Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO086G0058 Selaginella moellendorffii HOM05D001200 ORTHO05D009713 5.3e-43 177.2 83 100.0
Sed0023939 Sechium edule HOM05D001200 ORTHO05D009713 2.2e-25 118.6 81 74.1
Glyma.18G155300 Glycine max HOM05D001200 ORTHO05D009713 1.0e-22 109.8 81 66.7
CARHR282430 Cardamine hirsuta HOM05D001200 ORTHO05D009713 3.3e-21 104.8 81 64.2
Medtr4g050960 Medicago truncatula HOM05D001200 ORTHO05D009713 3.3e-21 104.8 81 64.2
arahy.Tifrunner.gnm1.ann1.WH1VZM Arachis hypogaea HOM05D001200 ORTHO05D009713 9.7e-21 103.2 81 65.4
Hund24329 Selenicereus undatus HOM05D001200 ORTHO05D009713 1.7e-20 102.4 81 64.2
Nitab4.5_0007979g0060 Nicotiana tabacum HOM05D001200 ORTHO05D009778 2.8e-20 101.7 67 74.6
ATCG01060 Arabidopsis thaliana HOM05D001200 ORTHO05D009713 3.7e-20 101.3 81 63.0
BolSC29t60505H Brassica oleracea HOM05D001200 ORTHO05D009713 3.7e-20 101.3 81 63.0
BolSC35t60703H Brassica oleracea HOM05D001200 ORTHO05D009713 3.7e-20 101.3 81 63.0
BolSC37t60792H Brassica oleracea HOM05D001200 ORTHO05D009713 3.7e-20 101.3 81 63.0
BolSC46t60959H Brassica oleracea HOM05D001200 ORTHO05D009713 3.7e-20 101.3 81 63.0
BolSC49t61142H Brassica oleracea HOM05D001200 ORTHO05D009713 3.7e-20 101.3 81 63.0
BraSC103t45428Z Brassica rapa HOM05D001200 ORTHO05D009713 3.7e-20 101.3 81 63.0
BraSC143t45661Z Brassica rapa HOM05D001200 ORTHO05D009713 3.7e-20 101.3 81 63.0
BraSC179t45775Z Brassica rapa HOM05D001200 ORTHO05D009713 3.7e-20 101.3 81 63.0
BraSC59t46550Z Brassica rapa HOM05D001200 ORTHO05D009713 3.7e-20 101.3 81 63.0
CAN.G1526.3 Capsicum annuum HOM05D001200 ORTHO05D009713 3.7e-20 101.3 81 63.0
CAN.G1526.8 Capsicum annuum HOM05D001200 ORTHO05D009713 3.7e-20 101.3 81 63.0
CAN.G278.4 Capsicum annuum HOM05D001200 ORTHO05D009713 3.7e-20 101.3 81 63.0
Migut.D01253 Erythranthe guttata HOM05D001200 ORTHO05D009713 3.7e-20 101.3 81 63.0
Gohir.1Z049631 Gossypium hirsutum HOM05D001200 ORTHO05D009713 3.7e-20 101.3 81 63.0
Gohir.A02G134400 Gossypium hirsutum HOM05D001200 ORTHO05D009713 3.7e-20 101.3 81 63.0
Gohir.A09G046200 Gossypium hirsutum HOM05D001200 ORTHO05D009713 3.7e-20 101.3 81 63.0
Hma1.2p1_0382F.1_g140210 Hydrangea macrophylla HOM05D001200 ORTHO05D009713 3.7e-20 101.3 81 63.0
Nn064s42211 Nelumbo nucifera HOM05D001200 ORTHO05D009713 3.7e-20 101.3 81 63.0
PSO548G0036 Papaver somniferum HOM05D001200 ORTHO05D009713 3.7e-20 101.3 81 63.0
PGR111G0008 Punica granatum HOM05D001200 ORTHO05D009713 3.7e-20 101.3 81 63.0
RcHm_v2.0_Chr5g0017221 Rosa chinensis HOM05D001200 ORTHO05D009713 3.7e-20 101.3 81 63.0
RcHm_v2.0_Chr5g0043041 Rosa chinensis HOM05D001200 ORTHO05D009713 3.7e-20 101.3 81 63.0
