striga asiatica HOM05D003492 ORTHO05D005115 2.7e-219 766.1 856 49.2
FAN06G4945 Fragaria x ananassa HOM05D003492 ORTHO05D005115 6.1e-219 765.0 869 48.7
Sc11g0005130 Simmondsia chinensis HOM05D003492 ORTHO05D005115 7.9e-219 764.6 859 49.0
Lalb_Chr04g0250511 Lupinus albus HOM05D003492 ORTHO05D005115 3.9e-218 762.3 892 48.0
Lsat_1_v5_gn_2_124500 Lactuca sativa HOM05D003492 ORTHO05D005115 1.1e-217 760.8 858 49.9
FAN10G4174 Fragaria x ananassa HOM05D003492 ORTHO05D005115 2.0e-217 760.0 879 48.1
Thecc.10G014500 Theobroma cacao HOM05D003492 ORTHO05D005115 2.6e-217 759.6 698 56.4
Glyma.02G258100 Glycine max HOM05D003492 ORTHO05D005115 3.3e-217 759.2 869 48.2
QL08p063313 Quercus lobata HOM05D003492 ORTHO05D005115 5.7e-217 758.4 964 45.2
Cfa001305 Carpinus fangiana HOM05D003492 ORTHO05D005115 1.3e-216 757.3 844 49.2
Solyc06g048460.2 Solanum lycopersicum HOM05D003492 ORTHO05D005115 2.8e-216 756.1 753 53.0
HanXRQChr14g0459601 Helianthus annuus HOM05D003492 ORTHO05D005115 3.7e-216 755.7 872 48.7
DCAR_011823 Daucus carota HOM05D003492 ORTHO05D005115 4.8e-216 755.4 836 50.7
ECA238G3428 Erigeron canadensis HOM05D003492 ORTHO05D005115 3.1e-215 752.7 879 47.9
Sabra08G0051700 Salix brachista HOM05D003492 ORTHO05D005115 3.5e-214 749.2 911 47.0
THA.LOC104816541 Tarenaya hassleriana HOM05D003492 ORTHO05D005115 5.9e-214 748.4 849 48.3
Hund15919 Selenicereus undatus HOM05D003492 ORTHO05D005115 1.5e-212 743.8 868 47.7
FAN01G1605 Fragaria x ananassa HOM05D003492 ORTHO05D005115 3.2e-212 742.7 915 45.8
AUR62012268 Chenopodium quinoa HOM05D003492 ORTHO05D005115 2.7e-211 739.6 864 47.1
BcaB01g05759 Brassica carinata HOM05D003492 ORTHO05D005115 3.3e-209 732.6 855 46.7
AT5G05560 Arabidopsis thaliana HOM05D003492 ORTHO05D005115 1.7e-208 730.3 854 46.4
FAN03G1412 Fragaria x ananassa HOM05D003492 ORTHO05D005115 4.8e-208 728.8 851 47.9
Carub.0006s0446 Capsella rubella HOM05D003492 ORTHO05D005115 1.1e-207 727.6 863 45.9
Sp6g37310 Schrenkiella parvula HOM05D003492 ORTHO05D005115 1.8e-207 726.9 855 46.3
PGR142G1812 Punica granatum HOM05D003492 ORTHO05D005115 5.3e-207 725.3 860 47.1
AL6G15450 Arabidopsis lyrata HOM05D003492 ORTHO05D005115 5.9e-206 721.8 854 46.0
BraA03t09597Z Brassica rapa HOM05D003492 ORTHO05D005115 1.3e-205 720.7 860 46.2
EL10Ac2g04850 Beta vulgaris HOM05D003492 ORTHO05D005115 2.9e-205 719.5 941 44.3
A03p02330 Brassica napus HOM05D003492 ORTHO05D005115 3.8e-205 719.2 863 46.0
BraA02t04853Z Brassica rapa HOM05D003492 ORTHO05D005115 6.5e-205 718.4 860 46.4
BcaB01g05953 Brassica carinata HOM05D003492 ORTHO05D005115 1.5e-204 717.2 847 45.9
C03p02660 Brassica napus HOM05D003492 ORTHO05D005115 3.2e-204 716.1 868 45.6
BolC3t12820H Brassica oleracea HOM05D003492 ORTHO05D005115 4.2e-204 715.7 875 45.3
BolC2t06204H Brassica oleracea HOM05D003492 ORTHO05D005115 6.1e-203 711.8 870 45.9
TAR623G0495 Trochodendron aralioides HOM05D003492 ORTHO05D005115 8.0e-203 711.4 786 51.7
Peaxi162Scf00284g00913 Petunia axillaris HOM05D003492 ORTHO05D005115 1.4e-202 710.7 656 56.7
C02p02390 Brassica napus HOM05D003492 ORTHO05D005115 6.8e-202 708.4 876 45.5
Glyma.14G058400 Glycine max HOM05D003492 ORTHO05D005115 2.0e-201 706.8 863 45.9
AUR62022903 Chenopodium quinoa HOM05D003492 ORTHO05D005115 4.4e-201 705.7 862 45.6
Aa31LG11G6620 Aethionema arabicum HOM05D003492 ORTHO05D005115 1.2e-195 687.6 826 45.6
CARHR207700 Cardamine hirsuta HOM05D003492 ORTHO05D005115 8.8e-194 681.4 862 44.2
Haze_17240 Corylus avellana HOM05D003492 ORTHO05D005115 1.7e-189 667.2 918 43.2
