Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI54720 Sapria himalayana HOM05D003467 ORTHO05D004220 4.7e-35 150.6 73 100.0
SHI34617 Sapria himalayana HOM05D003467 ORTHO05D004220 7.8e-14 80.1 46 87.0
SHI37961 Sapria himalayana HOM05D003467 ORTHO05D004220 1.7e-13 79.0 43 90.7
SHI40343 Sapria himalayana HOM05D003467 ORTHO05D004220 1.7e-13 79.0 43 90.7
SHI53305 Sapria himalayana HOM05D003467 ORTHO05D004220 1.7e-13 79.0 43 90.7
SHI37556 Sapria himalayana HOM05D003467 ORTHO05D004220 2.9e-13 78.2 41 92.7
SHI46915 Sapria himalayana HOM05D003467 ORTHO05D004220 3.9e-13 77.8 46 84.8
SHI36997 Sapria himalayana HOM05D003467 ORTHO05D004220 8.6e-13 76.6 46 84.8
SHI38786 Sapria himalayana HOM05D003467 ORTHO05D004220 1.1e-12 76.3 43 88.4
SHI36699 Sapria himalayana HOM05D003467 ORTHO05D004220 1.5e-12 75.9 40 92.5
SHI51351 Sapria himalayana HOM05D003467 ORTHO05D004220 1.5e-12 75.9 40 92.5
SHI52927 Sapria himalayana HOM05D003467 ORTHO05D004220 1.5e-12 75.9 46 84.8
Actinidia34926 Actinidia chinensis HOM05D003467 ORTHO05D004220 5.6e-12 73.9 46 84.8
CANSAT16G0031 Cannabis sativa HOM05D003467 ORTHO05D004220 5.6e-12 73.9 46 84.8
ClCG11G007180 Citrullus lanatus HOM05D003467 ORTHO05D004220 5.6e-12 73.9 46 84.8
Dinv06674 Davidia involucrata HOM05D003467 ORTHO05D004220 5.6e-12 73.9 46 84.8
Lj2C1229G12 Lonicera japonica HOM05D003467 ORTHO05D004220 5.6e-12 73.9 46 84.8
Nn1g10002 Nelumbo nucifera HOM05D003467 ORTHO05D004220 5.6e-12 73.9 46 84.8
SHI37886 Sapria himalayana HOM05D003467 ORTHO05D004220 5.6e-12 73.9 42 85.7
Sed0025530 Sechium edule HOM05D003467 ORTHO05D004220 5.6e-12 73.9 46 84.8
Sed0026029 Sechium edule HOM05D003467 ORTHO05D004220 5.6e-12 73.9 46 84.8
SHI38898 Sapria himalayana HOM05D003467 ORTHO05D004220 9.5e-12 73.2 36 97.2
SabraMtG0006300 Salix brachista HOM05D003467 ORTHO05D004220 1.2e-11 72.8 46 82.6
MBI16_g09480_MAGBIO Magnolia biondii HOM05D003467 ORTHO05D004220 2.1e-11 72.0 46 82.6
Sc16g0002730 Simmondsia chinensis HOM05D003467 ORTHO05D004220 2.1e-11 72.0 46 76.1
SGA_v2.0_scaffold255G45505 Striga asiatica HOM05D003467 ORTHO05D004220 2.1e-11 72.0 46 80.4
BolC4t23495H Brassica oleracea HOM05D003467 ORTHO05D004220 2.8e-11 71.6 46 82.6
Aa31csc239G20 Aethionema arabicum HOM05D003467 ORTHO05D004220 3.6e-11 71.2 46 82.6
AT2G07715 Arabidopsis thaliana HOM05D003467 ORTHO05D004220 3.6e-11 71.2 46 82.6
ATMG00560 Arabidopsis thaliana HOM05D003467 ORTHO05D004220 3.6e-11 71.2 46 82.6
BcaC05g26874 Brassica carinata HOM05D003467 ORTHO05D004220 3.6e-11 71.2 46 82.6
