Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO010G0007 Selaginella moellendorffii HOM05D006460 ORTHO05D008143 7.9e-241 836.6 407 100.0
SMO339G0034 Selaginella moellendorffii HOM05D006460 ORTHO05D008143 4.5e-111 405.6 234 85.5
AagrBONN_evm.TU.Sc2ySwM_228.322 Anthoceros agrestis HOM05D006460 ORTHO05D008143 3.1e-104 382.9 452 46.2
AagrBONN_evm.TU.Sc2ySwM_344.3324 Anthoceros agrestis HOM05D006460 ORTHO05D008143 9.1e-104 381.3 450 46.4
Mapoly0095s0050 Marchantia polymorpha HOM05D006460 ORTHO05D008143 1.7e-102 377.1 494 43.1
Pp3c21_16200 Physcomitrium patens HOM05D006460 ORTHO05D008143 5.3e-96 355.5 520 40.8
Gorai.001G146600 Gossypium raimondii HOM05D006460 ORTHO05D008143 7.0e-96 355.1 452 40.9
Lalb_Chr17g0338451 Lupinus albus HOM05D006460 ORTHO05D008143 1.6e-95 354.0 462 41.3
Gohir.D07G134900 Gossypium hirsutum HOM05D006460 ORTHO05D008143 2.0e-95 353.6 452 40.7
Atru.chr5.915 Acer truncatum HOM05D006460 ORTHO05D008143 5.9e-95 352.1 455 41.1
Cpa.g.sc543.2 Carica papaya HOM05D006460 ORTHO05D008143 1.3e-94 350.9 465 40.6
VMungo1215G1636 Vigna mungo HOM05D006460 ORTHO05D008143 1.3e-94 350.9 462 41.6
Glyma.07G170000 Glycine max HOM05D006460 ORTHO05D008143 2.2e-94 350.1 461 41.2
Lj2g0013221 Lotus japonicus HOM05D006460 ORTHO05D008143 2.9e-94 349.7 460 42.2
COL.COLO4_23162 Corchorus olitorius HOM05D006460 ORTHO05D008143 5.0e-94 349.0 455 41.3
Duzib138G1376 Durio zibethinus HOM05D006460 ORTHO05D008143 6.5e-94 348.6 453 40.2
Sc17g0000180 Simmondsia chinensis HOM05D006460 ORTHO05D008143 1.9e-93 347.1 455 40.2
Solyc01g068050.3 Solanum lycopersicum HOM05D006460 ORTHO05D008143 3.2e-93 346.3 457 40.9
PGR083G0788 Punica granatum HOM05D006460 ORTHO05D008143 4.2e-93 345.9 462 39.4
HanXRQChr13g0414441 Helianthus annuus HOM05D006460 ORTHO05D008143 7.2e-93 345.1 426 41.8
CiPaw.04G089700 Carya illinoinensis HOM05D006460 ORTHO05D008143 9.4e-93 344.7 450 40.0
Phvul.003G019300 Phaseolus vulgaris HOM05D006460 ORTHO05D008143 9.4e-93 344.7 454 41.2
PGSC0003DMG400005211 Solanum tuberosum HOM05D006460 ORTHO05D008143 1.2e-92 344.4 457 40.9
Medtr1g032120 Medicago truncatula HOM05D006460 ORTHO05D008143 2.1e-92 343.6 458 40.2
THA.LOC104801320 Tarenaya hassleriana HOM05D006460 ORTHO05D008143 2.1e-92 343.6 449 40.5
Ca_12543_v3 Cicer arietinum L. HOM05D006460 ORTHO05D008143 3.6e-92 342.8 458 40.0
Cc01_g21920 Coffea canephora HOM05D006460 ORTHO05D008143 4.7e-92 342.4 463 40.6
Haze_05122 Corylus avellana HOM05D006460 ORTHO05D008143 8.0e-92 341.7 450 40.0
Ciclev10001046m.g Citrus clementina HOM05D006460 ORTHO05D008143 1.0e-91 341.3 452 39.6