RcHm_v2.0_CPg0502781 Rosa chinensis HOM05D001200 ORTHO05D009713 3.7e-20 101.3 81 63.0
HanXRQChr00c0336g0573651 Helianthus annuus HOM05D001200 ORTHO05D009713 6.3e-20 100.5 81 61.7
HanXRQChr09g0246671 Helianthus annuus HOM05D001200 ORTHO05D009713 6.3e-20 100.5 81 61.7
Lsat_1_v5_gn_1_14180 Lactuca sativa HOM05D001200 ORTHO05D009713 6.3e-20 100.5 81 61.7
EL10As15g24099 Beta vulgaris HOM05D001200 ORTHO05D009778 1.1e-19 99.8 81 61.7
BolSC45t60910H Brassica oleracea HOM05D001200 ORTHO05D009713 1.4e-19 99.4 81 63.0
Medtr4g006120 Medicago truncatula HOM05D001200 ORTHO05D002731 1.4e-19 99.4 80 62.5
Medtr7g021720 Medicago truncatula HOM05D001200 ORTHO05D002731 1.4e-19 99.4 80 62.5
Nn3g20217 Nelumbo nucifera HOM05D001200 ORTHO05D009713 1.4e-19 99.4 81 60.5
EL10As15g24137 Beta vulgaris HOM05D001200 ORTHO05D002731 1.8e-19 99.0 79 63.3
CAN.G965.7 Capsicum annuum HOM05D001200 ORTHO05D009713 1.8e-19 99.0 81 61.7
C04p22670 Brassica napus HOM05D001200 ORTHO05D009713 2.4e-19 98.6 81 60.5
Hund27883 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-19 98.6 77 62.3
Hund28330 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-19 98.6 77 62.3
Hund28851 Selenicereus undatus HOM05D001200 ORTHO05D009713 2.4e-19 98.6 77 62.3
Hund29433 Selenicereus undatus HOM05D001200 ORTHO05D009713 2.4e-19 98.6 77 62.3
Hund30513 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-19 98.6 77 62.3
Hund27630 Selenicereus undatus HOM05D001200 ORTHO05D009713 3.1e-19 98.2 76 63.2
Hund28597 Selenicereus undatus HOM05D001200 ORTHO05D009713 3.1e-19 98.2 76 63.2
Cpa.g.sc63.22 Carica papaya HOM05D001200 ORTHO05D009713 4.1e-19 97.8 81 60.5
Os09g0485201 Oryza sativa ssp. japonica HOM05D001200 ORTHO05D009713 4.1e-19 97.8 81 59.3
DCAR_032537 Daucus carota HOM05D001200 ORTHO05D009713 5.3e-19 97.4 81 61.7
BolC9t56926H Brassica oleracea HOM05D001200 ORTHO05D009713 9.1e-19 96.7 81 60.5
HanXRQChr02g0038661 Helianthus annuus HOM05D001200 ORTHO05D009713 9.1e-19 96.7 81 59.3
Hund30643 Selenicereus undatus HOM05D001200 ORTHO05D009713 9.1e-19 96.7 75 62.7
Potri.019G014344 Populus trichocarpa HOM05D001200 ORTHO05D009713 1.6e-18 95.9 79 63.3
Gohir.D06G133600 Gossypium hirsutum HOM05D001200 ORTHO05D009713 2.0e-18 95.5 81 59.3
HanXRQChr17g0557761 Helianthus annuus HOM05D001200 ORTHO05D002731 2.0e-18 95.5 78 61.5
Lalb_Chr07g0191761 Lupinus albus HOM05D001200 ORTHO05D002731 2.0e-18 95.5 76 63.2
Nn1g00557 Nelumbo nucifera HOM05D001200 ORTHO05D009713 2.0e-18 95.5 81 59.3
Nitab4.5_0001313g0070 Nicotiana tabacum HOM05D001200 ORTHO05D009778 2.0e-18 95.5 81 60.5