unitig_60.g25675 Utricularia gibba HOM05D003492 ORTHO05D005115 1.1e-188 664.5 901 42.8
Ah.16g103640 Amaranthus hybridus HOM05D003492 ORTHO05D005115 7.3e-188 661.8 857 44.6
Thhalv10012420m.g Eutrema salsugineum HOM05D003492 ORTHO05D005115 3.4e-185 652.9 840 43.8
Nitab4.5_0000797g0050 Nicotiana tabacum HOM05D003492 ORTHO05D005115 1.3e-184 651.0 768 48.3
MCO04G065 Micromonas commoda HOM05D003492 ORTHO05D005115 1.2e-169 601.3 735 47.5
Nitab4.5_0011089g0010 Nicotiana tabacum HOM05D003492 ORTHO05D005115 1.1e-159 568.2 947 38.6
CDE12G0911 Ceratophyllum demersum HOM05D003492 ORTHO05D005115 5.4e-159 565.8 742 44.1
SEGI_27844 Sequoiadendron giganteum HOM05D003492 ORTHO05D005115 2.5e-156 557.0 544 55.7
CAN.G1193.3 Capsicum annuum HOM05D003492 ORTHO05D005115 6.4e-152 542.3 529 54.1
BcaB05g21711 Brassica carinata HOM05D003492 ORTHO05D005115 1.2e-150 538.1 539 52.3
SHI03328 Sapria himalayana HOM05D003492 ORTHO05D005115 4.0e-146 523.1 529 52.7
Actinidia13944 Actinidia chinensis HOM05D003492 ORTHO05D005115 3.8e-120 436.8 548 47.6
Cre13.g579100 Chlamydomonas reinhardtii HOM05D003492 ORTHO05D005115 4.6e-110 403.3 668 39.2
Cc02_g06280 Coffea canephora HOM05D003492 ORTHO05D005115 8.8e-101 372.5 323 56.3
CAN.G78.71 Capsicum annuum HOM05D003492 ORTHO05D005115 3.8e-96 357.1 336 56.2
Zm00001eb286110 Zea mays HOM05D003492 ORTHO05D005115 5.0e-96 356.7 320 55.6
Rhsim10G0095300 Rhododendron simsii HOM05D003492 ORTHO05D005115 2.3e-93 347.8 350 53.1
Cfa022850 Carpinus fangiana HOM05D003492 ORTHO05D005115 1.9e-87 328.2 561 35.7
Oeu049666.1 Olea europaea HOM05D003492 ORTHO05D005115 9.4e-87 325.9 350 48.3
Rhsim05G0134800 Rhododendron simsii HOM05D003492 ORTHO05D005115 9.4e-87 325.9 559 38.5
Cc02_g06300 Coffea canephora HOM05D003492 ORTHO05D005115 2.3e-85 321.2 425 43.1
Lj8C65G6 Lonicera japonica HOM05D003492 ORTHO05D005115 1.4e-82 312.0 330 49.7
Lj8A65G43 Lonicera japonica HOM05D003492 ORTHO05D005115 3.1e-82 310.8 282 60.6
SalBow5G5368 Salvia bowleyana HOM05D003492 ORTHO05D005115 1.7e-64 251.9 351 44.7
Actinidia35642 Actinidia chinensis HOM05D003492 ORTHO05D005115 2.5e-55 221.5 314 41.1
MBI15_g19421_MAGBIO Magnolia biondii HOM05D003492 ORTHO05D005115 2.2e-51 208.4 348 38.2
SEGI_23081 Sequoiadendron giganteum HOM05D003492 ORTHO05D019467 3.1e-21 108.2 217 34.6
CAN.G78.70 Capsicum annuum HOM05D003492 ORTHO05D005115 2.6e-20 105.1 72 61.1
CDE12G0028 Ceratophyllum demersum HOM05D003492 ORTHO05D005115 2.6e-20 105.1 73 61.6
Lsat_1_v5_gn_4_75100 Lactuca sativa HOM05D003492 ORTHO05D016080 3.4e-20 104.8 96 46.9
Gorai.011G292700 Gossypium raimondii HOM05D003492 ORTHO05D005115 6.4e-19 100.5 73 54.8
Cc02_g06290 Coffea canephora HOM05D003492 ORTHO05D005115 2.3e-16 92.0 113 49.6
Lsat_1_v5_gn_1_82880 Lactuca sativa HOM05D003492 ORTHO05D005115 3.7e-14 84.7 111 43.2
Actinidia13945 Actinidia chinensis HOM05D003492 ORTHO05D005115 3.1e-13 81.6 53 62.3
Thhalv10015394m.g Eutrema salsugineum HOM05D003492 ORTHO05D035223 4.5e-12 77.8 167 33.5
Lsat_1_v5_gn_9_80501 Lactuca sativa HOM05D003662 ORTHO05D001824 1.7e-11 75.9 144 36.8
BcaB01g05927 Brassica carinata HOM05D003492 ORTHO05D016080 4.9e-11 74.3 123 39.0
SEGI_00595 Sequoiadendron giganteum HOM05D003492 ORTHO05D005115 1.4e-10 72.8 45 62.2
Lsat_1_v5_gn_7_99341 Lactuca sativa HOM05D003492 ORTHO05D016080 4.6e-09 67.8 85 35.3
SHI03332 Sapria himalayana HOM05D003492 ORTHO05D005115 5.1e-08 64.3 45 55.6
SHI03327 Sapria himalayana HOM05D003492 ORTHO05D000001 6.3e-06 57.4 88 36.4


User provided reference genes

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