Nn4g25417 Nelumbo nucifera HOM05D006460 ORTHO05D008143 1.0e-91 341.3 484 38.6
Migut.D00030 Erythranthe guttata HOM05D006460 ORTHO05D008143 1.4e-91 340.9 464 40.9
ATR0796G118 Amborella trichopoda HOM05D006460 ORTHO05D008143 2.3e-91 340.1 502 37.8
CANSAT56G1882 Cannabis sativa HOM05D006460 ORTHO05D008143 3.0e-91 339.7 467 39.4
Psat6g046360 Pisum sativum HOM05D006460 ORTHO05D008143 3.0e-91 339.7 458 39.5
GSVIVG01028196001 Vitis vinifera HOM05D006460 ORTHO05D008143 3.0e-91 339.7 458 39.7
Thhalv10028644m.g Eutrema salsugineum HOM05D006460 ORTHO05D008143 5.2e-91 339.0 458 39.1
Thhalv10028645m.g Eutrema salsugineum HOM05D006460 ORTHO05D008143 5.2e-91 339.0 458 39.1
Sp6g01720 Schrenkiella parvula HOM05D006460 ORTHO05D008143 8.8e-91 338.2 459 40.3
TWI14G0400 Tripterygium wilfordii HOM05D006460 ORTHO05D008143 8.8e-91 338.2 458 40.2
TAR362G0080 Trochodendron aralioides HOM05D006460 ORTHO05D008143 8.8e-91 338.2 482 39.8
MD09G1293200 Malus domestica HOM05D006460 ORTHO05D008143 1.2e-90 337.8 460 39.6
Oeu002575.1 Olea europaea HOM05D006460 ORTHO05D008143 1.5e-90 337.4 466 39.7
Eucgr.H00886 Eucalyptus grandis HOM05D006460 ORTHO05D008143 2.0e-90 337.0 460 38.9
BraA03t12325Z Brassica rapa HOM05D006460 ORTHO05D008143 2.6e-90 336.7 446 40.1
CARHR249840 Cardamine hirsuta HOM05D006460 ORTHO05D008143 3.3e-90 336.3 447 40.5
BcaB01g02385 Brassica carinata HOM05D006460 ORTHO05D008143 5.7e-90 335.5 445 39.6
Prupe.3G004500 Prunus persica HOM05D006460 ORTHO05D008143 5.7e-90 335.5 462 39.6
QL12p034319 Quercus lobata HOM05D006460 ORTHO05D008143 7.5e-90 335.1 466 38.0
AT4G01880 Arabidopsis thaliana HOM05D006460 ORTHO05D008143 1.3e-89 334.3 448 40.0
Carub.0006s3536 Capsella rubella HOM05D006460 ORTHO05D008143 2.2e-89 333.6 444 40.3
CAN.G100.27 Capsicum annuum HOM05D006460 ORTHO05D008143 2.8e-89 333.2 455 40.0
CDE08G1018 Ceratophyllum demersum HOM05D006460 ORTHO05D008143 2.8e-89 333.2 467 38.8
FvH4_1g26500 Fragaria vesca HOM05D006460 ORTHO05D008143 4.8e-89 332.4 473 38.3
SalBow6G2760 Salvia bowleyana HOM05D006460 ORTHO05D008143 4.8e-89 332.4 461 39.7
HPP92_010877 Vanilla planifolia HOM05D000746 ORTHO05D000573 4.8e-89 332.4 444 40.8
Manes.05G010900 Manihot esculenta HOM05D006460 ORTHO05D008143 1.8e-88 330.5 432 40.7
Nitab4.5_0000222g0270 Nicotiana tabacum HOM05D006460 ORTHO05D008143 3.1e-88 329.7 477 38.2
CSS0037090 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 5.3e-88 328.9 490 38.6
DCAR_012316 Daucus carota HOM05D006460 ORTHO05D008143 5.3e-88 328.9 461 38.2
Lsat_1_v5_gn_8_167341 Lactuca sativa HOM05D006460 ORTHO05D008143 7.0e-88 328.6 428 40.9