HanXRQChr09g0244731 Helianthus annuus HOM05D001200 ORTHO05D009713 4.5e-18 94.4 76 63.2
arahy.Tifrunner.gnm1.ann1.USFH3V Arachis hypogaea HOM05D001200 ORTHO05D009713 5.9e-18 94.0 76 61.8
TPR.G30364 Trifolium pratense HOM05D001200 ORTHO05D009713 5.9e-18 94.0 57 82.5
C09p40360 Brassica napus HOM05D001200 ORTHO05D009713 1.0e-17 93.2 64 73.4
BolC9t56924H Brassica oleracea HOM05D001200 ORTHO05D009713 1.0e-17 93.2 64 73.4
HanXRQChr00c0504g0575301 Helianthus annuus HOM05D001200 ORTHO05D009713 1.0e-17 93.2 77 61.0
Oeu043656.1 Olea europaea HOM05D001200 ORTHO05D009713 2.2e-17 92.0 81 58.0
Gorai.009G377500 Gossypium raimondii HOM05D001200 ORTHO05D009713 2.9e-17 91.7 81 58.0
C07p33440 Brassica napus HOM05D001200 ORTHO05D009713 3.8e-17 91.3 64 73.4
C09p24630 Brassica napus HOM05D001200 ORTHO05D009713 3.8e-17 91.3 64 73.4
C09p40200 Brassica napus HOM05D001200 ORTHO05D009713 3.8e-17 91.3 64 73.4
C09p40340 Brassica napus HOM05D001200 ORTHO05D009713 1.1e-16 89.7 77 63.6
CARHR258570 Cardamine hirsuta HOM05D001200 ORTHO05D009713 1.5e-16 89.4 53 81.1
BraSC25t45909Z Brassica rapa HOM05D001200 ORTHO05D009713 4.2e-16 87.8 70 64.3
AL9U11952 Arabidopsis lyrata HOM05D001200 ORTHO05D009713 5.5e-16 87.4 53 81.1
HanXRQChr17g0569731 Helianthus annuus HOM05D001200 ORTHO05D009778 9.4e-16 86.7 58 69.0
BolSC29t60545H Brassica oleracea HOM05D001200 ORTHO05D009713 2.1e-15 85.5 47 80.9
BolSC35t60693H Brassica oleracea HOM05D001200 ORTHO05D009713 2.1e-15 85.5 47 80.9
BolSC44t60821H Brassica oleracea HOM05D001200 ORTHO05D009713 2.1e-15 85.5 47 80.9
HanXRQChr00c0690g0576761 Helianthus annuus HOM05D001200 ORTHO05D002731 2.1e-15 85.5 47 80.9
HanXRQChr02g0059711 Helianthus annuus HOM05D001200 ORTHO05D002731 2.1e-15 85.5 47 80.9
HanXRQChr05g0152431 Helianthus annuus HOM05D001200 ORTHO05D002731 2.1e-15 85.5 47 80.9
HanXRQChr09g0258521 Helianthus annuus HOM05D001200 ORTHO05D002731 2.1e-15 85.5 47 80.9
HanXRQChr11g0323741 Helianthus annuus HOM05D001200 ORTHO05D002731 2.1e-15 85.5 47 80.9
HanXRQCPg0580351 Helianthus annuus HOM05D001200 ORTHO05D002731 2.1e-15 85.5 47 80.9
MELO3C027236.2 Cucumis melo HOM05D001200 ORTHO05D009713 3.6e-15 84.7 53 79.2
Gorai.004G082100 Gossypium raimondii HOM05D001200 ORTHO05D009713 4.7e-15 84.3 53 77.4
HanXRQChr02g0038701 Helianthus annuus HOM05D001200 ORTHO05D009713 8.0e-15 83.6 47 78.7
GSVIVG01034636001 Vitis vinifera HOM05D001200 ORTHO05D009713 8.0e-15 83.6 46 80.4
Gohir.A09G017925 Gossypium hirsutum HOM05D001200 ORTHO05D009713 1.0e-14 83.2 72 58.3
HanXRQChr14g0428461 Helianthus annuus HOM05D001200 ORTHO05D009713 1.4e-14 82.8 53 77.4
Sed0013644 Sechium edule HOM05D000533 ORTHO05D006151 1.8e-14 82.4 67 64.2