BNapus_Darmor_BZH_scaffold_234p00200 Brassica napus HOM05D003467 ORTHO05D004220 3.6e-11 71.2 46 82.6
BolSC28t60347H Brassica oleracea HOM05D003467 ORTHO05D004220 3.6e-11 71.2 46 82.6
BraSC48t46273Z Brassica rapa HOM05D003467 ORTHO05D004220 3.6e-11 71.2 46 82.6
CARHR282930 Cardamine hirsuta HOM05D003467 ORTHO05D004220 3.6e-11 71.2 46 82.6
CDE02G2877 Ceratophyllum demersum HOM05D003467 ORTHO05D004220 3.6e-11 71.2 46 80.4
CsaV3_UNG208190 Cucumis sativus L. HOM05D003467 ORTHO05D004220 3.6e-11 71.2 46 82.6
Sp3g25530 Schrenkiella parvula HOM05D003467 ORTHO05D004220 3.6e-11 71.2 46 82.6
Ciclev10005397m.g Citrus clementina HOM05D003467 ORTHO05D004220 6.1e-11 70.5 46 76.1
SHI38317 Sapria himalayana HOM05D003467 ORTHO05D004220 6.1e-11 70.5 39 89.7
BcaC08g43711 Brassica carinata HOM05D003467 ORTHO05D004220 1.0e-10 69.7 46 80.4
SHI53641 Sapria himalayana HOM05D003467 ORTHO05D004220 1.0e-10 69.7 34 97.1
Solyc00g500103.1 Solanum lycopersicum HOM05D003467 ORTHO05D004220 1.0e-10 69.7 45 82.2
Solyc00g500228.1 Solanum lycopersicum HOM05D003467 ORTHO05D004220 1.0e-10 69.7 45 82.2
PGSC0003DMG401008792 Solanum tuberosum HOM05D003467 ORTHO05D004220 1.0e-10 69.7 45 82.2
EL10Ac6g15561 Beta vulgaris HOM05D003467 ORTHO05D004220 1.4e-10 69.3 46 69.6
SGA_v2.0_scaffold361G49910 Striga asiatica HOM05D003467 ORTHO05D004220 1.4e-10 69.3 41 85.4
AL3G44370 Arabidopsis lyrata HOM05D003467 ORTHO05D004220 3.1e-10 68.2 46 80.4
Ah.04g149890 Amaranthus hybridus HOM05D003467 ORTHO05D004220 4.0e-10 67.8 41 78.0
unitig_87.g27965 Utricularia gibba HOM05D003467 ORTHO05D004220 8.9e-10 66.6 46 78.3
Manes.02G141800 Manihot esculenta HOM05D003467 ORTHO05D004220 1.2e-09 66.2 46 69.6
Rhsim07G0055600 Rhododendron simsii HOM05D003467 ORTHO05D004220 1.2e-09 66.2 43 76.7
Hund13975 Selenicereus undatus HOM05D003467 ORTHO05D004220 1.2e-09 66.2 46 67.4
SHI37209 Sapria himalayana HOM05D003467 ORTHO05D004220 1.5e-09 65.9 34 91.2
Migut.N03022 Erythranthe guttata HOM05D003467 ORTHO05D004220 2.0e-09 65.5 43 74.4
Thhalv10013769m.g Eutrema salsugineum HOM05D003467 ORTHO05D004220 2.6e-09 65.1 46 76.1
CAN.G267.15 Capsicum annuum HOM05D003467 ORTHO05D004220 3.4e-09 64.7 44 77.3
SHI37866 Sapria himalayana HOM05D003467 ORTHO05D004220 3.4e-09 64.7 34 91.2
COL.COLO4_18957 Corchorus olitorius HOM05D003467 ORTHO05D004220 4.4e-09 64.3 46 69.6
CAN.G1572.11 Capsicum annuum HOM05D003467 ORTHO05D004220 7.5e-09 63.5 44 75.0
CAN.G2141.7 Capsicum annuum HOM05D003467 ORTHO05D004220 7.5e-09 63.5 44 75.0