Aqoxy5G02768 Aquilegia oxysepala HOM05D006460 ORTHO05D008143 2.0e-87 327.0 467 39.0
FAN28G1427 Fragaria x ananassa HOM05D006460 ORTHO05D008143 2.7e-87 326.6 473 38.5
Sed0027463 Sechium edule HOM05D006460 ORTHO05D008143 3.5e-87 326.2 458 38.9
TPR.G36866 Trifolium pratense HOM05D006460 ORTHO05D008143 4.5e-87 325.9 493 37.7
Aa31LG5G1480 Aethionema arabicum HOM05D006460 ORTHO05D008143 7.7e-87 325.1 471 38.2
AL6G51420 Arabidopsis lyrata HOM05D006460 ORTHO05D008143 7.7e-87 325.1 454 38.5
arahy.Tifrunner.gnm1.ann1.N25L3F Arachis hypogaea HOM05D006460 ORTHO05D008143 1.3e-86 324.3 484 38.2
Actinidia21358 Actinidia chinensis HOM05D006460 ORTHO05D008143 1.7e-86 323.9 473 38.3
RcHm_v2.0_Chr3g0486571 Rosa chinensis HOM05D006460 ORTHO05D008143 1.7e-86 323.9 475 37.3
Zm00001eb211340 Zea mays HOM05D006460 ORTHO05D008143 1.7e-86 323.9 357 45.1
PSO357G0369 Papaver somniferum HOM05D006460 ORTHO05D008143 3.8e-86 322.8 460 39.3
arahy.Tifrunner.gnm1.ann1.R72PZK Arachis hypogaea HOM05D006460 ORTHO05D008143 5.0e-86 322.4 491 37.7
Gohir.A07G130500 Gossypium hirsutum HOM05D006460 ORTHO05D008143 8.5e-86 321.6 453 39.5
Potri.002G189800 Populus trichocarpa HOM05D006460 ORTHO05D008143 1.9e-85 320.5 363 44.4
Sabra02G0165800 Salix brachista HOM05D006460 ORTHO05D008143 1.9e-85 320.5 362 43.9
ClCG09G004700 Citrullus lanatus HOM05D006460 ORTHO05D008143 3.2e-85 319.7 468 37.2
MSTRG.21724 Avicennia marina HOM05D006460 ORTHO05D008143 5.5e-85 318.9 462 37.4
ECA236G0789 Erigeron canadensis HOM05D004810 ORTHO05D006272 1.6e-84 317.4 396 42.4
Lj1C11T12 Lonicera japonica HOM05D006460 ORTHO05D008143 2.7e-84 316.6 470 37.4
SGA_v2.0_scaffold417G51258 Striga asiatica HOM05D006460 ORTHO05D008143 4.0e-83 312.8 463 38.4
AUR62024570 Chenopodium quinoa HOM05D006460 ORTHO05D008143 2.6e-82 310.1 444 37.2
BcaC01g06799 Brassica carinata HOM05D006460 ORTHO05D008143 3.4e-82 309.7 355 44.2
BolC3t16117H Brassica oleracea HOM05D006460 ORTHO05D008143 3.4e-82 309.7 355 44.2
C03p38430 Brassica napus HOM05D006460 ORTHO05D008143 4.4e-82 309.3 355 44.2
AUR62011736 Chenopodium quinoa HOM05D006460 ORTHO05D008143 1.3e-81 307.8 444 37.4
Thecc.01G322200 Theobroma cacao HOM05D006460 ORTHO05D008143 1.3e-81 307.8 455 37.8
A03p31440 Brassica napus HOM05D006460 ORTHO05D008143 2.2e-81 307.0 355 43.9
vmacro02372 Vaccinium macrocarpon HOM05D006460 ORTHO05D008143 3.1e-80 303.1 523 35.8
PSO170G6216 Papaver somniferum HOM05D006460 ORTHO05D008143 3.3e-77 293.1 386 40.9
Rhsim13G0001100 Rhododendron simsii HOM05D006460 ORTHO05D008143 3.3e-77 293.1 419 39.1