Sed0016654 Sechium edule HOM05D000533 ORTHO05D006151 1.8e-14 82.4 67 64.2
Sed0021575 Sechium edule HOM05D000533 ORTHO05D006151 1.8e-14 82.4 67 64.2
Nitab4.5_0001342g0130 Nicotiana tabacum HOM05D001200 ORTHO05D002731 2.3e-14 82.0 74 55.4
HanXRQChr13g0388461 Helianthus annuus HOM05D001200 ORTHO05D009713 6.8e-14 80.5 56 71.4
TPR.G17259 Trifolium pratense HOM05D000404 ORTHO05D009713 8.8e-14 80.1 47 76.6
TPR.G6643 Trifolium pratense HOM05D001044 ORTHO05D008486 8.8e-14 80.1 51 78.4
CAN.G8.22 Capsicum annuum HOM05D001200 ORTHO05D009713 1.5e-13 79.3 53 71.7
CsaV3_UNG210150 Cucumis sativus L. HOM05D001200 ORTHO05D009713 1.5e-13 79.3 67 61.2
HanXRQChr03g0073101 Helianthus annuus HOM05D001200 ORTHO05D002731 2.6e-13 78.6 47 76.6
MELO3C029829.2 Cucumis melo HOM05D001200 ORTHO05D009713 4.8e-12 74.3 53 69.8
Medtr0002s0170 Medicago truncatula HOM05D001200 ORTHO05D002731 4.8e-12 74.3 37 89.2
SabraPtG0005600 Salix brachista HOM05D000533 ORTHO05D006151 4.8e-12 74.3 37 89.2
Gohir.D08G077250 Gossypium hirsutum HOM05D001200 ORTHO05D009713 8.3e-12 73.6 53 69.8
Nn1g08635 Nelumbo nucifera HOM05D001200 ORTHO05D009713 1.8e-11 72.4 78 51.3
Lalb_Chr13g0292811 Lupinus albus HOM05D001200 ORTHO05D009713 9.1e-11 70.1 46 76.1
BolC2t10595H Brassica oleracea HOM05D001200 ORTHO05D009713 1.2e-10 69.7 38 76.3
BolC7t43855H Brassica oleracea HOM05D001200 ORTHO05D009713 3.5e-10 68.2 42 76.2
CAN.G904.13 Capsicum annuum HOM05D001200 ORTHO05D009713 4.5e-10 67.8 41 78.0
BraSC138t45535Z Brassica rapa HOM05D001200 ORTHO05D009713 1.0e-09 66.6 33 90.9
Solyc02g011760.1 Solanum lycopersicum HOM05D001200 ORTHO05D009713 2.9e-09 65.1 48 70.8
HanXRQChr08g0213671 Helianthus annuus HOM05D001200 ORTHO05D009713 5.0e-09 64.3 54 61.1
BolC9t56806H Brassica oleracea HOM05D001200 ORTHO05D009713 6.5e-09 63.9 43 74.4
Sed0012820 Sechium edule HOM05D001200 ORTHO05D009713 1.1e-08 63.2 81 45.7
Lalb_Chr18g0049421 Lupinus albus HOM05D001200 ORTHO05D009713 7.2e-08 60.5 49 63.3
Gohir.A05G291020 Gossypium hirsutum HOM05D001163 ORTHO05D001769 9.4e-08 60.1 33 75.8
Hund10653 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.7e-07 58.5 46 71.7
Hund03918 Selenicereus undatus HOM05D001200 ORTHO05D009713 1.0e-06 56.6 43 67.4
MBI16_g21734_MAGBIO Magnolia biondii HOM05D001200 ORTHO05D009778 1.8e-06 55.8 30 80.0
HanXRQChr08g0211961 Helianthus annuus HOM05D001200 ORTHO05D002731 2.3e-06 55.5 29 79.3
Medtr4g026420 Medicago truncatula HOM05D001200 ORTHO05D009713 4.0e-06 54.7 74 47.3
Aa31LG10G9900 Aethionema arabicum HOM05D000002 ORTHO05D000001 6.8e-06 53.9 39 64.1


User provided reference genes

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