HanXRQChr14g0459301 Helianthus annuus HOM05D003467 ORTHO05D004220 9.8e-09 63.2 43 67.4
ECA238G4840 Erigeron canadensis HOM05D000460 ORTHO05D000333 1.3e-08 62.8 43 67.4
Lsat_1_v5_gn_1_109980 Lactuca sativa HOM05D003467 ORTHO05D004220 1.3e-08 62.8 44 68.2
Lsat_1_v5_gn_6_32340 Lactuca sativa HOM05D003467 ORTHO05D004220 1.3e-08 62.8 43 69.8
Nitab4.5_0009703g0010 Nicotiana tabacum HOM05D003467 ORTHO05D004220 2.2e-08 62.0 46 71.7
Aqoxy4G00639 Aquilegia oxysepala HOM05D003467 ORTHO05D004220 2.9e-08 61.6 43 69.8
Lsat_1_v5_gn_3_11941 Lactuca sativa HOM05D003467 ORTHO05D004220 2.9e-08 61.6 44 68.2
Ca_04056_v3 Cicer arietinum L. HOM05D003467 ORTHO05D004220 3.7e-08 61.2 47 72.3
Lalb_Chr04g0257431 Lupinus albus HOM05D003467 ORTHO05D004220 4.9e-08 60.8 47 70.2
Psat3g204920 Pisum sativum HOM05D003467 ORTHO05D004220 6.4e-08 60.5 47 72.3
Zm00001eb180350 Zea mays HOM05D000540 ORTHO05D000681 1.1e-07 59.7 43 67.4
Nitab4.5_0006602g0040 Nicotiana tabacum HOM05D003467 ORTHO05D004220 1.4e-07 59.3 34 85.3
Lsat_1_v5_gn_2_118881 Lactuca sativa HOM05D003467 ORTHO05D004220 1.9e-07 58.9 43 65.1
Lsat_1_v5_gn_7_88480 Lactuca sativa HOM05D003467 ORTHO05D004220 1.9e-07 58.9 43 65.1
VMungo1383G2739 Vigna mungo HOM05D003467 ORTHO05D004220 2.4e-07 58.5 47 66.0
Lsat_1_v5_gn_1_70701 Lactuca sativa HOM05D003467 ORTHO05D004220 3.2e-07 58.2 43 65.1
Lsat_1_v5_gn_4_83901 Lactuca sativa HOM05D003467 ORTHO05D004220 3.2e-07 58.2 43 65.1
Lsat_1_v5_gn_9_41861 Lactuca sativa HOM05D003467 ORTHO05D004220 3.2e-07 58.2 45 64.4
Lj1g0022622 Lotus japonicus HOM05D003467 ORTHO05D004220 3.2e-07 58.2 44 68.2
Lsat_1_v5_gn_3_78181 Lactuca sativa HOM05D003467 ORTHO05D004220 4.1e-07 57.8 43 65.1
Lsat_1_v5_gn_7_5320 Lactuca sativa HOM05D003467 ORTHO05D004220 4.1e-07 57.8 41 63.4
Nitab4.5_0002558g0130 Nicotiana tabacum HOM05D003467 ORTHO05D004220 5.4e-07 57.4 38 76.3
Glyma.07G149151 Glycine max HOM05D003467 ORTHO05D004220 7.0e-07 57.0 47 63.8
Glyma.08G365200 Glycine max HOM05D003467 ORTHO05D004220 7.0e-07 57.0 47 63.8
Phvul.008G005400 Phaseolus vulgaris HOM05D003467 ORTHO05D004220 9.2e-07 56.6 44 65.9
Atru.chr10.2290 Acer truncatum HOM05D003467 ORTHO05D004220 1.6e-06 55.8 36 77.8
SEGI_40930 Sequoiadendron giganteum HOM05D000540 ORTHO05D000681 1.6e-06 55.8 43 67.4
Lsat_1_v5_gn_5_163900 Lactuca sativa HOM05D003467 ORTHO05D004220 2.7e-06 55.1 41 65.9
Medtr7g007070 Medicago truncatula HOM05D003467 ORTHO05D004220 7.8e-06 53.5 47 66.0


User provided reference genes

Program Settings