FAN19G0891 Fragaria x ananassa HOM05D006460 ORTHO05D008143 4.2e-77 292.7 471 35.5
Cfa004883 Carpinus fangiana HOM05D006460 ORTHO05D008143 1.6e-76 290.8 410 39.0
FAN26G0500 Fragaria x ananassa HOM05D006460 ORTHO05D008143 3.6e-76 289.7 471 35.0
PSO384G3244 Papaver somniferum HOM05D006460 ORTHO05D008143 6.1e-76 288.9 387 40.8
Hund09677 Selenicereus undatus HOM05D006460 ORTHO05D008143 1.4e-75 287.7 459 35.7
EL10As5g23582 Beta vulgaris HOM05D006460 ORTHO05D008143 4.4e-74 282.7 463 37.1
Nitab4.5_0002994g0020 Nicotiana tabacum HOM05D006460 ORTHO05D008143 7.0e-72 275.4 470 34.5
Eucgr.L00887 Eucalyptus grandis HOM05D006460 ORTHO05D008143 8.6e-70 268.5 354 39.5
CSS0008981 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 2.5e-69 266.9 368 40.8
CsaV3_7G030430 Cucumis sativus L. HOM05D006460 ORTHO05D008143 5.6e-69 265.8 360 39.4
MELO3C023610.2 Cucumis melo HOM05D006460 ORTHO05D008143 1.2e-68 264.6 441 33.8
Dinv33158 Davidia involucrata HOM05D001974 ORTHO05D001995 2.1e-68 263.8 337 41.5
Sopen01g029980 Solanum pennellii HOM05D006460 ORTHO05D008143 8.0e-60 235.3 292 42.5
Ah.11g045760 Amaranthus hybridus HOM05D006460 ORTHO05D008143 5.2e-59 232.6 437 33.0
Peaxi162Scf00919g00047 Petunia axillaris HOM05D006460 ORTHO05D008143 6.6e-54 215.7 345 35.9
MCO13G012 Micromonas commoda HOM05D006460 ORTHO05D008143 1.2e-52 211.5 481 32.0
Os03g0833200 Oryza sativa ssp. japonica HOM05D006460 ORTHO05D008143 8.9e-51 205.3 241 42.7
unitig_578.g16638 Utricularia gibba HOM05D006460 ORTHO05D008143 5.6e-45 186.0 400 30.0
PRCOL_00001885 Prasinoderma coloniale HOM05D006460 ORTHO05D008143 2.2e-41 174.1 473 28.8
SEGI_40178 Sequoiadendron giganteum HOM05D006460 ORTHO05D008143 2.7e-39 167.2 291 37.1
MBI18_g28900_MAGBIO Magnolia biondii HOM05D006460 ORTHO05D008143 6.0e-39 166.0 439 27.6
AagrBONN_evm.TU.Sc2ySwM_228.45 Anthoceros agrestis HOM05D006460 ORTHO05D008143 1.8e-27 127.9 219 40.2
CBR_g49426 Chara braunii HOM05D006460 ORTHO05D008143 2.5e-21 107.5 108 46.3
AUR62036055 Chenopodium quinoa HOM05D006460 ORTHO05D008143 4.3e-21 106.7 157 37.6
AUR62029044 Chenopodium quinoa HOM05D006460 ORTHO05D008143 6.2e-20 102.8 157 36.9
MD17G1281000 Malus domestica HOM05D006460 ORTHO05D008143 1.4e-16 91.7 214 29.9
Cre16.g654992 Chlamydomonas reinhardtii HOM05D006460 ORTHO05D008143 1.9e-16 91.3 376 24.5
RcHm_v2.0_Chr7g0232271 Rosa chinensis HOM05D006460 ORTHO05D008143 9.3e-08 62.4 60 50.0
AUR62007801 Chenopodium quinoa HOM05D006460 ORTHO05D008143 1.6e-07 61.6 70 47.1


User provided reference genes

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